CF834956

Overview
NameCF834956
Unique NameCF834956
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length574
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834956 vs. ExPASy Swiss-Prot
Match: PPIE_SCHJA (Peptidyl-prolyl cis-trans isomerase E (Fragment) OS=Schistosoma japonicum PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 8.387e-47
Identity = 92/168 (54.76%), Postives = 114/168 (67.86%), Query Frame = 1
Query:   43 PKLFFDMTVGGQPAGRILMELFADVTPRTADNFRALCTGEKGVGKSGKPLHYKGSSFQRVIPGFMCQXXXXXXXXXXXXKSIYGSKFPDENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTERLDGKHVVFGQVVQGMDVVKAIKKVGSSSGRTNTPVVIAD*GQL 546
            P++FFD+ +G    GRI+MEL +D+ PRTA+NFRALCTG++G G       Y    F RVIP FMCQ            KSIYG KF DENF  +H G G+LSMAN+GP TNGSQFF+CT K + LDGKHVVFG+VV G +VVK ++ VGS SG+   PV I+  G+L
Sbjct:   18 PRVFFDIRIGNADRGRIVMELRSDIVPRTAENFRALCTGDRGFG-------YHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIYGRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGSKSGKVKEPVTISRCGEL 178          
BLAST of CF834956 vs. ExPASy Swiss-Prot
Match: CYPH_YEAST (Peptidyl-prolyl cis-trans isomerase OS=Saccharomyces cerevisiae GN=CPR1 PE=1 SV=3)

HSP 1 Score: 185.652 bits (470), Expect = 1.431e-46
Identity = 91/167 (54.49%), Postives = 112/167 (67.07%), Query Frame = 1
Query:   46 KLFFDMTVGGQPAGRILMELFADVTPRTADNFRALCTGEKGVGKSGKPLHYKGSSFQRVIPGFMCQXXXXXXXXXXXXKSIYGSKFPDENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTERLDGKHVVFGQVVQGMDVVKAIKKVGSSSGRTNTPVVIAD*GQL 546
            +++FD+   GQP GR++ +L+ D+ P+TA+NFRALCTGEKG G       Y GS F RVIP FM Q            KSIYG KFPDENF K H  PG+LSMANAGP TNGSQFF+ T     LDGKHVVFG+VV G D+VK ++ +GS SG T   +V+A  G+L
Sbjct:    3 QVYFDVEADGQPIGRVVFKLYNDIVPKTAENFRALCTGEKGFG-------YAGSPFHRVIPDFMLQGGDFTAGNGTGGKSIYGGKFPDENFKKHHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVVDGYDIVKKVESLGSPSGATKARIVVAKSGEL 162          
BLAST of CF834956 vs. ExPASy Swiss-Prot
Match: PPID_HUMAN (40 kDa peptidyl-prolyl cis-trans isomerase OS=Homo sapiens GN=PPID PE=1 SV=3)

HSP 1 Score: 185.267 bits (469), Expect = 1.868e-46
Identity = 91/170 (53.53%), Postives = 117/170 (68.82%), Query Frame = 1
Query:   40 NPKLFFDMTVGGQPAGRILMELFADVTPRTADNFRALCTGEKGVGKS-GKPLHYKGSSFQRVIPGFMCQXXXXXXXXXXXXKSIYGSKFPDENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTERLDGKHVVFGQVVQGMDVVKAIKKVGSSSGRTNTPVVIAD*GQL 546
            NP++FFD+ +GG+  GRI++ELFAD+ P+TA+NFRALCTGEKG+G + GKPLH+KG  F R+I  FM Q            +SIYG KF DENF  KH   G+LSMANAG  TNGSQFF+ T  T  LDGKHVVFGQV++G+ V + ++ V     +     VIA+ G+L
Sbjct:   15 NPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGHTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSMANAGRNTNGSQFFITTVPTPHLDGKHVVFGQVIKGIGVARILENVEVKGEKPAKLCVIAECGEL 184          
BLAST of CF834956 vs. ExPASy Swiss-Prot
Match: PPIA_CANAL (Peptidyl-prolyl cis-trans isomerase OS=Candida albicans GN=CYP1 PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 2.440e-46
Identity = 93/166 (56.02%), Postives = 113/166 (68.07%), Query Frame = 1
Query:   49 LFFDMTVGGQPAGRILMELFADVTPRTADNFRALCTGEKGVGKSGKPLHYKGSSFQRVIPGFMCQXXXXXXXXXXXXKSIYGSKFPDENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTERLDGKHVVFGQVVQGMDVVKAIKKVGSSSGRTNTPVVIAD*GQL 546
            ++FD++  GQ  G+I  +L+ DV P+TA+NFRALCTGEKG G       YKGS F RVIP FM Q            KSIYG+KF DENFVK+H  PG+LSMANAGP TNGSQFF+ T     LDGKHVVFG+V  G+D+VK I+  GS SG T+  +VI + GQL
Sbjct:    4 VYFDVSADGQKLGKITFKLYDDVVPKTAENFRALCTGEKGFG-------YKGSIFHRVIPQFMLQGGDFTNFNGTGGKSIYGTKFADENFVKRHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVTDGLDIVKKIESFGSGSGATSKKIVIEESGQL 162          
BLAST of CF834956 vs. ExPASy Swiss-Prot
Match: PPID_ASPOR (Peptidyl-prolyl cis-trans isomerase D OS=Aspergillus oryzae GN=cpr6 PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 3.187e-46
Identity = 89/169 (52.66%), Postives = 116/169 (68.64%), Query Frame = 1
Query:   43 PKLFFDMTVGGQPAGRILMELFADVTPRTADNFRALCTGEKGVGKSGKPLHYKGSSFQRVIPGFMCQXXXXXXXXXXXXKSIYGSKFPDENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTERLDGKHVVFGQVVQGMDVVKAIKKVGSSSGRTNTPVVIAD*GQLS 549
            P++FFD+ +G +  GRI +EL   + P+TA+NFRALCTGEKG+GK GKPLH+KGS F RVI  FM Q            +SIYG KFPDENF  KH  P +LSMAN+GPGTNGSQFF+ T  T  LDGKHVVFG+V+ G  VV+ ++ + + + +    V I + G+L+
Sbjct:    8 PRVFFDIQIGNEKTGRIALELV--LVPKTAENFRALCTGEKGMGKQGKPLHFKGSIFHRVIKQFMIQGGDFTAFNGTGGESIYGEKFPDENFELKHDKPFLLSMANSGPGTNGSQFFITTVPTPHLDGKHVVFGEVINGKSVVRKVENMNTQADKPVKDVTIVECGELT 174          
BLAST of CF834956 vs. ExPASy Swiss-Prot
Match: CYPC_YEAST (Peptidyl-prolyl cis-trans isomerase C, mitochondrial OS=Saccharomyces cerevisiae GN=CPR3 PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 7.100e-46
Identity = 95/175 (54.29%), Postives = 114/175 (65.14%), Query Frame = 1
Query:   22 NQSPMPNPKLFFDMTVGGQPAGRILMELFADVTPRTADNFRALCTGEKGVGKSGKPLHYKGSSFQRVIPGFMCQXXXXXXXXXXXXKSIYGSKFPDENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTERLDGKHVVFGQVVQGMDVVKAIKKVGSSSGRTNTPVVIAD*GQL 546
            N +     K+FFD  V G   GRI  EL+ +V P+TA+NFRALCTGEKG G       YKG  F R+IP FM Q            KSIYGSKF DENFVKKH   G+LSMANAGP TNGSQFF+ T     LDGKHVVFG+V +GMD+VKAI+  G++SG+    +VI + G+L
Sbjct:   15 NSASRLGKKVFFDPAVNGTKIGRIEFELYDNVVPKTAENFRALCTGEKGWG-------YKGVPFHRIIPDFMIQGGDTDLTNGFGGKSIYGSKFADENFVKKHDKAGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVTKGMDIVKAIESYGTASGKPRAEIVIEEAGEL 182          
BLAST of CF834956 vs. ExPASy Swiss-Prot
Match: PPID_YARLI (Peptidyl-prolyl cis-trans isomerase D OS=Yarrowia lipolytica GN=CPR6 PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.698e-45
Identity = 90/172 (52.33%), Postives = 115/172 (66.86%), Query Frame = 1
Query:   34 MPNPKLFFDMTVGGQPAGRILMELFADVTPRTADNFRALCTGEKGVGKSGKPLHYKGSSFQRVIPGFMCQXXXXXXXXXXXXKSIYGSKFPDENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTERLDGKHVVFGQVVQGMDVVKAIKKVGS-SSGRTNTPVVIAD*GQL 546
            M NP++FF++ +GG+  G+I  ELFAD  P+TA+NFRALCTGEKG  ++G PLH+KGSSF RVI  FM Q            +SIYG KFPDE F   H  P +LSMANAGP TNGSQFF+ T +T  LD KHVVFG+++ G  +V+ I++  +    R   PV I D G+L
Sbjct:    1 MTNPRVFFEVAIGGKTIGKIYFELFADKVPKTAENFRALCTGEKGNTQAGIPLHFKGSSFHRVIKDFMVQGGDFTAGNGTGGESIYGEKFPDEAFPYPHDQPFLLSMANAGPNTNGSQFFITTTETPHLDNKHVVFGKLLSGKGIVRQIERTETGEQDRPKQPVTIVDCGEL 172          
BLAST of CF834956 vs. ExPASy Swiss-Prot
Match: PPID_DICDI (Peptidyl-prolyl cis-trans isomerase D, mitochondrial OS=Dictyostelium discoideum GN=cypD PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.698e-45
Identity = 93/168 (55.36%), Postives = 113/168 (67.26%), Query Frame = 1
Query:   46 KLFFDMTVGGQPAGRILMELFADVTPRTADNFRALCTGEKGVGKSGKPLHYKGSSFQRVIPGFMCQXXXXXXXXXXXXKSIYGSKFPDENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTERLDGKHVVFGQVVQGMDVVKAIKKVGSS-SGRTNTPVVIAD*GQL 546
            K+FF +  G  P GR++ EL+ D+ P+TA+NFRALCTGEKG+GKSGKPLHYKGSSF RVI  FM Q            +SIYG  F DENF+ KH   G LSMANAG  TNGSQFF+ TA+T  L+G H VFG+VV+G D+VK ++   +  S R     VI D GQL
Sbjct:    8 KVFFQIKQGNTPLGRVVFELYNDIVPKTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIKNFMVQGGDFTHGTGIGGESIYGRTFNDENFLVKHK-IGCLSMANAGKNTNGSQFFITTAETPHLNGGHTVFGEVVEGFDIVKKVENAETDRSDRPKAACVIEDCGQL 174          
BLAST of CF834956 vs. ExPASy Swiss-Prot
Match: PPIE_DROME (Peptidyl-prolyl cis-trans isomerase E OS=Drosophila melanogaster GN=cyp33 PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 3.524e-45
Identity = 93/176 (52.84%), Postives = 115/176 (65.34%), Query Frame = 1
Query:   19 INQSPMPNPKLFFDMTVGGQPAGRILMELFADVTPRTADNFRALCTGEKGVGKSGKPLHYKGSSFQRVIPGFMCQXXXXXXXXXXXXKSIYGSKFPDENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTERLDGKHVVFGQVVQGMDVVKAIKKVGSSSGRTNTPVVIAD*GQL 546
            I ++   NP++FFD+ +GG  AGRI+M L ADV P+TA+NFR LCT E+G G       YKG SF RVIP FMCQ            KSIYG KF DENF  KH   G LSMAN+G  TNGSQFF+CT KT+ LD KHVVFG V+ G +VV+ +++ GS SG  +  +VI   G+L
Sbjct:  131 IEKAEKRNPQVFFDIRIGGNDAGRIVMLLRADVVPKTAENFRQLCTHEQGYG-------YKGCSFHRVIPEFMCQGGDFTNNNGTGGKSIYGKKFNDENFNLKHNSFGTLSMANSGANTNGSQFFICTTKTDWLDNKHVVFGHVISGAEVVRKMERCGSKSGTPSQKIVIYSCGEL 299          
BLAST of CF834956 vs. ExPASy Swiss-Prot
Match: PPIH_NEUCR (Peptidyl-prolyl cis-trans isomerase H OS=Neurospora crassa GN=cyp-3 PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 4.602e-45
Identity = 95/173 (54.91%), Postives = 113/173 (65.32%), Query Frame = 1
Query:   40 NPKLFFDMTVGGQPAGRILMELFADVTPRTADNFRALCTGEKGVGKSGKPLHYKGSSFQRVIPGFMCQXXXXXXXXXXXXKSIYGSK-FPDENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTERLDGKHVVFGQVVQGMDVVKAIKKVGSSSGRTNTP---VVIAD*GQL 546
            NP +FFD+T+GG+P GRI  ELF DV PRTA+NFR  CTGE      G+P  YKGS F R+IP FMCQ              IYG+K F DENF+ KH  PG+LSMANAGP TNGSQFF+ T  T  LDGKHVVFG+VV GMDVVK ++   +     + P   VVIA  G++
Sbjct:   11 NPLVFFDITLGGEPLGRITFELFKDVVPRTAENFRQFCTGESK-NNLGRPQGYKGSKFHRIIPNFMCQGGDFLNGDGTGSTCIYGTKSFADENFLLKHDTPGLLSMANAGPNTNGSQFFITTVPTPFLDGKHVVFGKVVDGMDVVKKMENTKTGYRGKDVPNLDVVIAQCGEM 182          
The following BLAST results are available for this feature:
BLAST of CF834956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
PPIE_SCHJA8.387e-4754.76Peptidyl-prolyl cis-trans isomerase E (Fragment) O... [more]
CYPH_YEAST1.431e-4654.49Peptidyl-prolyl cis-trans isomerase OS=Saccharomyc... [more]
PPID_HUMAN1.868e-4653.5340 kDa peptidyl-prolyl cis-trans isomerase OS=Homo... [more]
PPIA_CANAL2.440e-4656.02Peptidyl-prolyl cis-trans isomerase OS=Candida alb... [more]
PPID_ASPOR3.187e-4652.66Peptidyl-prolyl cis-trans isomerase D OS=Aspergill... [more]
CYPC_YEAST7.100e-4654.29Peptidyl-prolyl cis-trans isomerase C, mitochondri... [more]
PPID_YARLI2.698e-4552.33Peptidyl-prolyl cis-trans isomerase D OS=Yarrowia ... [more]
PPID_DICDI2.698e-4555.36Peptidyl-prolyl cis-trans isomerase D, mitochondri... [more]
PPIE_DROME3.524e-4552.84Peptidyl-prolyl cis-trans isomerase E OS=Drosophil... [more]
PPIH_NEUCR4.602e-4554.91Peptidyl-prolyl cis-trans isomerase H OS=Neurospor... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06G19_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06G19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834956 ID=CF834956; Name=CF834956; organism=Citrus sinensis; type=EST; length=574bp
TTTGTTGTTTTCTCTCCAATCAACCAATCCCCAATGCCAAACCCCAAATT
GTTCTTCGACATGACCGTCGGCGGACAGCCGGCCGGGAGGATCTTGATGG
AGCTCTTCGCCGATGTCACCCCCCGAACCGCAGATAACTTCCGCGCCCTC
TGCACCGGCGAGAAAGGCGTCGGCAAGTCCGGCAAGCCTCTCCACTACAA
AGGCTCGTCCTTCCAACGTGTGATCCCCGGATTCATGTGCCAGGGGGGAG
ACTTCACCGCCGGAAACGGAACCGGAGGCAAATCAATCTACGGCTCGAAA
TTCCCCGATGAGAACTTCGTGAAGAAGCACACCGGCCCCGGAATCCTCTC
CATGGCGAATGCCGGACCCGGAACCAACGGATCTCAATTCTTCGTCTGTA
CGGCCAAGACCGAGAGGCTCGATGGGAAGCACGTTGTGTTCGGGCAGGTC
GTCCAAGGGATGGACGTCGTCAAGGCCATCAAGAAAGTGGGGTCCAGCTC
CGGCAGGACCAACACGCCCGTCGTGATCGCTGATTGAGGTCAATTGTCTT
AGATTTGATCATGATAATGATCGC
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