CF834962

Overview
NameCF834962
Unique NameCF834962
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length605
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF834962 vs. ExPASy Swiss-Prot
Match: GLRX_PSEAE (Glutaredoxin OS=Pseudomonas aeruginosa GN=grx PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.891e-11
Identity = 32/83 (38.55%), Postives = 51/83 (61.45%), Query Frame = 3 
Query:  114 VVAFSKTFCPFCVSGRELFQQLGVTFKAIELNKESDGSDIQSALAEWTGQKTVPNVFIGGKHIGGCDSTTALHREGKLVPLLT 362
            VV ++  +CP+C+  ++L Q+ GV F+ I  + + +   +++ LA   G  TVP ++IG  H+GGCD   AL R GKL  LL+
Sbjct:    4 VVIYTTAWCPYCIRAKQLLQRKGVDFQEIACDGKPE---LRAELARKAGSTTVPQIWIGETHVGGCDDLHALERAGKLDALLS 83
The following BLAST results are available for this feature:
BLAST of CF834962 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
GLRX_PSEAE4.891e-1138.55Glutaredoxin OS=Pseudomonas aeruginosa GN=grx PE=3... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06H02_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834962 ID=CF834962; Name=CF834962; organism=Citrus sinensis; type=EST; length=605bp
TACATCATATAGGATTTGAAGNTNATTTAGGGTTTGTGAGATTTCCCCTC
AAAGACAAAGAAGACACAGAAATGGCTTTGCCCAAGGCCCAGGAAACCGT
TTCCTCCAATTCCGTCGTCGCTTTCAGCAAAACGTTTTGTCCGTTCTGCG
TGAGTGGCAGAGAGCTGTTTCAGCAACTCGGAGTCACTTTCAAGGCCATT
GAACTGAACAAAGAAAGTGATGGAAGTGACATTCAATCAGCTCTAGCTGA
GTGGACTGGACAGAAAACTGTTCCAAATGTCTTCATCGGAGGGAAACACA
TTGGTGGCTGCGATTCAACTACTGCACTGCACAGGGAAGGGAAGCTGGTT
CCTCTGCTCACTGAAGCTGGAGCTGTGGGCAAGACATCTGCCTGATGGAT
GGCTATTGTCTGCCTGTTAATTCTAGTAATAAATAAAGAATGTGTTGGTA
GTGCTTAATCTGTCTGAATTAAACATGAAATTATGCTTATTTGAGTAATT
TCCAATGCACTTTTTTGTTCAGTTTCTGTTTTATGTTGAAATCTGTATGA
ATTTTATCAGATTTTTCATCTACTATATCCATGTAGAGTCATTTCTACTG
TAAAA
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