CF834977

Overview
NameCF834977
Unique NameCF834977
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6745 contig Csv1_Contig6745:1716..2417. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834977 vs. ExPASy Swiss-Prot
Match: ALDOB_PONAB (Fructose-bisphosphate aldolase B OS=Pongo abelii GN=ALDOB PE=2 SV=3)

HSP 1 Score: 135.961 bits (341), Expect = 1.950e-31
Identity = 73/139 (52.52%), Postives = 85/139 (61.15%), Query Frame = -1
Query:  291 GTLWKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 704
            GTL KPNMVT G    K  TP+ +A  TV AL RT+PAAVP + FLSGG SEE+AT NLNA+N     KPW LSFS+GRALQ S L AW GK  N +  Q AF+ R  AN +A  G Y      G  + +SL    Y Y
Sbjct:  226 GTLLKPNMVTAGHACTKKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAANKEATQEAFMKRAVANHQAAKGQYVHTGSSGAASTQSLFTACYTY 364          
BLAST of CF834977 vs. ExPASy Swiss-Prot
Match: ALF2_LAMJA (Fructose-bisphosphate aldolase, non-muscle type OS=Lampetra japonica PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.547e-31
Identity = 70/139 (50.36%), Postives = 92/139 (66.19%), Query Frame = -1
Query:  291 GTLWKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 704
            G+L KPNMVT G  +  + +P  +A  TV AL+RT+P+AVP + FLSGGQSEE+A+ NLNA+NQL  ++PW+LSFS+GRALQ S LKAWAG   N+  A+  F  R   N  A  G Y      G  A+ESL + ++ Y
Sbjct:  226 GSLLKPNMVTAGQASKIRCSPQEVAMATVTALRRTVPSAVPGITFLSGGQSEEDASLNLNAINQLPLERPWALSFSYGRALQASVLKAWAGAPANIPAAKKEFEKRAAINGLAAQGKYVPAGSSGSAASESLFIANHNY 364          
BLAST of CF834977 vs. ExPASy Swiss-Prot
Match: ALF_SCHMA (Fructose-bisphosphate aldolase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.673e-31
Identity = 75/141 (53.19%), Postives = 93/141 (65.96%), Query Frame = -1
Query:  291 GTLWKPNMVTPGSEAPKV-TPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGD--AQLGEGAAESLHVKDYKY 704
            GTL KPNMVT G    K  TP   A  TVRALQRT+P AVP + FLSGGQSE +AT+NLN +N++   KPW+L+FSFGRALQ S L  W GK+ENV  AQ   L   KAN  A +G ++G+    LG+   +SL V ++ Y
Sbjct:  226 GTLLKPNMVTAGQACKKAYTPQENALATVRALQRTVPPAVPGITFLSGGQSELDATKNLNEINKIPGPKPWALTFSFGRALQASVLATWKGKKENVHAAQEELLKLAKANGAAAVGKFEGNMGTTLGD---KSLFVANHAY 363          
BLAST of CF834977 vs. ExPASy Swiss-Prot
Match: ALFC2_PEA (Fructose-bisphosphate aldolase 2, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 1.651e-30
Identity = 70/126 (55.56%), Postives = 87/126 (69.05%), Query Frame = -1
Query:  330 GTLWKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGE 704
            G L KP+MVTPG+E+  K +P  +AE+T+  L R +P AVP ++FLSGGQSE EAT NLNAMN  K+  PW +SFS+ RALQ + LK W G  ENV+ AQ A L R K+NS A LG Y GD +  E
Sbjct:  215 GILLKPSMVTPGAESKDKASPTKVAEYTLNLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMN--KSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYIGDGESEE 338          
BLAST of CF834977 vs. ExPASy Swiss-Prot
Match: ALDOB_RAT (Fructose-bisphosphate aldolase B OS=Rattus norvegicus GN=Aldob PE=1 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 1.651e-30
Identity = 70/139 (50.36%), Postives = 86/139 (61.87%), Query Frame = -1
Query:  291 GTLWKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 704
            GTL KPNM+T G    K  TP+ +A  TV AL RT+PAAVP++ FLSGG SEE+AT NLNA+ +    +PW LSFS+GRALQ S L AW GK  N +  Q AF+ R  AN +A  G Y      G  + +SL    Y Y
Sbjct:  226 GTLLKPNMLTAGHACTKKYTPEQVAMATVTALHRTVPAAVPSICFLSGGMSEEDATLNLNAIYRCPLPRPWKLSFSYGRALQASALAAWGGKAANKKATQEAFMKRAVANCQAAQGQYVHTGSSGAASTQSLFTASYTY 364          
BLAST of CF834977 vs. ExPASy Swiss-Prot
Match: ALF2_PLABA (Fructose-bisphosphate aldolase 2 OS=Plasmodium berghei (strain Anka) GN=ALDO2 PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.070e-29
Identity = 75/139 (53.96%), Postives = 91/139 (65.47%), Query Frame = -1
Query:  291 GTLWKPNMVTPGSEAPKVTP-DVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 704
            G   KPNMVT G +  + T  D I   TVR L+RT+P A+P V FLSGGQSEE+A+ NLN++N L    PW+L+FS+GRALQ S L  W GK+ENV KA+   L R +ANS AT G YKG A  G  A  SL+ K Y Y
Sbjct:  222 GASLKPNMVTAGYDCTEKTKTDDIGFFTVRTLRRTVPPALPGVAFLSGGQSEEDASINLNSINVLGPH-PWALTFSYGRALQASVLNTWQGKKENVAKARRVLLQRAEANSLATYGKYKGGAG-GSTAGASLYEKKYVY 358          
BLAST of CF834977 vs. ExPASy Swiss-Prot
Match: ALDOC_CARAU (Fructose-bisphosphate aldolase C OS=Carassius auratus GN=aldoc PE=2 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 3.113e-29
Identity = 73/139 (52.52%), Postives = 88/139 (63.31%), Query Frame = -1
Query:  291 GTLWKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 704
            GTL KPNMVT G   P K +   IA  TV AL+RT+P AV  V FLSGGQSEEEA+ NLNA+N     KPW+L+FS+GRALQ S L AW G +EN + A   FL R +AN  A  G Y      G  A +SL+V ++ Y
Sbjct:  226 GTLLKPNMVTAGHSCPTKFSNQEIAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINNCPLTKPWALTFSYGRALQASALSAWRGVKENEKAATEEFLKRAEANGLAAQGKYVSSGMDG-SAGQSLYVANHAY 363          
BLAST of CF834977 vs. ExPASy Swiss-Prot
Match: ALDCB_DANRE (Fructose-bisphosphate aldolase C-B OS=Danio rerio GN=aldocb PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.545e-28
Identity = 70/139 (50.36%), Postives = 87/139 (62.59%), Query Frame = -1
Query:  291 GTLWKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 704
            GTL KPNMVT G   P K + + IA  TV AL+RT+P AV  V FLSGGQSEEEA+ NLN++N     KPW L+FS+GRALQ S L AW G + N + A   F+ R +AN  A  G Y      G  A +SL+V ++ Y
Sbjct:  226 GTLLKPNMVTAGHSCPTKYSSEEIAMATVTALRRTVPPAVSGVTFLSGGQSEEEASVNLNSINNCPLAKPWPLTFSYGRALQASALSAWRGAKSNEKAATEEFIKRAEANGLAAQGKYVSSGTCG-AAGQSLYVANHAY 363          
BLAST of CF834977 vs. ExPASy Swiss-Prot
Match: ALDCA_DANRE (Fructose-bisphosphate aldolase C-A OS=Danio rerio GN=aldoca PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.545e-28
Identity = 69/139 (49.64%), Postives = 86/139 (61.87%), Query Frame = -1
Query:  291 GTLWKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 704
            GTL KPNMVTPG   P K + + +A  TV AL+RT+P AV  V FLSGGQSEEEA+ NL+A+N  +  KPW+L+FSFGRALQ S LK W G+ EN   A   F+ R + NS A+ G Y            S ++  Y Y
Sbjct:  226 GTLLKPNMVTPGHGCPTKYSAEEVAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLSAINNCRLVKPWALTFSFGRALQASALKTWRGQRENEAAATEEFIKRAEINSLASQGKYTVCGDSSGATGLSHYLSSYAY 364          
BLAST of CF834977 vs. ExPASy Swiss-Prot
Match: ALF_LYMST (Fructose-bisphosphate aldolase (Fragment) OS=Lymnaea stagnalis PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.914e-27
Identity = 62/94 (65.96%), Postives = 71/94 (75.53%), Query Frame = -1
Query:  426 GTLWKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEE 704
            GTL KPNMVT G   PK  TP+ IA  TV AL RT+PAAV  + FLSGGQSEE+AT NLNA+NQ   +KPW L+FS+GRALQ S LKAW GK+E
Sbjct:    7 GTLLKPNMVTAGQGCPKKYTPEDIARATVTALNRTVPAAVAGITFLSGGQSEEDATINLNAINQFPGRKPWPLTFSYGRALQASVLKAWGGKDE 100          
The following BLAST results are available for this feature:
BLAST of CF834977 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALDOB_PONAB1.950e-3152.52Fructose-bisphosphate aldolase B OS=Pongo abelii G... [more]
ALF2_LAMJA2.547e-3150.36Fructose-bisphosphate aldolase, non-muscle type OS... [more]
ALF_SCHMA5.673e-3153.19Fructose-bisphosphate aldolase OS=Schistosoma mans... [more]
ALFC2_PEA1.651e-3055.56Fructose-bisphosphate aldolase 2, chloroplastic OS... [more]
ALDOB_RAT1.651e-3050.36Fructose-bisphosphate aldolase B OS=Rattus norvegi... [more]
ALF2_PLABA1.070e-2953.96Fructose-bisphosphate aldolase 2 OS=Plasmodium ber... [more]
ALDOC_CARAU3.113e-2952.52Fructose-bisphosphate aldolase C OS=Carassius aura... [more]
ALDCB_DANRE1.545e-2850.36Fructose-bisphosphate aldolase C-B OS=Danio rerio ... [more]
ALDCA_DANRE1.545e-2849.64Fructose-bisphosphate aldolase C-A OS=Danio rerio ... [more]
ALF_LYMST2.914e-2765.96Fructose-bisphosphate aldolase (Fragment) OS=Lymna... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06H12_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834977 ID=CF834977; Name=CF834977; organism=Citrus sinensis; type=EST; length=704bp
CCTTTTTTTTTTACAAAGAAACATTATCAATTATGTGACAAAATCACAGA
AACCTCTTTGAAATTAGGGGAAAGGAAAAAAAAAGAAAAACAAAACCCTT
AGCATAAACAGTTTTCAGTTTAGTTTTGATCAAAACCACTCAAACCGAAG
TTCCCAAGCTTTTTATTGCTCCACCTAAATATGAAAAAGCTCTAAAACTA
TGAATGAGAATGGGCCAACCTAATGTTCATACCGCCATTTACTCTCATAA
AGTTCATAAAGCACAACACCCAAAGCTTCAACTGTGCTTAGTATTTGTAG
TCCTTGACATGGAGAGACTCTGCGGCACCTTCACCAAGCTGGGCATCACC
CTTGTAAGTACCGAGGGTAGCCTCAGAGTTGGCCTTGCACCTGACAAGGA
AAGCAGCCTGGGCCTTCTGCACATTCTCTTCCTTTCCAGCCCATGCCTTG
AGAGTGCTCTGCTGAAGTGCACGTCCAAAGGAGAAGGAAAGTGACCATGG
CTTCTTCGTCTTGAGCTGGTTCATGGCATTAAGGTTGCGGGTAGCCTCCT
CCTCACTCTGCCCACCAGACAAGAACACAACAGCAGGAACTGCTGCAGGC
ATAGTGCGTTGCAGGGCCCGGACAGTGTGTTCAGCAATCACGTCCGGTGT
AACTTTGGGAGCTTCAGATCCAGGGGTCACCATGTTGGGCTTCCAAAGGG
TACC
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