CF834966
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA7_ORYSJ (Auxin-responsive protein IAA7 OS=Oryza sativa subsp. japonica GN=IAA7 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.570e-24 Identity = 66/146 (45.21%), Postives = 92/146 (63.01%), Query Frame = -2 Query: 342 VVGWPPIRSFRKNSLATTSKNNDEV-DGKPGPGAL------FIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSES-KLKDLLHGS-EYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSD 752 VVGWPP+R+FR+N LAT+SK + E+ +GK A FIK++MDG P RK+DL + +Y +LS A++K+F Q A ++ E + LL G+ EY L YED +GD +LVGDVPW MF+ S KRL+++K SD Sbjct: 139 VVGWPPVRTFRRN-LATSSKASLELQNGKKAAKAEEIKRAPFIKINMDGVPIGRKIDLNAFDSYEKLSLAVDKLFRGLLAAQRDPLTAGAKDCQQEDVAISGLLDGTGEYTLVYEDYEGDKVLVGDVPWGMFVSSVKRLRVLKTSD 283
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA26_ORYSJ (Auxin-responsive protein IAA26 OS=Oryza sativa subsp. japonica GN=IAA26 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.795e-24 Identity = 60/126 (47.62%), Postives = 73/126 (57.94%), Query Frame = -2 Query: 318 DGKPGPG------ALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRA 677 +G P P A F+KVSMDG PYLRKVD+ Y +Y EL AL MF C TIG L D E+ + YED DGDWMLVGDVPWEMF+ SCKR+++M+ +A GL+ A Sbjct: 32 NGHPPPSSSMIQAAYFVKVSMDGTPYLRKVDVAAYGDYLELVEALNDMFYCSTIG-----------------LMDGYGEWEHAVVYEDGDGDWMLVGDVPWEMFVSSCKRMRVMRACEARGLSSNA 140
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA6_ORYSJ (Auxin-responsive protein IAA6 OS=Oryza sativa subsp. japonica GN=IAA6 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.018e-23 Identity = 63/152 (41.45%), Postives = 91/152 (59.87%), Query Frame = -2 Query: 342 AKAQVVGWPPIRSFRKNSLATTSKN------NDEVDGKPGPGAL---FIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKL-KDLLHGS-EYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSD 764 A A VVGWPPIRSFR+N +++S ND + K +K++MDG P RK+DL Y +Y LSSA++++F F Q A + ++ K+ LL GS EY L YED +GD MLVGDVPW++F+ + KRL++++ S+ Sbjct: 172 AAAPVVGWPPIRSFRRNLASSSSSKHSPEPQNDNANAKVTLTCKKNPLVKINMDGIPIGRKIDLAAYNSYDGLSSAVKQLFHGFLQAQKDQTNAQIAQQGADDKIFYQLLDGSGEYTLVYEDSEGDRMLVGDVPWKVFVSTAKRLRVLRSSE 323
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA10_ARATH (Auxin-responsive protein IAA10 OS=Arabidopsis thaliana GN=IAA10 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.470e-22 Identity = 65/172 (37.79%), Postives = 88/172 (51.16%), Query Frame = -2 Query: 330 AAKAQVVGWPPIRSFRKNSLAT-------------------------TSKNNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGS-EYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGL 767 A + VGWPP+R++R NSL +KN+D K ++ +KV+MDG RKVDL +Y L L+ MF S+ G + + E+ LL GS EY++TY+DKDGDWMLVGDVPW+MF+ S RL+IMK S G+ Sbjct: 89 ATRQVAVGWPPLRTYRINSLVNQAKSLATEGGLSSGIQKETTKSVVVAAKNDDACFIKSSRTSMLVKVTMDGVIIGRKVDLNALDSYAALEKTLDLMFFQIPSPVTRSN-TQGYKTIKETCTSKLLDGSSEYIITYQDKDGDWMLVGDVPWQMFLGSVTRLRIMKTSIGAGV 259
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA18_ARATH (Auxin-responsive protein IAA18 OS=Arabidopsis thaliana GN=IAA18 PE=2 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 4.277e-22 Identity = 63/162 (38.89%), Postives = 88/162 (54.32%), Query Frame = -2 Query: 342 AKAQVVGWPPIRSFRKNSLATTSKN--------------NDEVDGKPGP------GALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGS-EYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSD 764 A VVGWPP+RSFRKN + +S N + D G +F+K++M G P RKVDL + +Y +LS ++K+F Q + P + E + LL G+ EY LTYED +GD MLVGDVPW+MF+ S KRL+++K S+ Sbjct: 93 APGPVVGWPPVRSFRKNLASGSSSKLGNDSTTSNGVTLKNQKCDAAAKTTEPKRQGGMFVKINMYGVPIGRKVDLSAHNSYEQLSFTVDKLFRGLLAAQ---RDFPS-SIEDEKPITGLLDGNGEYTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKTSE 250
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA28_ARATH (Auxin-responsive protein IAA28 OS=Arabidopsis thaliana GN=IAA28 PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.772e-21 Identity = 59/148 (39.86%), Postives = 85/148 (57.43%), Query Frame = -2 Query: 321 AQVVGWPPIRSFRKNSLATTSKNNDEVDGKPGPGA--LFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPR 758 A VVGWPP+RS R+N T++ +E+ K L++K++M+G P RKV+L Y NY +LS A++++FS + DL +Y L YED +GD +LVGDVPWEMF+ + KRL ++K S A L+PR Sbjct: 47 APVVGWPPVRSSRRN---LTAQLKEEMKKKESDEEKELYVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFS-------------------KKDSWDL--NRQYTLVYEDTEGDKVLVGDVPWEMFVSTVKRLHVLKTSHAFSLSPR 170
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA25_ORYSJ (Auxin-responsive protein IAA25 OS=Oryza sativa subsp. japonica GN=IAA25 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.376e-20 Identity = 60/155 (38.71%), Postives = 85/155 (54.84%), Query Frame = -2 Query: 357 AAKAQVVGWPPIRSFRKNSLATTSKNNDEVDGK------PGPGA------------LFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKI 767 A+ AQ+VGWPP+R+FRKN + D++ K G G+ +F+KV+++G RK+DL+ + +Y LS AL+ MF F + + ++M SK + YVL YED +GD MLVGDVPWE+FI S KRL I Sbjct: 88 ASSAQLVGWPPVRAFRKNLSTPKPADADDLMNKVKLCSDEGHGSRCAAQERRSSSTMFVKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQQMEEGSKKR-------YVLVYEDNEGDRMLVGDVPWELFIASVKRLYI 235
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA22_ORYSJ (Auxin-responsive protein IAA22 OS=Oryza sativa subsp. japonica GN=IAA22 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.143e-17 Identity = 51/144 (35.42%), Postives = 74/144 (51.39%), Query Frame = -2 Query: 390 AAKAQVVGWPPIRSFRKNSLATTSKNNDEVDGKPGP------------------GALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWE 767 A+ AQ+VGWPP+R+FRKN + D++ K P +F+KV+++G RK+DL+ + +Y LS AL+ MF F + + + M SK + YVL YED +GD MLVGDVPW+ Sbjct: 36 ASSAQLVGWPPVRTFRKNLSTPKPADADDLMNKMKPCSDEGHGSRDAAQERRPSSTMFVKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQRMEEGSKKR-------YVLVYEDNEGDRMLVGDVPWD 172
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA9_ORYSJ (Auxin-responsive protein IAA9 OS=Oryza sativa subsp. japonica GN=IAA9 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.205e-16 Identity = 54/138 (39.13%), Postives = 71/138 (51.45%), Query Frame = -2 Query: 354 KAQVVGWPPIRSFRKNSLATTSKNNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEY--VLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIM 761 K VVGWPP+ S R+ GA ++KV +G RKVDL +++Y EL++ L +MF P + E K+ + HG V+TYED DGDWMLVGDVPW+ F S KRLKI+ Sbjct: 73 KKTVVGWPPVSSARRAC----------------GGANYVKVKKEGDAIGRKVDLALHSSYDELAATLARMF-------------PTNDHQGEKKMANDDHGDAAGPVVTYEDGDGDWMLVGDVPWDDFARSVKRLKIL 181
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA31_ARATH (Auxin-responsive protein IAA31 OS=Arabidopsis thaliana GN=IAA31 PE=2 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.205e-16 Identity = 49/133 (36.84%), Postives = 72/133 (54.14%), Query Frame = -2 Query: 351 WPPIRSFRKNSLATTS--KNNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMK 743 WPPI+S +++L + D+ +LF+KV M+G P RK+DL ++ Y L L MF I CG+ + +VLTYEDKDGDWM+VGD+PW+MF+++ +RLKI + Sbjct: 48 WPPIKSRLRDTLKGRRLLRRGDDT-------SLFVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSII--CGNRDR-----------------KHHVLTYEDKDGDWMMVGDIPWDMFLETVRRLKITR 154 The following BLAST results are available for this feature:
BLAST of CF834966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834966 ID=CF834966; Name=CF834966; organism=Citrus sinensis; type=EST; length=768bpback to top |