CF834956

Overview
NameCF834956
Unique NameCF834956
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length574
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834956 vs. ExPASy Swiss-Prot
Match: CYP11_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp11 OS=Rhizopus oryzae GN=cyp11 PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 4.602e-45
Identity = 94/173 (54.34%), Postives = 118/173 (68.21%), Query Frame = 1
Query:   34 MPNPKLFFDMTVGGQPAGRILMELFADVTPRTADNFRALCTGEKGVGK-SGKPLHYKGSSFQRVIPGFMCQXXXXXXXXXXXXKSIYGSKFPDENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTERLDGKHVVFGQVVQGMDVVKAIK-KVGSSSGRTNTPVVIAD*GQL 546
            M NP++FFD+ V G   GRI++ELFAD  P+TA+NFRALCTGEKG+GK S  PLHYKGS F R+I GFMCQ            +SIYG+ FPDE+F +KH   G+LSMAN GP T  SQFF+ T  T  LDGKHVVFG+VV G +VV+ ++ +      R    V+IA+ G+L
Sbjct:    1 MINPRVFFDIDVDGNRIGRIVIELFADQVPKTAENFRALCTGEKGIGKVSNMPLHYKGSIFHRIIKGFMCQGGDFTHRTGKGGESIYGANFPDESFSRKHDTHGLLSMANRGPNTQTSQFFITTRPTPHLDGKHVVFGRVVSGYNVVEMMENEPVDDQDRPLHNVMIANCGEL 173          
BLAST of CF834956 vs. ExPASy Swiss-Prot
Match: PPID_DEBHA (Peptidyl-prolyl cis-trans isomerase D OS=Debaryomyces hansenii GN=CPR6 PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.339e-44
Identity = 90/172 (52.33%), Postives = 116/172 (67.44%), Query Frame = 1
Query:   43 PKLFFDMTVGGQPAGRILMELFADVTPRTADNFRALCTGEKGVGKS-GKPLHYKGSSFQRVIPGFMCQXXXXXXXXXXXXKSIYGSKFPDENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTERLDGKHVVFGQVVQGMDVVKAIKKVGSSSGRTNTPV---VIAD*GQL 546
            PK+FFD++  G+P GR++ EL+ DV P+TA+NFRALCTGEKG  +S GK LHYKGS F R+I  FMCQ            +SIYG KF DENF   H  P +LSMANAG  TNGSQFF+ T  T  L+GKHVVFG+V+QG  +V+ +++     G  + PV   +I+D G+L
Sbjct:    8 PKVFFDISADGKPKGRVVFELYNDVVPKTAENFRALCTGEKGASESSGKQLHYKGSIFHRIIKDFMCQGGDFTHGSGIGGESIYGEKFEDENFQLTHDKPFLLSMANAGANTNGSQFFITTVPTPHLNGKHVVFGEVIQGKSIVRQLER--CDKGENDKPVEDWIISDCGEL 177          
BLAST of CF834956 vs. ExPASy Swiss-Prot
Match: CYP40_ARATH (Peptidyl-prolyl cis-trans isomerase CYP40 OS=Arabidopsis thaliana GN=CYP40 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.339e-44
Identity = 92/173 (53.18%), Postives = 117/173 (67.63%), Query Frame = 1
Query:   34 MPNPKLFFDMTVGGQPAGRILMELFADVTPRTADNFRALCTGEKGVG-KSGKPLHYKGSSFQRVIPGFMCQXXXXXXXXXXXXKSIYGSKFPDENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTERLDGKHVVFGQVVQGMDVVKAIKKVG-SSSGRTNTPVVIAD*GQL 546
            M   K F D+++GG+  GRI++EL+ DV P+TA+NFR LCTGEKG+G  +G PLHYKG+ F RVI GFM Q            +SIYG KF DENF  KH   G+LSMAN+GP TNGSQFF+ T +T  LDGKHVVFG+V +GM VV++I+ V        +  VVI D G++
Sbjct:    1 MGRSKCFMDISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNRFHRVIKGFMIQGGDISANDGTGGESIYGLKFDDENFELKHERKGMLSMANSGPNTNGSQFFITTTRTSHLDGKHVVFGRVTKGMGVVRSIEHVSIEEQSCPSQDVVIHDCGEI 173          
BLAST of CF834956 vs. ExPASy Swiss-Prot
Match: RBP2_BOVIN (E3 SUMO-protein ligase RANBP2 (Fragment) OS=Bos taurus GN=RANBP2 PE=2 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 2.284e-44
Identity = 90/169 (53.25%), Postives = 109/169 (64.50%), Query Frame = 1
Query:   40 NPKLFFDMTVGGQPAGRILMELFADVTPRTADNFRALCTGEKGVGKSGKPLHYKGSSFQRVIPGFMCQXXXXXXXXXXXXKSIYGSKFPDENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTERLDGKHVVFGQVVQGMDVVKAIKKVGSSSGRTNTPVVIAD*GQL 546
            NP +FFD+    +P GRI MELF+++ P+TA+NFRALCTGEKG G       +K S F RVIP F+CQ            +SIYG KF DENF  KHTGPG+LSMAN G  TN SQFF+   K ERLD KHVVFG V  GMD VK I+  GS  G  +  ++I + GQ+
Sbjct:  924 NPVVFFDICADDEPLGRITMELFSNIVPKTAENFRALCTGEKGFG-------FKSSIFHRVIPDFVCQGGDITKHDGTGGRSIYGDKFEDENFDVKHTGPGLLSMANRGQDTNNSQFFITLKKAERLDFKHVVFGFVKDGMDTVKKIESFGSPKGSVSRRIIITECGQI 1085          
BLAST of CF834956 vs. ExPASy Swiss-Prot
Match: CP20B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-2, chloroplastic OS=Arabidopsis thaliana GN=CYP20-2 PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.284e-44
Identity = 95/171 (55.56%), Postives = 116/171 (67.84%), Query Frame = 1
Query:   46 KLFFDMTVG---GQPAGRILMELFADVTPRTADNFRALCTGEKGVGKSGKPLHYKGSSFQRVIPGFMCQXXXXXXXXXXXXKSIYGSKFPDENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTERLDGKHVVFGQVVQGMDVVKAIKKVGSSSG-RTNTPVVIAD*GQL 546
            K++FD++VG   G+ AGRI++ L+ D  P+T +NFRALCTGEKG G       YKGS+F RVI  FM Q            KS+YG  F DENF   H GPG+LSMANAGP TNGSQFF+CT KT  LDG+HVVFGQV++GM+VVK I++  +  G R    VVIAD GQL
Sbjct:   91 KVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFG-------YKGSTFHRVIRDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVVFGQVIEGMEVVKLIEEQETDRGDRPRKKVVIADCGQL 254          
BLAST of CF834956 vs. ExPASy Swiss-Prot
Match: PPIH_EMENI (Peptidyl-prolyl cis-trans isomerase H OS=Emericella nidulans GN=cyp3 PE=3 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 3.896e-44
Identity = 90/179 (50.28%), Postives = 117/179 (65.36%), Query Frame = 1
Query:   13 SPINQSPMPNPKLFFDMTVGGQPAGRILMELFADVTPRTADNFRALCTGEKGVGKSGKPLHYKGSSFQRVIPGFMCQXXXXXXXXXXXXKSIYGS-KFPDENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTERLDGKHVVFGQVVQGMDVVKAIKKVGSSSGRTNTPVVIAD*GQL 546
            S + Q+   NP +FFD+ +GG+P GR+ +ELFADVTPRTA+NFR  CTGE    + G+P  YKGS F RVI  FM Q             +IYG+ KF DENF  +H  PG+LSMAN+GP TNG QFF+ T  T  L+GKHVVFGQV+ GMD+V+ I+   ++  + N  VVI   G++
Sbjct:    6 SAVPQTTSSNPIVFFDVALGGEPLGRLKLELFADVTPRTAENFRQFCTGESK-NQQGRPQGYKGSKFHRVIKDFMIQGGDFVNGDGTGSCTIYGTPKFSDENFTLRHDRPGLLSMANSGPNTNGCQFFITTTATPFLNGKHVVFGQVIDGMDIVRMIENTRTTRDKPNQDVVIIQCGEM 183          
BLAST of CF834956 vs. ExPASy Swiss-Prot
Match: PPIA2_RHIOR (Peptidyl-prolyl cis-trans isomerase A2 OS=Rhizopus oryzae GN=cyp1 PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 3.896e-44
Identity = 91/166 (54.82%), Postives = 110/166 (66.27%), Query Frame = 1
Query:   49 LFFDMTVGGQPAGRILMELFADVTPRTADNFRALCTGEKGVGKSGKPLHYKGSSFQRVIPGFMCQXXXXXXXXXXXXKSIYGSKFPDENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTERLDGKHVVFGQVVQGMDVVKAIKKVGSSSGRTNTPVVIAD*GQL 546
            ++FD+++ G+PAGRI  +LF DV P+TA NFRALCTGE+G G       YKGS F RVIP FM Q            KSIYG KF DENF  KH+ PG+LSMANAGP TNGSQFF+ T     LDG HVVFG+V + M++V  I+ +GS+SG     VVI D G L
Sbjct:    3 VYFDISIDGKPAGRIEFQLFEDVVPKTAKNFRALCTGEQGFG-------YKGSKFHRVIPQFMLQGGDFTRGDGTGGKSIYGEKFADENFKLKHSEPGLLSMANAGPNTNGSQFFITTVPCSWLDGAHVVFGKVTKNMELVSKIESLGSASGAVKAKVVIEDCGVL 161          
BLAST of CF834956 vs. ExPASy Swiss-Prot
Match: RBP2_MOUSE (E3 SUMO-protein ligase RANBP2 OS=Mus musculus GN=Ranbp2 PE=1 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 5.088e-44
Identity = 89/169 (52.66%), Postives = 109/169 (64.50%), Query Frame = 1
Query:   40 NPKLFFDMTVGGQPAGRILMELFADVTPRTADNFRALCTGEKGVGKSGKPLHYKGSSFQRVIPGFMCQXXXXXXXXXXXXKSIYGSKFPDENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTERLDGKHVVFGQVVQGMDVVKAIKKVGSSSGRTNTPVVIAD*GQL 546
            NP +FFD+   G+P GRI+MELF+++ P+TA+NFRALCTGEKG G       +K S F RV+P F+CQ            +SIYG KF DENF  KHTGPG+LSMAN G  TN SQFF+   K E LD KHVVFG V  GMD V+ I+  GS  G  +  + I + GQL
Sbjct: 2892 NPVVFFDVCADGEPLGRIIMELFSNIVPQTAENFRALCTGEKGFG-------FKNSIFHRVVPDFICQGGDITKYNGTGGQSIYGDKFDDENFDLKHTGPGLLSMANYGQNTNSSQFFITLKKAEHLDFKHVVFGFVKDGMDTVRKIESFGSPKGSVSRRICITECGQL 3053          
BLAST of CF834956 vs. ExPASy Swiss-Prot
Match: CP20C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic OS=Arabidopsis thaliana GN=CYP20-3 PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 8.679e-44
Identity = 86/146 (58.90%), Postives = 104/146 (71.23%), Query Frame = 1
Query:   46 KLFFDMTVGGQPAGRILMELFADVTPRTADNFRALCTGEKGVGKSGKPLHYKGSSFQRVIPGFMCQXXXXXXXXXXXXKSIYGSKFPDENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTERLDGKHVVFGQVVQGMDVVKAIK 483
            K++FD+ +GG+ AGRI+M LF +V P+T +NFRALCTGEK  G       YKGSSF R+I  FM Q             SIYG+KF DENF  KHTGPGILSMANAGP TNGSQFF+CT KT  LD KHVVFGQV++GM +V+ ++
Sbjct:   96 KVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYG-------YKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDNKHVVFGQVIEGMKLVRTLE 234          
BLAST of CF834956 vs. ExPASy Swiss-Prot
Match: PPIB_CRYNE (Peptidyl-prolyl cis-trans isomerase B OS=Cryptococcus neoformans GN=CPR2 PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.134e-43
Identity = 92/175 (52.57%), Postives = 117/175 (66.86%), Query Frame = 1
Query:   25 QSPMPNPKLFFDMTVGGQPAGRILMELFADVTPRTADNFRALCTGEKGVGKSGKPLHYKGSSFQRVIPGFMCQXXXXXXXXXXXXKSIYGSKFPDENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTERLDGKHVVFGQVVQGMDVVKAIKKVGSSSG-RTNTPVVIAD*GQL 546
            + P+   K++FD+  GG+P GRI+M L+    P+TA+NFRAL TG+   G+      Y+GSSF R+I  FM Q            KSIYGSKFPDENF  KHTGPG+LSMANAG  TNGSQFF+CT KT  LD +HVVFG V++GMDVV A++ V +S G +   P+ IA  G+L
Sbjct:   39 KGPVITNKVYFDIEHGGKPLGRIVMGLYGKTVPKTAENFRALATGKNSDGED-LGYGYEGSSFHRIIKNFMIQGGDFTKGDGTGGKSIYGSKFPDENFKLKHTGPGVLSMANAGRDTNGSQFFICTVKTAWLDNRHVVFGHVLEGMDVVYAMENVKTSRGDKPVEPITIAASGEL 212          
The following BLAST results are available for this feature:
BLAST of CF834956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
CYP11_RHIOR4.602e-4554.34Peptidyl-prolyl cis-trans isomerase cyp11 OS=Rhizo... [more]
PPID_DEBHA1.339e-4452.33Peptidyl-prolyl cis-trans isomerase D OS=Debaryomy... [more]
CYP40_ARATH1.339e-4453.18Peptidyl-prolyl cis-trans isomerase CYP40 OS=Arabi... [more]
RBP2_BOVIN2.284e-4453.25E3 SUMO-protein ligase RANBP2 (Fragment) OS=Bos ta... [more]
CP20B_ARATH2.284e-4455.56Peptidyl-prolyl cis-trans isomerase CYP20-2, chlor... [more]
PPIH_EMENI3.896e-4450.28Peptidyl-prolyl cis-trans isomerase H OS=Emericell... [more]
PPIA2_RHIOR3.896e-4454.82Peptidyl-prolyl cis-trans isomerase A2 OS=Rhizopus... [more]
RBP2_MOUSE5.088e-4452.66E3 SUMO-protein ligase RANBP2 OS=Mus musculus GN=R... [more]
CP20C_ARATH8.679e-4458.90Peptidyl-prolyl cis-trans isomerase CYP20-3, chlor... [more]
PPIB_CRYNE1.134e-4352.57Peptidyl-prolyl cis-trans isomerase B OS=Cryptococ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06G19_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06G19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834956 ID=CF834956; Name=CF834956; organism=Citrus sinensis; type=EST; length=574bp
TTTGTTGTTTTCTCTCCAATCAACCAATCCCCAATGCCAAACCCCAAATT
GTTCTTCGACATGACCGTCGGCGGACAGCCGGCCGGGAGGATCTTGATGG
AGCTCTTCGCCGATGTCACCCCCCGAACCGCAGATAACTTCCGCGCCCTC
TGCACCGGCGAGAAAGGCGTCGGCAAGTCCGGCAAGCCTCTCCACTACAA
AGGCTCGTCCTTCCAACGTGTGATCCCCGGATTCATGTGCCAGGGGGGAG
ACTTCACCGCCGGAAACGGAACCGGAGGCAAATCAATCTACGGCTCGAAA
TTCCCCGATGAGAACTTCGTGAAGAAGCACACCGGCCCCGGAATCCTCTC
CATGGCGAATGCCGGACCCGGAACCAACGGATCTCAATTCTTCGTCTGTA
CGGCCAAGACCGAGAGGCTCGATGGGAAGCACGTTGTGTTCGGGCAGGTC
GTCCAAGGGATGGACGTCGTCAAGGCCATCAAGAAAGTGGGGTCCAGCTC
CGGCAGGACCAACACGCCCGTCGTGATCGCTGATTGAGGTCAATTGTCTT
AGATTTGATCATGATAATGATCGC
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