CF834934

Overview
NameCF834934
Unique NameCF834934
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length580
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2838 contig Csv1_Contig2838:5..584. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CF834934 vs. ExPASy Swiss-Prot
Match: MPCP_YEAST (Mitochondrial phosphate carrier protein OS=Saccharomyces cerevisiae GN=MIR1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.363e-12
Identity = 38/94 (40.43%), Postives = 55/94 (58.51%), Query Frame = 2 
Query:  299 VVAAPSEPGKIEMYSPAFYAACTVGGILGCGLTHTAVTPLDLVKCNMQIDPVKY-KSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGACKFG 577
            V AAP+ P     YS + Y    + G +GCG TH+++ P+D+VK  +Q++P  Y K +   F  ++  +G      G+ PTLLGYS QGA KFG
Sbjct:    3 VSAAPAIP----QYSVSDYMKFALAGAIGCGSTHSSMVPIDVVKTRIQLEPTVYNKGMVGSFKQIIAGEGAGALLTGFGPTLLGYSIQGAFKFG 92
The following BLAST results are available for this feature:
BLAST of CF834934 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
MPCP_YEAST2.363e-1240.43Mitochondrial phosphate carrier protein OS=Sacchar... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06F23_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06F23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834934 ID=CF834934; Name=CF834934; organism=Citrus sinensis; type=EST; length=580bp
CTTTGCCCGGCTTTATAAGAATTGGAAGCGAGAGACAGGAGGAGGAGAAC
ACCTTTAGAAAATTAGAAGAATTCTCTCTGTCTCGCTCTTTTTCTCTATA
ATTCAATCAAGCTTTTTACTCTCAAACTCAAATTTCAAAAATTCCGAAAT
GGCCCTCACAGAATGGGATAGGAAAAACTCTCTGATACCAAGCTACCTCT
ACTCCTCCCAAACATCCTTCCCGTCCACGGCGGCTTTCAATGGAGCGGCA
GCAGCCGCCACGTCGCCGGCTACTCCATCCACGGCGAGGAGGAGCTTCGT
TGTTGCGGCACCGAGCGAGCCAGGGAAGATAGAGATGTACTCCCCTGCAT
TCTACGCCGCTTGTACCGTCGGCGGGATCCTCGGGTGCGGTCTCACTCAC
ACGGCCGTCACTCCTCTTGACCTCGTCAAGTGCAATATGCAGATTGATCC
TGTTAAGTATAAAAGCATATCATCTGGTTTTGGAGTTTTGCTCAAGGAAC
AGGGAATCAGGGGCTTCTTCAGGGGATGGGTACCTACCTTGCTTGGTTAC
AGCGCCCAAGGTGCTTGCAAGTTTGGATTC
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