CF834965

Overview
NameCF834965
Unique NameCF834965
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7791 contig Csv1_Contig7791:91..843. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834965 vs. ExPASy Swiss-Prot
Match: EF1A_ASPOR (Elongation factor 1-alpha OS=Aspergillus oryzae GN=tef1 PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.581e-50
Identity = 91/130 (70.00%), Postives = 116/130 (89.23%), Query Frame = -3
Query:  362 NVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEK 751
            NV+VK+++RG VA +SK+DP     +F +QVI++NHPGQ+GNGYAPVLDCHT+HIA KF+EL+ KIDRR+GK +E +PKF+K+GDA +VKMIP+KPM VE+F+D+PPLGRFAVRDMRQTVAVGVIK+VEK
Sbjct:  313 NVSVKEVRRGNVAGDSKNDPPAGCDSFNAQVIVLNHPGQVGNGYAPVLDCHTAHIACKFAELLEKIDRRTGKSVEDKPKFIKSGDAAIVKMIPSKPMCVESFTDFPPLGRFAVRDMRQTVAVGVIKSVEK 442          
BLAST of CF834965 vs. ExPASy Swiss-Prot
Match: EF1A_AJECG (Elongation factor 1-alpha OS=Ajellomyces capsulata (strain ATCC 26029 / G186AR / H82 / RMSCC 2432) GN=TEF PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.581e-50
Identity = 91/132 (68.94%), Postives = 114/132 (86.36%), Query Frame = -3
Query:  356 NVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKD 751
            NV+VK+++RG VA +SK+DP +   +F +QVI++NHPGQ+G GYAPVLDCHT+HIA KFSEL+ KIDRR+GK +E  PKF+K+GDA +VKM+P+KPM VE F+DYPPLGRFAVRDMRQTVAVGVIK+V K D
Sbjct:  313 NVSVKEVRRGNVAGDSKNDPPKGCESFNAQVIVLNHPGQVGAGYAPVLDCHTAHIACKFSELIEKIDRRTGKSVENNPKFIKSGDAAIVKMVPSKPMCVEPFTDYPPLGRFAVRDMRQTVAVGVIKSVIKSD 444          
BLAST of CF834965 vs. ExPASy Swiss-Prot
Match: EF1A_PODCU (Elongation factor 1-alpha OS=Podospora curvicolla GN=TEF PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.676e-50
Identity = 92/130 (70.77%), Postives = 115/130 (88.46%), Query Frame = -3
Query:  362 NVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEK 751
            NV+VK+++RG VA +SK+DP   AA+F +QVI++NHPGQ+G GYAPVLDCHT+HIA KF+EL+ KIDRR+GK +E+ PKF+K+GDA +VKMIP+KPM VE F++YPPLGRFAVRDMRQTVAVGVIK VEK
Sbjct:  313 NVSVKEIRRGNVAGDSKNDPPLGAASFDAQVIVLNHPGQVGAGYAPVLDCHTAHIACKFAELLQKIDRRTGKAVEESPKFIKSGDAAIVKMIPSKPMCVEAFTEYPPLGRFAVRDMRQTVAVGVIKKVEK 442          
BLAST of CF834965 vs. ExPASy Swiss-Prot
Match: EF1A_PUCGR (Elongation factor 1-alpha OS=Puccinia graminis GN=TEF PE=3 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 6.108e-50
Identity = 93/132 (70.45%), Postives = 113/132 (85.61%), Query Frame = -3
Query:  356 NVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKD 751
            NV+VKD++RG V  ++K DP +EAA+F +QVI++NHPGQIGNGY PVLDCHT+HIA KF  L  KIDRR+GK LE+ PKF+K+GDA +VKM+P+K M VE F+DYPPLGRFAVRDMRQTVAVGVIK+VEK D
Sbjct:  311 NVSVKDIRRGNVCGDTKCDPPKEAASFVAQVIVLNHPGQIGNGYCPVLDCHTAHIACKFDTLQQKIDRRTGKALEEAPKFVKSGDACLVKMVPSKAMCVEPFADYPPLGRFAVRDMRQTVAVGVIKSVEKTD 442          
BLAST of CF834965 vs. ExPASy Swiss-Prot
Match: EF1A_ARTSA (Elongation factor 1-alpha OS=Artemia salina PE=1 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 6.108e-50
Identity = 90/133 (67.67%), Postives = 115/133 (86.47%), Query Frame = -3
Query:  353 NVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKDP 751
            NV+VK+L+RG+VAS+SK++PAR + +F +QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K DRR+GK  E EPKF+K+GDA M+ ++P+KP+ VE FSD+PPLGRFAVRDMRQTVAVGVIK+V  KDP
Sbjct:  314 NVSVKELRRGYVASDSKNNPARGSQDFFAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEAEPKFIKSGDAAMITLVPSKPLCVEAFSDFPPLGRFAVRDMRQTVAVGVIKSVNFKDP 446          
BLAST of CF834965 vs. ExPASy Swiss-Prot
Match: EF1A_CANAL (Elongation factor 1-alpha OS=Candida albicans GN=TEF1 PE=1 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.042e-49
Identity = 91/132 (68.94%), Postives = 113/132 (85.61%), Query Frame = -3
Query:  356 NVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKD 751
            NV+VK+++RG V  +SK+DP +   +F +QVI++NHPGQI  GY+PVLDCHT+HIA KF  LV KIDRR+GK+LE+ PKF+K+GDA +VKM+PTKPM VE F+DYPPLGRFAVRDMRQTVAVGVIK+VEK D
Sbjct:  312 NVSVKEIRRGNVCGDSKNDPPKGCDSFNAQVIVLNHPGQISAGYSPVLDCHTAHIACKFDTLVEKIDRRTGKKLEENPKFVKSGDAAIVKMVPTKPMCVEAFTDYPPLGRFAVRDMRQTVAVGVIKSVEKSD 443          
BLAST of CF834965 vs. ExPASy Swiss-Prot
Match: EF1A_ARXAD (Elongation factor 1-alpha OS=Arxula adeninivorans GN=TEF PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.042e-49
Identity = 92/132 (69.70%), Postives = 114/132 (86.36%), Query Frame = -3
Query:  356 NVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKD 751
            NV+VK+++RG VA +SK+DP +   +FT+QVII NHPGQI  GY+PVLDCHT+HIA +F EL+ KIDRRSGK++E  PKF+K GDA +V+MIP+KPM VETF++YPPLGRFAVRDMRQTVAVGVIK+VEK D
Sbjct:  312 NVSVKEIRRGNVAGDSKNDPPKGCDSFTAQVIIFNHPGQISAGYSPVLDCHTAHIACRFDELIEKIDRRSGKKVEDSPKFVKAGDAAIVRMIPSKPMCVETFTEYPPLGRFAVRDMRQTVAVGVIKSVEKSD 443          
BLAST of CF834965 vs. ExPASy Swiss-Prot
Match: EF1A2_SCHPO (Elongation factor 1-alpha-B/C OS=Schizosaccharomyces pombe GN=tef1b PE=1 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.959e-49
Identity = 92/133 (69.17%), Postives = 113/133 (84.96%), Query Frame = -3
Query:  353 NVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKDP 751
            NV+VKD++RG V  +SK+DP    A+FT+QVII+NHPGQI  GY+PVLDCHT+HIA KF+EL+ KIDRRSGK++E+ PKF+K+GDA + KM+P+KPM VE F+DY PLGRFAVRDMRQTVAVGVIK VEK  P
Sbjct:  312 NVSVKDIRRGNVCGDSKNDPPMGCASFTAQVIILNHPGQISAGYSPVLDCHTAHIACKFAELIEKIDRRSGKKIEESPKFVKSGDACIAKMVPSKPMCVEAFTDYAPLGRFAVRDMRQTVAVGVIKAVEKVAP 444          
BLAST of CF834965 vs. ExPASy Swiss-Prot
Match: EF1A1_SCHPO (Elongation factor 1-alpha-A OS=Schizosaccharomyces pombe GN=tef1a PE=1 SV=2)

HSP 1 Score: 194.897 bits (494), Expect = 3.959e-49
Identity = 92/133 (69.17%), Postives = 113/133 (84.96%), Query Frame = -3
Query:  353 NVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKDP 751
            NV+VKD++RG V  +SK+DP    A+FT+QVII+NHPGQI  GY+PVLDCHT+HIA KF+EL+ KIDRRSGK++E+ PKF+K+GDA + KM+P+KPM VE F+DY PLGRFAVRDMRQTVAVGVIK VEK  P
Sbjct:  312 NVSVKDIRRGNVCGDSKNDPPMGCASFTAQVIILNHPGQISAGYSPVLDCHTAHIACKFAELIEKIDRRSGKKIEESPKFVKSGDACIAKMVPSKPMCVEAFTDYAPLGRFAVRDMRQTVAVGVIKAVEKVAP 444          
BLAST of CF834965 vs. ExPASy Swiss-Prot
Match: EF1A_PICGU (Elongation factor 1-alpha OS=Pichia guilliermondii GN=TEF1 PE=3 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 5.170e-49
Identity = 89/132 (67.42%), Postives = 113/132 (85.61%), Query Frame = -3
Query:  356 NVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKD 751
            NV+VK+++RG V  +SK+DP +   +FT+QVI++NHPGQI  GY+PVLDCHT+HIA KF  L+ KIDRR+GK++E  PKF+K+GDA +VKM+P+KPM VE F+DYPPLGRFAVRDMRQTVAVGVIK+VEK D
Sbjct:  312 NVSVKEIRRGNVCGDSKNDPPKGCDSFTAQVIVLNHPGQISAGYSPVLDCHTAHIACKFDTLLEKIDRRTGKKMEDNPKFVKSGDASIVKMVPSKPMCVEAFTDYPPLGRFAVRDMRQTVAVGVIKSVEKSD 443          
The following BLAST results are available for this feature:
BLAST of CF834965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 171
Match NameE-valueIdentityDescription
EF1A_ASPOR3.581e-5070.00Elongation factor 1-alpha OS=Aspergillus oryzae GN... [more]
EF1A_AJECG3.581e-5068.94Elongation factor 1-alpha OS=Ajellomyces capsulata... [more]
EF1A_PODCU4.676e-5070.77Elongation factor 1-alpha OS=Podospora curvicolla ... [more]
EF1A_PUCGR6.108e-5070.45Elongation factor 1-alpha OS=Puccinia graminis GN=... [more]
EF1A_ARTSA6.108e-5067.67Elongation factor 1-alpha OS=Artemia salina PE=1 S... [more]
EF1A_CANAL1.042e-4968.94Elongation factor 1-alpha OS=Candida albicans GN=T... [more]
EF1A_ARXAD1.042e-4969.70Elongation factor 1-alpha OS=Arxula adeninivorans ... [more]
EF1A2_SCHPO3.959e-4969.17Elongation factor 1-alpha-B/C OS=Schizosaccharomyc... [more]
EF1A1_SCHPO3.959e-4969.17Elongation factor 1-alpha-A OS=Schizosaccharomyces... [more]
EF1A_PICGU5.170e-4967.42Elongation factor 1-alpha OS=Pichia guilliermondii... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06H05_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834965 ID=CF834965; Name=CF834965; organism=Citrus sinensis; type=EST; length=753bp
CCCCGAGTTTTTTTTTTTTTTTTGACCATCAAAAACAGTCGCCCATTCTC
TCACCGCTAAATTTAATACAACACCTACAAAATATATGAGCACCGACTAA
ATTTTCAAAATCGAGCACTAACGGCTAATCTTGAAACAAAATGTTTGACA
TCCAAAAACTGGTTTATCAACTTACCAAAAAAAAACTCTGATATAAAACC
AAATTCAGAGAATTAAAATGAAGTCCCGTAAAACAAACTAAAACACGACA
AAAATAGCATAAACAGAGAAAATAAAAGCTAACTATAGCAGATAGATCCC
AAAAAACTCCTCACTTCTTCTTGGCTGCAGACTTGGTGACCTTGGCACCT
GTTGGATCCTTCTTTTCAACATTCTTAATCACACCAACAGCAACAGTCTG
ACGCATGTCCCTAACGGCAAAACGACCAAGAGGTGGGTAGTCAGAGAAGG
TTTCAACAACCATGGGCTTGGTGGGAATCATCTTAACCATTCCAGCATCT
CCATTCTTCAAGAACTTGGGCTCCTTCTCAAGCTCCTTGCCTGATCGCCT
ATCAATCTTCGTCACGAGCTCAGAAAACTTGACGGCAATGTGGGAGGTGT
GGCAGTCAAGCACTGGGGCATATCCATTTCCAATCTGGCCAGGGTGGTTC
ATGATGATGACCTGTGAGGTGAAGTTGGCAGCTTCCCTGGCTGGATCATC
CTTCGAGTTGGAAGCAACAAAACCACGCTTGAGATCCTTGACAGCAACGT
TCT
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