CF834982
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834982 vs. ExPASy Swiss-Prot
Match: SODC_CEREL (Superoxide dismutase [Cu-Zn] OS=Cervus elaphus GN=SOD1 PE=2 SV=3) HSP 1 Score: 45.8246 bits (107), Expect = 4.102e-11 Identity = 21/49 (42.86%), Postives = 30/49 (61.22%), Query Frame = 2 Query: 116 SKAIAVLDGSEGFKGTVSFYQEDGHHTVITVNLANLKAGSHGFHVHESG 262 +KA+ VL G +GT+ F + GH V+T ++ L G HGFHVH+ G Sbjct: 3 TKAVCVLKGDGPVQGTIRF-EAKGHTVVVTGSITGLTEGDHGFHVHQFG 50 HSP 2 Score: 42.743 bits (99), Expect = 4.102e-11 Identity = 18/45 (40.00%), Postives = 25/45 (55.56%), Query Frame = 1 Query: 271 CYYSGKHFNPFNKSHSDIHDHEEHRHYGDLGNINVDYGDLGNINV 405 C +G HFNP +K H D E RH GDLGN+ D + +++ Sbjct: 56 CTSAGPHFNPLSKKHGGPKD--EERHVGDLGNVTADKNGVAKVDI 98
BLAST of CF834982 vs. ExPASy Swiss-Prot
Match: SODC2_BRAJU (Superoxide dismutase [Cu-Zn] 2 OS=Brassica juncea GN=SODCC2 PE=2 SV=3) HSP 1 Score: 54.299 bits (129), Expect = 5.326e-11 Identity = 29/60 (48.33%), Postives = 37/60 (61.67%), Query Frame = 2 Query: 119 KAIAVLDGSEGFKGTVSFYQEDGHHTVITVNLANLKAGSHGFHVHESGFIRATTVGNILT 298 K +AVL+ SEG KGT+ F QE T +T ++ LK G HGFHVH G TT G++ T Sbjct: 3 KGVAVLNSSEGVKGTIFFAQEGEGKTTVTGTVSGLKPGLHGFHVHALG---DTTNGSMST 59 HSP 2 Score: 33.8834 bits (76), Expect = 5.326e-11 Identity = 19/46 (41.30%), Postives = 20/46 (43.48%), Query Frame = 1 Query: 280 SGKHFNPFNKSHSDIHDHEEHRHYGDLGNINVDYGDLGNINVGPDG 417 +G HFNP K H D H GDLGNI VG DG Sbjct: 59 TGPHFNPDGKQHGAPEDANRHA------------GDLGNIIVGDDG 92
BLAST of CF834982 vs. ExPASy Swiss-Prot
Match: SODC_BRAOC (Superoxide dismutase [Cu-Zn] OS=Brassica oleracea var. capitata GN=SODCC PE=1 SV=2) HSP 1 Score: 51.2174 bits (121), Expect = 5.326e-11 Identity = 23/49 (46.94%), Postives = 31/49 (63.27%), Query Frame = 2 Query: 116 SKAIAVLDGSEGFKGTVSFYQEDGHHTVITVNLANLKAGSHGFHVHESG 262 +K +AVL+ SEG KGT+ F E T +T ++ L+ G HGFHVH G Sbjct: 2 AKGVAVLNSSEGVKGTIFFTHEGNGATTVTGTVSGLRPGLHGFHVHALG 50 HSP 2 Score: 36.965 bits (84), Expect = 5.326e-11 Identity = 21/43 (48.84%), Postives = 25/43 (58.14%), Query Frame = 1 Query: 265 HSCYYSGKHFNPFNKSHSDIHDHEEHRHYGDLGNINVDYGDLG 393 + C +G HFNP K+H D +RH GDLGNI V GD G Sbjct: 54 NGCMSTGPHFNPDGKTHGAPED--ANRHAGDLGNIIV--GDDG 92
BLAST of CF834982 vs. ExPASy Swiss-Prot
Match: SODC_ARATH (Superoxide dismutase [Cu-Zn] OS=Arabidopsis thaliana GN=SODCC PE=1 SV=2) HSP 1 Score: 49.6766 bits (117), Expect = 6.915e-11 Identity = 23/49 (46.94%), Postives = 31/49 (63.27%), Query Frame = 2 Query: 116 SKAIAVLDGSEGFKGTVSFYQEDGHHTVITVNLANLKAGSHGFHVHESG 262 +K +AVL+ SEG GT+ F QE T ++ ++ LK G HGFHVH G Sbjct: 2 AKGVAVLNSSEGVTGTIFFTQEGDGVTTVSGTVSGLKPGLHGFHVHALG 50 HSP 2 Score: 38.1206 bits (87), Expect = 6.915e-11 Identity = 20/51 (39.22%), Postives = 23/51 (45.10%), Query Frame = 1 Query: 265 HSCYYSGKHFNPFNKSHSDIHDHEEHRHYGDLGNINVDYGDLGNINVGPDG 417 + C +G HFNP K+H D H GDLGNI VG DG Sbjct: 54 NGCMSTGPHFNPDGKTHGAPEDANRHA------------GDLGNITVGDDG 92
BLAST of CF834982 vs. ExPASy Swiss-Prot
Match: SODCP_SPIOL (Superoxide dismutase [Cu-Zn], chloroplastic OS=Spinacia oleracea GN=SODCP PE=1 SV=2) HSP 1 Score: 50.447 bits (119), Expect = 8.773e-11 Identity = 22/48 (45.83%), Postives = 30/48 (62.50%), Query Frame = 2 Query: 119 KAIAVLDGSEGFKGTVSFYQEDGHHTVITVNLANLKAGSHGFHVHESG 262 KA+AVL G+ +G V+ QED T + V ++ L G HGFH+HE G Sbjct: 72 KAVAVLKGTSNVEGVVTLTQEDDGPTTVNVRISGLAPGKHGFHLHEFG 119 HSP 2 Score: 36.965 bits (84), Expect = 8.773e-11 Identity = 18/35 (51.43%), Postives = 21/35 (60.00%), Query Frame = 1 Query: 265 HSCYYSGKHFNPFNKSHSDIHDHEEHRHYGDLGNI 369 + C +G HFNP K+H D E RH GDLGNI Sbjct: 123 NGCMSTGPHFNPDKKTHGAPED--EVRHAGDLGNI 155 The following BLAST results are available for this feature:
BLAST of CF834982 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF834982 ID=CF834982; Name=CF834982; organism=Citrus sinensis; type=EST; length=471bpback to top |