CF834966

Overview
NameCF834966
Unique NameCF834966
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length768
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA6_PEA (Auxin-induced protein IAA6 OS=Pisum sativum GN=IAA6 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.326e-31
Identity = 77/143 (53.85%), Postives = 91/143 (63.64%), Query Frame = -2
Query:  333 KAQVVGWPPIRSFRKNSLATTSKNNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIG 761
            K QVVGWPP+ S+RK ++   SK             +++KVSMDGAPYLRK+DL  +  Y EL+ ALEK+F C     CG  EA          LKD     E+V  YEDKDGDWMLVGDVPWEMFI+SCKRL+IMK SDA G
Sbjct:   53 KNQVVGWPPVCSYRKKNMNEGSK-------------MYMKVSMDGAPYLRKIDLCLHKGYLELALALEKLFDC-----CGIEEA----------LKDA-ENCEHVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSDAKG 166          
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA10_ORYSJ (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica GN=IAA10 PE=2 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 8.598e-31
Identity = 78/163 (47.85%), Postives = 96/163 (58.90%), Query Frame = -2
Query:  321 VVGWPPIRSFRKNSLATTSKNN------------------DEVDG-KPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPR 752
            VVGWPPIR FR NSL   +K N                  D+ +G K G  A ++KV+MDG    RKVDL  + +Y  L+ ALE MF+  +IG C SH     ++L  S        +EY LTYED+DGDWMLVGDVPWEMF+ S KRL+IM+ SDA GL  R
Sbjct:  112 VVGWPPIRQFRMNSLFNQAKENTSETDTKKTATNESDVQKDKEEGEKKGRVAGWVKVNMDGEVIGRKVDLNAHRSYKTLALALELMFTKPSIGLCASHNTNSLKLLDNS--------AEYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSDANGLGQR 266          
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA10_ORYSI (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica GN=IAA10 PE=2 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 8.598e-31
Identity = 78/163 (47.85%), Postives = 96/163 (58.90%), Query Frame = -2
Query:  321 VVGWPPIRSFRKNSLATTSKNN------------------DEVDG-KPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPR 752
            VVGWPPIR FR NSL   +K N                  D+ +G K G  A ++KV+MDG    RKVDL  + +Y  L+ ALE MF+  +IG C SH     ++L  S        +EY LTYED+DGDWMLVGDVPWEMF+ S KRL+IM+ SDA GL  R
Sbjct:  112 VVGWPPIRQFRMNSLFNQAKENTSETDTKKTATNESDVQKDKEEGEKKGRVAGWVKVNMDGEVIGRKVDLNAHRSYKTLALALELMFTKPSIGLCASHNTNSLKLLDNS--------AEYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSDANGLGQR 266          
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA24_ORYSJ (Auxin-responsive protein IAA24 OS=Oryza sativa subsp. japonica GN=IAA24 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.467e-30
Identity = 73/151 (48.34%), Postives = 93/151 (61.59%), Query Frame = -2
Query:  339 AKAQVVGWPPIRSFRKNSL-------ATTSKNNDEVDGKPGPGA-LFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFS-CFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDA 764
            AKAQVVGWPP+R++R+N+        A T K  DE   +   G  L++KVSMDGAPYLRKVDL+    Y EL  AL+ +F+ CF+                 +   D     ++ + YEDKDGD MLVGDVPWEMFI SCK+L+IMKGS+A
Sbjct:   85 AKAQVVGWPPVRAYRRNTFHQAAAAAAATKKGGDEKQKQQQQGGGLYVKVSMDGAPYLRKVDLKMCKGYRELREALDLLFTKCFS-----------------ATASDGCSDGQFAIAYEDKDGDLMLVGDVPWEMFISSCKKLRIMKGSEA 218          
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: AUX22_SOYBN (Auxin-induced protein AUX22 OS=Glycine max GN=AUX22 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.467e-30
Identity = 75/158 (47.47%), Postives = 97/158 (61.39%), Query Frame = -2
Query:  294 KAQVVGWPPIRSFRKNSLATTSKNNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDA--IGLAPRAMEKSKIRN 761
            K+QVVGWPP+ S+RK +    S N        G   +++KVSMDGAP+LRK+DL  +  Y +L+ AL+K+F C+              M+   K  D    SE+V  YEDKDGDWMLVGDVPWEMF++SCKRL+IMK SDA   GL P+   K  I +
Sbjct:   62 KSQVVGWPPVCSYRKKN----SMNE-------GASKMYVKVSMDGAPFLRKIDLGLHKGYSDLALALDKLFGCYG-------------MVEALKNAD---NSEHVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKKSDAKGFGLQPKGSLKGFIES 192          
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA12_ORYSJ (Auxin-responsive protein IAA12 OS=Oryza sativa subsp. japonica GN=IAA12 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.502e-30
Identity = 82/177 (46.33%), Postives = 103/177 (58.19%), Query Frame = -2
Query:  312 AKAQVVGWPPIRSFRKN------SLATTSK-------NNDEVDGK---PGP---------GALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGL-APRAME 764
            AKAQVVGWPP+RS+RK+      + A+ SK       N DE   K   P P         G   +KVSMDGAPYLRK+DLR Y  Y EL  ALE MF CF+    G++                   SE+ +TY+DKDGD MLVGDVP++MF  +CK+L+IMK S+A GL +PR M+
Sbjct:   67 AKAQVVGWPPVRSYRKSCFQQQSAAASKSKAAVSSCNNKDEPITKNAAPAPAASSAAAANGGSLVKVSMDGAPYLRKIDLRMYKGYRELREALEAMFVCFSGAADGANP------------------SEFAITYQDKDGDLMLVGDVPFDMFTSTCKKLRIMKRSEATGLGSPRQMK 225          
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: AX22A_PHAAU (Auxin-induced protein 22A OS=Phaseolus aureus GN=AUX22A PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.502e-30
Identity = 78/159 (49.06%), Postives = 101/159 (63.52%), Query Frame = -2
Query:  294 KAQVVGWPPIRSFRK-NSLATTSKNNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDA--IGLAPRAMEKSKIRN 761
            K QVVGWPP+ S+RK NS+   SK             +++KVSMDGAP+LRK+DL  +  Y +L+ ALEK+F C+     G  EA          LK++ +G E+V  YEDKDGDWMLVGDVPWEMF++SCKRL+IMK +DA   GL P+   K  I +
Sbjct:   62 KNQVVGWPPVCSYRKKNSVNEASK-------------MYVKVSMDGAPFLRKMDLGMHKGYSDLAFALEKLFGCY-----GMVEA----------LKNVENG-EHVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRADAKGFGLQPKGSLKGFIES 191          
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA14_ORYSJ (Auxin-responsive protein IAA14 OS=Oryza sativa subsp. japonica GN=IAA14 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.573e-30
Identity = 70/154 (45.45%), Postives = 91/154 (59.09%), Query Frame = -2
Query:  339 AAKAQVVGWPPIRSFRKNSLATTS---------KNNDEVDG--KPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDA 767
            A+K QVVGWPP+ S+R+++  ++S         K   E D   K   G L++KVSMDGAPYLRKVDLR Y  Y EL  AL+ +F CF+     S                    + + + YEDKDGD ML GDVPW+MFI SCK+L+IM+GS+A
Sbjct:   60 ASKVQVVGWPPVGSYRRSTFQSSSSSTAAAAKGKGGGETDQGRKNKGGGLYVKVSMDGAPYLRKVDLRMYGGYRELRDALDALFGCFSADASAS-------------------AAHFAVAYEDKDGDLMLAGDVPWDMFISSCKKLRIMRGSEA 194          
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: AX22C_PHAAU (Auxin-induced protein 22C OS=Phaseolus aureus GN=AUX22C PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.242e-29
Identity = 74/156 (47.44%), Postives = 92/156 (58.97%), Query Frame = -2
Query:  300 KAQVVGWPPIRSFRKNSLATTSKNNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIG--LAPRAMEKSKI 761
            K QVVGWPP+ S+RK +     K             L++KVSMDGAP+LRK+DL  +  Y +L+ AL+K F C+ I +                LKD    +E+V  YEDKDGDWMLVGDVPWEMF +SCKRL+IMK SDA G  L P+   K  I
Sbjct:   57 KNQVVGWPPVCSYRKKNTVNEPK-------------LYVKVSMDGAPFLRKIDLAMHKGYSDLAFALDKFFGCYGICEA---------------LKDA-ENAEHVPIYEDKDGDWMLVGDVPWEMFRESCKRLRIMKRSDAKGFDLQPKGSLKGFI 183          
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA19_ARATH (Auxin-responsive protein IAA19 OS=Arabidopsis thaliana GN=IAA19 PE=1 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 2.118e-29
Identity = 75/155 (48.39%), Postives = 94/155 (60.65%), Query Frame = -2
Query:  309 AAKAQVVGWPPIRSFRKNSLATTSKNNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDA--IGLAPRAMEK 767
            AAK+QVVGWPP+ S+RK       KN+ +       G  ++KVSMDG PYLRK+DL +   Y +L+ AL+K+F    IG                 LKD     EYV  YEDKDGDWML GDVPW MF++SCKRL+IMK SDA   GL PR +++
Sbjct:   66 AAKSQVVGWPPVCSYRK-------KNSCKEASTTKVGLGYVKVSMDGVPYLRKMDLGSSQGYDDLAFALDKLFGFRGIGVA---------------LKDG-DNCEYVTIYEDKDGDWMLAGDVPWGMFLESCKRLRIMKRSDATGFGLQPRGVDE 197          
The following BLAST results are available for this feature:
BLAST of CF834966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
IAA6_PEA1.326e-3153.85Auxin-induced protein IAA6 OS=Pisum sativum GN=IAA... [more]
IAA10_ORYSJ8.598e-3147.85Auxin-responsive protein IAA10 OS=Oryza sativa sub... [more]
IAA10_ORYSI8.598e-3147.85Auxin-responsive protein IAA10 OS=Oryza sativa sub... [more]
IAA24_ORYSJ1.467e-3048.34Auxin-responsive protein IAA24 OS=Oryza sativa sub... [more]
AUX22_SOYBN1.467e-3047.47Auxin-induced protein AUX22 OS=Glycine max GN=AUX2... [more]
IAA12_ORYSJ2.502e-3046.33Auxin-responsive protein IAA12 OS=Oryza sativa sub... [more]
AX22A_PHAAU2.502e-3049.06Auxin-induced protein 22A OS=Phaseolus aureus GN=A... [more]
IAA14_ORYSJ5.573e-3045.45Auxin-responsive protein IAA14 OS=Oryza sativa sub... [more]
AX22C_PHAAU1.242e-2947.44Auxin-induced protein 22C OS=Phaseolus aureus GN=A... [more]
IAA19_ARATH2.118e-2948.39Auxin-responsive protein IAA19 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06H05_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834966 ID=CF834966; Name=CF834966; organism=Citrus sinensis; type=EST; length=768bp
TTTTTTTTAACCTTTTAAGATCCCTGTCACTATATAGATATATAACTCCA
CCAATCCTAATTTTCTTAGTATCTTAACATGGTTTTACAACAATCATATC
ATAAACATAGACTTCTTCCAAACTTAAAAAAGTAACACAAACCTCATGTA
AACAAACAGGATACACAACTAAACCACAAACTTGCATCTTGCCCATGCCA
TCCTGTCCTTTTTAACTTTTCATCAACCCAGTCTCCTCCTACCCATGAAA
GGCATGAACTAGAAGGCACCCCATCCCAGCCAGGCATTCACTAGTTCCTG
ATCTTGGATTTTTCCATTGCCCTGGGAGCTAAGCCAATGGCATCAGAACC
TTTCATGATCTTTAATCGCTTGCATGAATCAATAAACATCTCCCACGGCA
CATCCCCAACGAGCATCCAGTCACCATCCTTGTCCTCATATGTAAGCACA
TATTCTGATCCATGCAAAAGATCCTTCAACTTGCTCTCACTCAGCATTTC
CCTCCCTGGTGCTTCATGTGATCCACATTGACCAATTGTAAAGCAACTGA
ACATCTTCTCCAGAGCAGAAGATAGTTCCCCATAATTGGTGTATGTTCTC
AAATCTACCTTCCTCAAATAAGGAGCACCGTCCATGCTAACCTTAATAAA
AAGAGCACCAGGACCTGGTTTTCCATCTACTTCATCATTGTTCTTTGAAG
TGGTTGCCAATGAATTCTTCCTAAATGATCTTATTGGAGGCCAACCCACG
ACCTGTGCCTTGGCAGCA
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