CF834966
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA12_ARATH (Auxin-responsive protein IAA12 OS=Arabidopsis thaliana GN=IAA12 PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.897e-28 Identity = 81/178 (45.51%), Postives = 99/178 (55.62%), Query Frame = -2 Query: 294 AQVVGWPPIRSFRKNSLATTSK----------------NNDE---VDGKPGP---GALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAME-KSKIRN 758 +QVVGWPPI R NSL NDE V K P G F+KV+MDG RKVD+R +++Y L+ LE+MF T C RE + +L D S++VLTYEDK+GDWMLVGDVPW MFI+S KRL+IM S+A GLAPR E K + RN Sbjct: 68 SQVVGWPPIGLHRMNSLVNNQAMKAARAEEGDGEKKVVKNDELKDVSMKVNPKVQGLGFVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTC-------REKVKPLRLLD--GSSDFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRIMGTSEASGLAPRRQEQKDRQRN 236
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA6_ARATH (Auxin-responsive protein IAA6 OS=Arabidopsis thaliana GN=IAA6 PE=1 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 1.518e-27 Identity = 66/143 (46.15%), Postives = 86/143 (60.14%), Query Frame = -2 Query: 333 KAQVVGWPPIRSFRKNSLATTSKNNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIG 761 K+Q VGWPP+ S+R+ KNN+E G ++KVSMDG PY+RK+DL + +Y L + LE +F C IG + E K EY++ YEDKD DWMLVGDVPW+MF +SCKRL+I+K SDA G Sbjct: 68 KSQAVGWPPVCSYRRK------KNNEEASKAIG----YVKVSMDGVPYMRKIDLGSSNSYINLVTVLENLFGCLGIG-----------VAKEGKK------CEYIIIYEDKDRDWMLVGDVPWQMFKESCKRLRIVKRSDATG 183
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA13_ARATH (Auxin-responsive protein IAA13 OS=Arabidopsis thaliana GN=IAA13 PE=2 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.589e-27 Identity = 82/180 (45.56%), Postives = 101/180 (56.11%), Query Frame = -2 Query: 303 AKAQVVGWPPIRSFRKNSL----ATTSKNNDE------------------VDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMF---SCFTIGQCGSHEAPGREMLSESKLKDLLHGS-EYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAMEKSK 764 + +QVVGWPPI S R NSL AT S +E V+GK G FIKV+MDG RKVDL +++Y L+ LE MF + T+G P R LL GS E+VLTYEDK+GDWMLVGDVPW MFI+S KRL++MK S+A GLA R E ++ Sbjct: 73 SSSQVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDEPKDVTKKVNGKVQVG--FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLR----------LLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQEPNE 240
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA11_ARATH (Auxin-responsive protein IAA11 OS=Arabidopsis thaliana GN=IAA11 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.767e-27 Identity = 73/163 (44.79%), Postives = 94/163 (57.67%), Query Frame = -2 Query: 327 AAKAQVVGWPPIRSFRKNSLATTSK---------------NNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSE-YVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLA 767 A QVVGWPPIR++R NS+ +K N + D ++F+KV+MDG P RK+DL + Y LS+ LE+MF +G + E G E+ +K L GS VLTYEDK+GDWMLVGDVPW MFI S +RL+IMK S+A G A Sbjct: 84 ATSGQVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRSDSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGS-RTLETDGH---METPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEATGKA 242
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA5_ARATH (Auxin-responsive protein IAA5 OS=Arabidopsis thaliana GN=IAA5 PE=2 SV=3) HSP 1 Score: 120.553 bits (301), Expect = 9.837e-27 Identity = 67/142 (47.18%), Postives = 83/142 (58.45%), Query Frame = -2 Query: 345 AAKAQVVGWPPIRSFR-KNSLATTSKNNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGS 767 A K+QVVGWPP+ S+R KNSL T + ++KVS+DGA +LRK+DL Y Y +L+SAL+ +F C+ D L SE V YEDKDGDWML GDVPWEMF+ SCKRL+IMK S Sbjct: 49 AKKSQVVGWPPVCSYRRKNSLERTKSS-------------YVKVSVDGAAFLRKIDLEMYKCYQDLASALQILFGCYI------------------NFDDTLKESECVPIYEDKDGDWMLAGDVPWEMFLGSCKRLRIMKRS 159
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA2_ORYSJ (Auxin-responsive protein IAA2 OS=Oryza sativa subsp. japonica GN=IAA2 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.285e-26 Identity = 62/157 (39.49%), Postives = 90/157 (57.32%), Query Frame = -2 Query: 342 AAKAQVVGWPPIRSFRKNSLATTSKNNDEVDGKPGPG---------------ALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSD 767 AA A VVGWPP+RSFR+N +++S ++ + P +F+K++MDG P RKVDL Y Y +LS+A++K+F G + A + +++ G EY L YED +GD MLVGDVPW+MFI + KRL+++K SD Sbjct: 66 AAAAPVVGWPPVRSFRRNLASSSSSSSKQAPPPPSSSPQNGDKASKDGGAEKGMFVKINMDGVPIGRKVDLAAYGGYAQLSAAVDKLFR----GLLAAQSAAADGEADAAAAGEMVGGGEYTLVYEDDEGDRMLVGDVPWQMFIATAKRLRVLKSSD 218
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA16_ORYSJ (Auxin-responsive protein IAA16 OS=Oryza sativa subsp. japonica GN=IAA16 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.423e-25 Identity = 67/169 (39.64%), Postives = 95/169 (56.21%), Query Frame = -2 Query: 303 AQVVGWPPIRSFRKNSLATTSKNNDEVDGKP-------GPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCF-------TIGQCGSHEAPGREMLSESK-LKDLLHGS--EYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAMEKSK 758 A VVGWPP+RSFR+N +++S + G+ G A F+KV+MDG P RKVDL + YGELS+A++++F T+ + A G E + + LL G EY L YED +GD MLVGDVPW MFI + +RL++++ SD RA + + Sbjct: 56 APVVGWPPVRSFRRNLASSSSSSKPPRGGRDAAAAATGGKVARFVKVNMDGVPIGRKVDLAAHGGYGELSAAVDRLFRGLLAAQRDPTMATAAAAAAAGESCTGEEEAIAGLLDGGSGEYTLVYEDDEGDQMLVGDVPWNMFIAAARRLRVLRSSDLNASTIRAGSRKR 224
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA18_ORYSJ (Auxin-responsive protein IAA18 OS=Oryza sativa subsp. japonica GN=IAA18 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.398e-25 Identity = 70/158 (44.30%), Postives = 93/158 (58.86%), Query Frame = -2 Query: 324 VVGWPPIRSFRKNSLATTS------KNNDEVDGKPGPGAL---FIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKL-KDLLHGSE-YVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGS----DAIGLAP 752 VVGWPPIRSFR+N +S + NDE D K P +K++MDG P RKVDL+ Y +Y +LSSA+E++F F Q A E +E K+ LL G+ Y L YED DGD ML GD+PW++F+ + KRL++M+ S D IG P Sbjct: 168 VVGWPPIRSFRRNLTNGSSFKQSPERQNDEADDKAKPICKKRPLVKINMDGIPIGRKVDLQIYDSYQKLSSAVEELFRGFLEAQKDLSCAESGEQGAEDKIFSGLLDGTGVYTLVYEDNDGDRMLAGDIPWKVFVSTVKRLRVMRRSELPHDMIGADP 325
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA26_ARATH (Auxin-responsive protein IAA26 OS=Arabidopsis thaliana GN=IAA26 PE=2 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 7.050e-25 Identity = 65/157 (41.40%), Postives = 88/157 (56.05%), Query Frame = -2 Query: 342 AKAQVVGWPPIRSFRKNSLATTSKN-----------NDEVDGKPG----PGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGS-EYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSD 764 A VVGWPP+RSFRKN +T+S N DG+ +F+K++MDG P RKVDL Y +Y +LS ++K+F Q + G E + LL G E+ LTYED +GD MLVGDVPW+MF+ S KRL+++K S+ Sbjct: 100 APGPVVGWPPVRSFRKNLASTSSSKLGNESSHGGQINKSDDGEKQVETKKEGMFVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRDISDGQGEE----KPIIGLLDGKGEFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSE 252
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA15_ARATH (Auxin-responsive protein IAA15 OS=Arabidopsis thaliana GN=IAA15 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.571e-24 Identity = 62/142 (43.66%), Postives = 85/142 (59.86%), Query Frame = -2 Query: 330 QVVGWPPIRSFRKNSLATTSKNNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGL 755 Q+VGWPP+ + RK T + ++KV++DGA YLRKVDL Y YG+L +ALE MF + +++ ++ +L E+V TYEDKDGD MLVGDVPW MF++SCKR+++MK DAIGL Sbjct: 70 QLVGWPPVATARK----TVRRK-------------YVKVALDGAAYLRKVDLGMYDCYGQLFTALENMF---------------QGIITICRVTELERKGEFVATYEDKDGDLMLVGDVPWMMFVESCKRMRLMKTGDAIGL 179 The following BLAST results are available for this feature:
BLAST of CF834966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834966 ID=CF834966; Name=CF834966; organism=Citrus sinensis; type=EST; length=768bpback to top |