CF834966
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA14_ARATH (Auxin-responsive protein IAA14 OS=Arabidopsis thaliana GN=IAA14 PE=1 SV=2) HSP 1 Score: 199.519 bits (506), Expect = 1.666e-50 Identity = 100/158 (63.29%), Postives = 122/158 (77.22%), Query Frame = -2 Query: 294 AKAQVVGWPPIRSFRKNSLATTSKNNDEVDGKPGPGAL-FIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAMEKSKIRN 764 AKAQVVGWPP+R++RKN +A E G G + F+KVSMDGAPYLRKVDL+ YT+Y +LS AL KMFS FT+G G+ + ++ESK+ DLL+ SEYV +YEDKDGDWMLVGDVPW MF++SCKRL+IMKGS+AIGLAPRAMEK K R+ Sbjct: 73 AKAQVVGWPPVRNYRKNVMANQKSGEAEEAMSSGGGTVAFVKVSMDGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQGMI--DFMNESKVMDLLNSSEYVPSYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAIGLAPRAMEKFKNRS 228
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA5_ORYSJ (Auxin-responsive protein IAA5 OS=Oryza sativa subsp. japonica GN=IAA5 PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.842e-49 Identity = 93/155 (60.00%), Postives = 118/155 (76.13%), Query Frame = -2 Query: 306 AAKAQVVGWPPIRSFRKNSLATT-SKNNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAMEKS 767 AAKAQVVGWPP+R++RKN+LA + SK E G G L++KVSMDGAPYLRKVDL+ Y++Y +LS ALEKMFSCF GQ G ++ R+ L+ D L EYVLTYEDKD DWMLVGD+PW++F C++LKIM+GSDA G+APR++E+S Sbjct: 113 AAKAQVVGWPPVRNYRKNTLAASASKGKGEDKGTAEGGPLYVKVSMDGAPYLRKVDLKMYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDKDADWMLVGDLPWDLFTTICRKLKIMRGSDAAGIAPRSIEQS 267
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA5_ORYSI (Auxin-responsive protein IAA5 OS=Oryza sativa subsp. indica GN=IAA5 PE=2 SV=2) HSP 1 Score: 196.052 bits (497), Expect = 1.842e-49 Identity = 93/155 (60.00%), Postives = 118/155 (76.13%), Query Frame = -2 Query: 306 AAKAQVVGWPPIRSFRKNSLATT-SKNNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAMEKS 767 AAKAQVVGWPP+R++RKN+LA + SK E G G L++KVSMDGAPYLRKVDL+ Y++Y +LS ALEKMFSCF GQ G ++ R+ L+ D L EYVLTYEDKD DWMLVGD+PW++F C++LKIM+GSDA G+APR++E+S Sbjct: 114 AAKAQVVGWPPVRNYRKNTLAASASKGKGEDKGTAEGGPLYVKVSMDGAPYLRKVDLKMYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDKDADWMLVGDLPWDLFTTICRKLKIMRGSDAAGIAPRSIEQS 268
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA17_ARATH (Auxin-responsive protein IAA17 OS=Arabidopsis thaliana GN=IAA17 PE=1 SV=2) HSP 1 Score: 196.052 bits (497), Expect = 1.842e-49 Identity = 98/157 (62.42%), Postives = 121/157 (77.07%), Query Frame = -2 Query: 297 AKAQVVGWPPIRSFRKNSLATTSKNNDEVDGKPGP-GALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAMEKSKIR 764 AKAQVVGWPP+RS+RKN + + K++ GP A F+KVSMDGAPYLRK+DLR Y +Y ELS+AL MFS FT+G+ G E + ++E KL DL++ +YV +YEDKDGDWMLVGDVPW MF+D+CKRL++MKGSDAIGLAPRAMEK K R Sbjct: 79 AKAQVVGWPPVRSYRKNVMVSCQKSSG------GPEAAAFVKVSMDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTMGKHGGEEGM-IDFMNERKLMDLVNSWDYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKGSDAIGLAPRAMEKCKSR 228
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA7_ARATH (Auxin-responsive protein IAA7 OS=Arabidopsis thaliana GN=IAA7 PE=1 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 5.927e-48 Identity = 98/161 (60.87%), Postives = 120/161 (74.53%), Query Frame = -2 Query: 309 AKAQVVGWPPIRSFRKNSLAT--TSKNNDEVD-------GKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAMEK 764 AKAQVVGWPP+R++RKN + TS +E G GA +KVSMDGAPYLRKVDL+ Y +Y +LS AL KMFS FT+G G+ + ++ESKL +LL+ SEYV +YEDKDGDWMLVGDVPWEMF++SCKRL+IMKGS+A+GLAPRAMEK Sbjct: 79 AKAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNFGGGAAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMI--DFMNESKLMNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAVGLAPRAMEK 237
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA11_ORYSJ (Auxin-responsive protein IAA11 OS=Oryza sativa subsp. japonica GN=IAA11 PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.320e-47 Identity = 97/155 (62.58%), Postives = 115/155 (74.19%), Query Frame = -2 Query: 303 AAKAQVVGWPPIRSFRKNSLATTSKNNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAMEKSK 767 A KAQVVGWPP+RSFRKN LA K A +KVSMDGAPYLRK+D+ Y +Y ELS A + MF+ FTIG+CGSH+ ++ +KL+D L EYV TYEDKDGDWMLVGDVPWEMF++SCKRL+IMKGS+AIGLAPRA+EK K Sbjct: 96 APKAQVVGWPPVRSFRKNVLAEKCK-----------AAALVKVSMDGAPYLRKIDVAMYKSYPELSMAFQNMFTSFTIGKCGSHQ----QLKESNKLRDDL---EYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAVEKCK 232
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA13_ORYSJ (Auxin-responsive protein IAA13 OS=Oryza sativa subsp. japonica GN=IAA13 PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.114e-41 Identity = 92/167 (55.09%), Postives = 113/167 (67.66%), Query Frame = -2 Query: 303 AAKAQVVGWPPIRSFRKNSL---ATTSKNNDEVDGK---PGPGA------LFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAMEKSK 767 A KAQ VGWPP+RSFR+N + + SK +E D + P A F+KVSMDGAPYLRKVDL+ Y +Y +LS AL+KMF FT A G M + ++GS+ V TYEDKDGDWMLVGDVPW+MF++SCKRL+IMKGS+AIGLAPRA +K K Sbjct: 82 APKAQAVGWPPVRSFRRNIMTVQSVKSKKEEEADKQQQQPAANASGSNSSAFVKVSMDGAPYLRKVDLKMYNSYKDLSLALQKMFGTFT--------ATGNNM-------NEVNGSDAVTTYEDKDGDWMLVGDVPWQMFVESCKRLRIMKGSEAIGLAPRAKDKYK 233
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA13_ORYSI (Auxin-responsive protein IAA13 OS=Oryza sativa subsp. indica GN=IAA13 PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.114e-41 Identity = 92/167 (55.09%), Postives = 113/167 (67.66%), Query Frame = -2 Query: 303 AAKAQVVGWPPIRSFRKNSL---ATTSKNNDEVDGK---PGPGA------LFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAMEKSK 767 A KAQ VGWPP+RSFR+N + + SK +E D + P A F+KVSMDGAPYLRKVDL+ Y +Y +LS AL+KMF FT A G M + ++GS+ V TYEDKDGDWMLVGDVPW+MF++SCKRL+IMKGS+AIGLAPRA +K K Sbjct: 82 APKAQAVGWPPVRSFRRNIMTVQSVKSKKEEEADKQQQQPAANASGSNSSAFVKVSMDGAPYLRKVDLKMYNSYKDLSLALQKMFGTFT--------ATGNNM-------NEVNGSDAVTTYEDKDGDWMLVGDVPWQMFVESCKRLRIMKGSEAIGLAPRAKDKYK 233
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA15_ORYSJ (Auxin-responsive protein IAA15 OS=Oryza sativa subsp. japonica GN=IAA15 PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 4.257e-38 Identity = 80/149 (53.69%), Postives = 106/149 (71.14%), Query Frame = -2 Query: 318 KAQVVGWPPIRSFRKNSLATTSKNNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALE-KMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRA 761 KA+VVGWPP+R+FRKN+LA + + A F+KV++DGAPYLRKVDL Y Y +L +AL+ K FS FTI + G+ E KL D + G+EYV TYEDKDGDWMLVGDVPW+MF+++C+RL++MK S+A+ LAPR+ Sbjct: 79 KARVVGWPPVRAFRKNALAALAAASSSK-------AKFVKVAVDGAPYLRKVDLEAYRGYDQLLAALQDKFFSHFTIRKLGNEEM---------KLVDAVSGNEYVPTYEDKDGDWMLVGDVPWKMFVETCQRLRLMKSSEAVNLAPRS 211
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA1_ORYSJ (Auxin-responsive protein IAA1 OS=Oryza sativa subsp. japonica GN=IAA1 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 5.560e-38 Identity = 82/153 (53.59%), Postives = 105/153 (68.63%), Query Frame = -2 Query: 312 AAKAQVVGWPPIRSFRKNSLATTSKNNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALE-KMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAME 767 A KA+VVGWPP+RSFRKN+LA A F+KV++DGAPYLRKVDL Y+ Y +L AL+ K FS FTI + E KL D ++G+EYV TYEDKDGDWMLVGDVPW+MF+++C+RL++MK S+A+ LAPRA + Sbjct: 72 APKARVVGWPPVRSFRKNALA----------------AKFVKVAVDGAPYLRKVDLEAYSGYDQLLRALQDKFFSHFTIRKFAD---------DERKLVDAVNGTEYVPTYEDKDGDWMLVGDVPWKMFVETCQRLRLMKSSEAVNLAPRAAQ 199 The following BLAST results are available for this feature:
BLAST of CF834966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834966 ID=CF834966; Name=CF834966; organism=Citrus sinensis; type=EST; length=768bpback to top |