CF834982
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834982 vs. ExPASy Swiss-Prot
Match: SODC4_MAIZE (Superoxide dismutase [Cu-Zn] 4A OS=Zea mays GN=SODCC.3 PE=2 SV=2) HSP 1 Score: 54.6842 bits (130), Expect = 5.936e-14 Identity = 26/48 (54.17%), Postives = 32/48 (66.67%), Query Frame = 2 Query: 119 KAIAVLDGSEGFKGTVSFYQEDGHHTVITVNLANLKAGSHGFHVHESG 262 KA+AVL SEG KGT+ F QE T +T +++ LK G HGFHVH G Sbjct: 3 KAVAVLGSSEGVKGTIFFTQEGDGPTTVTGSVSGLKPGLHGFHVHALG 50 HSP 2 Score: 43.5134 bits (101), Expect = 5.936e-14 Identity = 20/47 (42.55%), Postives = 27/47 (57.45%), Query Frame = 1 Query: 265 HSCYYSGKHFNPFNKSHSDIHDHEEHRHYGDLGNINVDYGDLGNINV 405 + C +G H+NP +K H D E+RH GDLGN+ + NINV Sbjct: 54 NGCMSTGPHYNPASKEHGAPED--ENRHAGDLGNVTAGADGVANINV 98
BLAST of CF834982 vs. ExPASy Swiss-Prot
Match: SODC2_ORYSJ (Superoxide dismutase [Cu-Zn] 2 OS=Oryza sativa subsp. japonica GN=SODCC2 PE=1 SV=2) HSP 1 Score: 53.5286 bits (127), Expect = 7.713e-14 Identity = 26/48 (54.17%), Postives = 32/48 (66.67%), Query Frame = 2 Query: 119 KAIAVLDGSEGFKGTVSFYQEDGHHTVITVNLANLKAGSHGFHVHESG 262 KA+AVL SEG KGT+ F QE T +T +++ LK G HGFHVH G Sbjct: 3 KAVAVLASSEGVKGTIFFSQEGDGPTSVTGSVSGLKPGLHGFHVHALG 50 HSP 2 Score: 44.2838 bits (103), Expect = 7.713e-14 Identity = 21/47 (44.68%), Postives = 26/47 (55.32%), Query Frame = 1 Query: 265 HSCYYSGKHFNPFNKSHSDIHDHEEHRHYGDLGNINVDYGDLGNINV 405 + C +G HFNP K H D E+RH GDLGNI + N+NV Sbjct: 54 NGCMSTGPHFNPTGKEHGAPQD--ENRHAGDLGNITAGADGVANVNV 98
BLAST of CF834982 vs. ExPASy Swiss-Prot
Match: SODC5_MAIZE (Superoxide dismutase [Cu-Zn] 4AP OS=Zea mays GN=SODCC.2 PE=2 SV=2) HSP 1 Score: 53.5286 bits (127), Expect = 1.302e-13 Identity = 25/48 (52.08%), Postives = 32/48 (66.67%), Query Frame = 2 Query: 119 KAIAVLDGSEGFKGTVSFYQEDGHHTVITVNLANLKAGSHGFHVHESG 262 KA+AVL S+G KGT+ F QE T +T +++ LK G HGFHVH G Sbjct: 3 KAVAVLGSSDGVKGTIFFTQEGDGPTAVTGSVSGLKPGLHGFHVHALG 50 HSP 2 Score: 43.5134 bits (101), Expect = 1.302e-13 Identity = 20/47 (42.55%), Postives = 27/47 (57.45%), Query Frame = 1 Query: 265 HSCYYSGKHFNPFNKSHSDIHDHEEHRHYGDLGNINVDYGDLGNINV 405 + C +G H+NP +K H D E+RH GDLGN+ + NINV Sbjct: 54 NGCMSTGPHYNPASKEHGAPED--ENRHAGDLGNVTAGADGVANINV 98
BLAST of CF834982 vs. ExPASy Swiss-Prot
Match: SODC_ZANAE (Superoxide dismutase [Cu-Zn] OS=Zantedeschia aethiopica GN=SODCC PE=2 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 2.198e-13 Identity = 29/48 (60.42%), Postives = 33/48 (68.75%), Query Frame = 2 Query: 119 KAIAVLDGSEGFKGTVSFYQEDGHHTVITVNLANLKAGSHGFHVHESG 262 KA+AVL GSEG +GTV F QE T IT +L+ LK G HGFHVH G Sbjct: 3 KAVAVLTGSEGVQGTVFFAQEGEGPTTITGSLSGLKPGLHGFHVHALG 50 HSP 2 Score: 39.2762 bits (90), Expect = 2.198e-13 Identity = 20/46 (43.48%), Postives = 26/46 (56.52%), Query Frame = 1 Query: 265 HSCYYSGKHFNPFNKSHSDIHDHEEHRHYGDLGNINVDYGDLGNIN 402 + C +G HFNP K H D +RH GDLGN+ V G+ G +N Sbjct: 54 NGCMSTGPHFNPAGKEHGAPED--GNRHAGDLGNVTV--GEDGTVN 95
BLAST of CF834982 vs. ExPASy Swiss-Prot
Match: SODC_SOYBN (Superoxide dismutase [Cu-Zn] OS=Glycine max GN=SOD1 PE=3 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 2.856e-13 Identity = 27/48 (56.25%), Postives = 31/48 (64.58%), Query Frame = 2 Query: 119 KAIAVLDGSEGFKGTVSFYQEDGHHTVITVNLANLKAGSHGFHVHESG 262 KA+AVL SEG GT+ F QE T +T +LA LK G HGFHVH G Sbjct: 3 KAVAVLGSSEGVTGTIFFTQEGNGPTTVTGSLAGLKPGLHGFHVHALG 50 HSP 2 Score: 40.817 bits (94), Expect = 2.856e-13 Identity = 20/51 (39.22%), Postives = 23/51 (45.10%), Query Frame = 1 Query: 265 HSCYYSGKHFNPFNKSHSDIHDHEEHRHYGDLGNINVDYGDLGNINVGPDG 417 + C +G HFNP N H D H GDLGN+NVG DG Sbjct: 54 NGCLSTGAHFNPNNNEHGAPEDENRHA------------GDLGNVNVGDDG 92
BLAST of CF834982 vs. ExPASy Swiss-Prot
Match: SODC_ANACO (Superoxide dismutase [Cu-Zn] OS=Ananas comosus GN=SOD1 PE=2 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 3.710e-13 Identity = 26/48 (54.17%), Postives = 32/48 (66.67%), Query Frame = 2 Query: 119 KAIAVLDGSEGFKGTVSFYQEDGHHTVITVNLANLKAGSHGFHVHESG 262 KA+AVL SEG KGT+ F QE T +T +++ LK G HGFHVH G Sbjct: 3 KAVAVLGSSEGVKGTIYFTQEGDGPTTVTGSISGLKPGLHGFHVHALG 50 HSP 2 Score: 40.4318 bits (93), Expect = 3.710e-13 Identity = 21/47 (44.68%), Postives = 26/47 (55.32%), Query Frame = 1 Query: 265 HSCYYSGKHFNPFNKSHSDIHDHEEHRHYGDLGNINVDYGDLGNINV 405 + C +G HFNP H D E RH GDLGN+ V G+ G +NV Sbjct: 54 NGCMSTGPHFNPAGNEHGAPED--ETRHAGDLGNVTV--GEDGTVNV 96
BLAST of CF834982 vs. ExPASy Swiss-Prot
Match: SODC_SOLCS (Superoxide dismutase [Cu-Zn] OS=Solidago canadensis var. scabra GN=SODCC PE=2 SV=3) HSP 1 Score: 53.9138 bits (128), Expect = 4.820e-13 Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 2 Query: 119 KAIAVLDGSEGFKGTVSFYQE-DGHHTVITVNLANLKAGSHGFHVHESG 262 KA+AVL SEG GT+ F QE +G T +T +L+ LK G HGFHVH G Sbjct: 3 KAVAVLSSSEGVSGTIFFSQEAEGAPTTVTGDLSGLKPGPHGFHVHALG 51 HSP 2 Score: 41.2022 bits (95), Expect = 4.820e-13 Identity = 18/37 (48.65%), Postives = 22/37 (59.46%), Query Frame = 1 Query: 265 HSCYYSGKHFNPFNKSHSDIHDHEEHRHYGDLGNINV 375 + C +G H+NP K H D EHRH GDLGN+ V Sbjct: 55 NGCMSTGPHYNPHGKDHGAPDD--EHRHAGDLGNVTV 89
BLAST of CF834982 vs. ExPASy Swiss-Prot
Match: SODC1_MESCR (Superoxide dismutase [Cu-Zn] 1 OS=Mesembryanthemum crystallinum GN=SODCC.1 PE=2 SV=1) HSP 1 Score: 53.9138 bits (128), Expect = 1.783e-12 Identity = 25/48 (52.08%), Postives = 30/48 (62.50%), Query Frame = 2 Query: 119 KAIAVLDGSEGFKGTVSFYQEDGHHTVITVNLANLKAGSHGFHVHESG 262 KA+ VL SEG GTV F QE T +T N++ L+ G HGFHVH G Sbjct: 3 KAVVVLSSSEGVSGTVQFTQEGSGPTTVTGNVSGLRPGLHGFHVHALG 50 HSP 2 Score: 39.2762 bits (90), Expect = 1.783e-12 Identity = 22/43 (51.16%), Postives = 24/43 (55.81%), Query Frame = 1 Query: 265 HSCYYSGKHFNPFNKSHSDIHDHEEHRHYGDLGNINVDYGDLG 393 + C +G HFNP K H D E RH GDLGNI V GD G Sbjct: 54 NGCMSTGPHFNPAGKEHGAPED--ETRHAGDLGNITV--GDDG 92
BLAST of CF834982 vs. ExPASy Swiss-Prot
Match: SODC_IPOBA (Superoxide dismutase [Cu-Zn] OS=Ipomoea batatas GN=SODCC PE=2 SV=2) HSP 1 Score: 55.0694 bits (131), Expect = 2.315e-12 Identity = 26/48 (54.17%), Postives = 31/48 (64.58%), Query Frame = 2 Query: 119 KAIAVLDGSEGFKGTVSFYQEDGHHTVITVNLANLKAGSHGFHVHESG 262 KA+AVL SEG GT+ F QE T +T N++ LK G HGFHVH G Sbjct: 3 KAVAVLSSSEGVSGTIFFSQEGDGPTTVTGNVSGLKPGLHGFHVHALG 50 HSP 2 Score: 37.7354 bits (86), Expect = 2.315e-12 Identity = 20/51 (39.22%), Postives = 22/51 (43.14%), Query Frame = 1 Query: 265 HSCYYSGKHFNPFNKSHSDIHDHEEHRHYGDLGNINVDYGDLGNINVGPDG 417 + C +G HFNP K H D H GDLGNI VG DG Sbjct: 54 NGCMSTGPHFNPAGKEHGAPGDDNRHA------------GDLGNITVGEDG 92
BLAST of CF834982 vs. ExPASy Swiss-Prot
Match: SODC_PAUKA (Superoxide dismutase [Cu-Zn] OS=Paulownia kawakamii GN=SODCC PE=2 SV=1) HSP 1 Score: 53.9138 bits (128), Expect = 5.073e-12 Identity = 25/48 (52.08%), Postives = 30/48 (62.50%), Query Frame = 2 Query: 119 KAIAVLDGSEGFKGTVSFYQEDGHHTVITVNLANLKAGSHGFHVHESG 262 K +AVL SEG GT+ F QE T +T N++ LK G HGFHVH G Sbjct: 3 KGVAVLSSSEGVSGTIYFTQEGDGPTTVTGNVSGLKPGPHGFHVHALG 50 HSP 2 Score: 37.7354 bits (86), Expect = 5.073e-12 Identity = 18/37 (48.65%), Postives = 21/37 (56.76%), Query Frame = 1 Query: 265 HSCYYSGKHFNPFNKSHSDIHDHEEHRHYGDLGNINV 375 + C +G HFNP K H D E RH GDLGN+ V Sbjct: 54 NGCLSTGPHFNPAGKEHGAPDD--EVRHAGDLGNVTV 88 The following BLAST results are available for this feature:
BLAST of CF834982 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834982 ID=CF834982; Name=CF834982; organism=Citrus sinensis; type=EST; length=471bpback to top |