CF834984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYC_SCHPO (Probable serine hydroxymethyltransferase, cytosolic OS=Schizosaccharomyces pombe GN=shm2 PE=2 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 2.994e-55 Identity = 112/203 (55.17%), Postives = 136/203 (67.00%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQK 664 LVAA +PFEY IVTTTTHKSLRGPR MIFYR +Y+ EDKINF+VFP QGGPHNH I ALAVAL QA TP F Y K V +NA A+ N +GY LV+GGT+ HLVL DL G+ G +VE++ +L NI+ NKN V GD SAL P G+R+GTPA T+RG EKDFE++ E + V+LT +I + Sbjct: 227 LVAAGVIPSPFEYADIVTTTTHKSLRGPRGAMIFYRKGTRSHDKRGNP-ILYELEDKINFSVFPGHQGGPHNHTITALAVALGQAKTPEFYQYQKDVLSNAKAMANAFITRGYKLVSGGTDTHLVLVDLTDKGVDGARVERILELVNISANKNTVPGDKSALIPRGLRLGTPACTTRGFDEKDFERVVELIDEVVSLTKKINE 428 HSP 2 Score: 25.0238 bits (53), Expect = 2.994e-55 Identity = 10/17 (58.82%), Postives = 12/17 (70.59%), Query Frame = 1 Query: 1 VADPLRALLLCDMAHIS 51 + + A LLCDMAHIS Sbjct: 209 ITEMCNAYLLCDMAHIS 225
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYC_YEAST (Serine hydroxymethyltransferase, cytosolic OS=Saccharomyces cerevisiae GN=SHM2 PE=1 SV=2) HSP 1 Score: 214.927 bits (546), Expect = 3.030e-55 Identity = 109/217 (50.23%), Postives = 144/217 (66.36%), Query Frame = 2 Query: 26 CSVIWLISVA----LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQK 664 C ++ +A L+AA +PFEY IVTTTTHKSLRGPR MIF+R + +YD E+ INF+VFP QGGPHNH I ALA ALKQA+TP FK Y QV NA AL + GY LV+ GT++H+VL LR G+ G +VE +C+ NI +NKN++ GD SAL PGGVRIG PAMT+RG+ E+DF +I +++++AV ++Q+ Sbjct: 212 CGAYLMVDMAHISGLIAAGVIPSPFEYADIVTTTTHKSLRGPRGAMIFFRRGVRSINPKTGKEVLYDLENPINFSVFPGHQGGPHNHTIAALATALKQAATPEFKEYQTQVLKNAKALESEFKNLGYRLVSNGTDSHMVLVSLREKGVDGARVEYICEKINIALNKNSIPGDKSALVPGGVRIGAPAMTTRGMGEEDFHRIVQYINKAVEFAQQVQQ 428
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYC_CAEEL (Serine hydroxymethyltransferase OS=Caenorhabditis elegans GN=mel-32 PE=1 SV=2) HSP 1 Score: 213.772 bits (543), Expect = 6.750e-55 Identity = 107/206 (51.94%), Postives = 136/206 (66.02%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYG 673 LVAA +PFEY +VTTTTHKSLRGPR +IFYR + +YD E+KIN AVFP LQGGPHNH I +AVAL+Q + F Y +QV NA L + GY+L TGGT+NHL+L DLRP+G+ G + E + DL +I NKN GD SAL PGG+R+GTPA+TSRG E+DFE++G+F+H V + + E G Sbjct: 261 LVAAGLIPSPFEYSDVVTTTTHKSLRGPRGALIFYRKGVRSTNAKGVD-TLYDLEEKINSAVFPGLQGGPHNHTIAGIAVALRQCLSEDFVQYGEQVLKNAKTLAERMKKHGYALATGGTDNHLLLVDLRPIGVEGARAEHVLDLAHIACNKNTCPGDVSALRPGGIRLGTPALTSRGFQEQDFEKVGDFIHEGVQIAKKYNAEAG 465
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYM_CANGA (Serine hydroxymethyltransferase, mitochondrial OS=Candida glabrata GN=SHM1 PE=3 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 1.469e-54 Identity = 104/204 (50.98%), Postives = 139/204 (68.14%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKE 667 LVAA +PFE+ IVTTTTHKSLRGPR MIFYR + + F+ INF+VFP QGGPHNH I ALAVALKQA TP F Y KQV +NA A G+ L +G+ LV+GGT+NHL+L +L +G+ G ++E + + NI NKN + GD SAL P G+R+GTPAMT+RG E+DF+++ E++ AV L++ ++ + Sbjct: 237 LVAANVIDSPFEHSDIVTTTTHKSLRGPRGAMIFYRKGIKKVNKKTGKETPFTFDKTINFSVFPGHQGGPHNHTISALAVALKQAKTPEFVEYQKQVVSNAKAFGDELLKRGFELVSGGTDNHLLLLNLSNMGIDGARLEAILEKINIAANKNTIPGDKSALFPSGLRVGTPAMTTRGFQEQDFKKVAEYIDNAVKLSIALKSQ 440 HSP 2 Score: 23.483 bits (49), Expect = 1.469e-54 Identity = 11/17 (64.71%), Postives = 12/17 (70.59%), Query Frame = 1 Query: 1 VADPLRALLLCDMAHIS 51 +AD A LL DMAHIS Sbjct: 219 IADGCGAYLLSDMAHIS 235
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYC_CANGA (Serine hydroxymethyltransferase, cytosolic OS=Candida glabrata GN=SHM2 PE=3 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 7.463e-54 Identity = 111/216 (51.39%), Postives = 139/216 (64.35%), Query Frame = 2 Query: 26 CSVIWLISVA----LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQ 661 C ++ +A LVAA +PFEY IVTTTTHKSLRGPR MIF+R + YD E+ INF+VFP QGGPHNH I ALA ALKQA+TP FK Y QV NA AL N GY LV+ GT++H+VL LR G+ G +VE +C+ NI +NKN++ GD SAL PGGVRIG PAMT+RG+ E+DF +I ++ +AV + Q Sbjct: 212 CGAYLMVDMAHISGLVAAGVIPSPFEYADIVTTTTHKSLRGPRGAMIFFRRGIRSVNQKTGKEIPYDLENPINFSVFPGHQGGPHNHTIAALATALKQAATPEFKEYQTQVLKNAKALENEFQTLGYRLVSNGTDSHMVLVSLREKGVDGARVEYVCEKINIALNKNSIPGDKSALVPGGVRIGAPAMTTRGMGEEDFHRIVRYIDQAVKFAEQTQ 427
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYC_ASHGO (Serine hydroxymethyltransferase, cytosolic OS=Ashbya gossypii GN=SHM2 PE=3 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 2.083e-53 Identity = 107/203 (52.71%), Postives = 134/203 (66.01%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQK 664 LVAA +PFEY IVTTTTHKSLRGPR MIF+R E +YD E INF+VFP QGGPHNH I ALA ALKQA+TP F+ Y + V NA L Y LV+ GT++H+VL LR G+ G +VE +C+ NI +NKN++ GD SAL PGGVRIG PAMT+RG+ E+DF +I +++RAV + IQ+ Sbjct: 226 LVAAGVIPSPFEYADIVTTTTHKSLRGPRGAMIFFRRGVRSVHPKTGEEVMYDLEGPINFSVFPGHQGGPHNHTISALATALKQATTPEFREYQELVLKNAKVLETEFKKLNYRLVSDGTDSHMVLVSLREKGVDGARVEHVCEKINIALNKNSIPGDKSALVPGGVRIGAPAMTTRGMGEEDFARIVGYINRAVEIARSIQQ 428 HSP 2 Score: 23.8682 bits (50), Expect = 2.083e-53 Identity = 10/17 (58.82%), Postives = 13/17 (76.47%), Query Frame = 1 Query: 1 VADPLRALLLCDMAHIS 51 +AD + A L+ DMAHIS Sbjct: 208 IADKVGAYLMVDMAHIS 224
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYM_ASHGO (Serine hydroxymethyltransferase, mitochondrial OS=Ashbya gossypii GN=SHM1 PE=3 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 2.713e-53 Identity = 104/204 (50.98%), Postives = 138/204 (67.65%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKE 667 LVAA +PFEY IVTTTTHKSLRGPR MIFYR E +YD + +INF+VFP+ QGGPHNH I ALAVALKQA+TP FK Y V NA G L+ +G+SLV+GGT+ HL+L DL P+G+ G+++E + + NI NKN + GD SAL P G+R+GTPAMT+RG +F ++ +++ AV L + ++ + Sbjct: 250 LVAAGVHPSPFEYSDIVTTTTHKSLRGPRGAMIFYRKGIRKVTKKGTE-IMYDLDKRINFSVFPAHQGGPHNHTISALAVALKQAATPEFKNYQTAVVENAKVFGEELSKRGFSLVSGGTDTHLLLIDLSPMGIDGSRLETILERLNIAANKNTIPGDKSALYPSGLRVGTPAMTTRGFGPAEFGRVAAYINEAVKLAIGLKSQ 452 HSP 2 Score: 23.483 bits (49), Expect = 2.713e-53 Identity = 10/17 (58.82%), Postives = 12/17 (70.59%), Query Frame = 1 Query: 1 VADPLRALLLCDMAHIS 51 +AD A LL DMAH+S Sbjct: 232 IADACGAYLLSDMAHVS 248
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYM_KLULA (Serine hydroxymethyltransferase, mitochondrial OS=Kluyveromyces lactis GN=SHM1 PE=3 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 4.611e-53 Identity = 107/204 (52.45%), Postives = 134/204 (65.69%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKE 667 LVAA +PFEY IVTTTTHKSLRGPR MIFYR E +YD + +INF+VFP QGGPHNH I ALAVALKQA+TP FK Y V NA G L KG+ LV+GGT+ HL+L +L LG+ G ++E L + NI NKN + GD SAL P G+R+GTPAMT+RG ++F Q+ ++ RAV L + I+ + Sbjct: 251 LVAAGVTRSPFEYSDIVTTTTHKSLRGPRGAMIFYRKGVRKVTKKGKE-VLYDLDKRINFSVFPGHQGGPHNHTISALAVALKQAATPEFKEYQAAVVENARIFGEELVKKGFELVSGGTDTHLILINLSNLGIDGARLETLLENINIAANKNTIPGDKSALFPSGLRVGTPAMTTRGFGPQEFAQVAAYIDRAVKLAIGIKSQ 453 HSP 2 Score: 23.0978 bits (48), Expect = 4.611e-53 Identity = 10/17 (58.82%), Postives = 12/17 (70.59%), Query Frame = 1 Query: 1 VADPLRALLLCDMAHIS 51 +AD A L+ DMAHIS Sbjct: 233 IADACGAYLMSDMAHIS 249
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYD_SCHPO (Probable serine hydroxymethyltransferase, cytosolic OS=Schizosaccharomyces pombe GN=SPAC24C9.12c PE=2 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.448e-51 Identity = 101/204 (49.51%), Postives = 130/204 (63.73%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKE 667 LV+A +PFEY +VTTTTHKSLRGPR MIF+R YD EDKINF+VFP QGGPHNH I ALAVALKQ PA+K Y QV NA +GY L GT++H+VL D++ G+ G + E++ +L NI NKN V D SA +P G+R+GTPAMT+RG E+DF ++ +++ RA+T +QKE Sbjct: 221 LVSAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRRGLRKHDKKGNP-IYYDLEDKINFSVFPGHQGGPHNHTITALAVALKQCQEPAYKEYQAQVVKNAKVCEEEFKKRGYKLAADGTDSHMVLVDVKSKGVDGARAERVLELINIVTNKNTVPSDKSAFSPSGIRVGTPAMTTRGFKEQDFVRVVDYIDRALTFAANLQKE 423 HSP 2 Score: 24.2534 bits (51), Expect = 1.448e-51 Identity = 10/17 (58.82%), Postives = 13/17 (76.47%), Query Frame = 1 Query: 1 VADPLRALLLCDMAHIS 51 +AD + A L+ DMAHIS Sbjct: 203 IADSVNAYLVVDMAHIS 219
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYM_YEAST (Serine hydroxymethyltransferase, mitochondrial OS=Saccharomyces cerevisiae GN=SHM1 PE=1 SV=2) HSP 1 Score: 195.282 bits (495), Expect = 2.484e-49 Identity = 101/197 (51.27%), Postives = 128/197 (64.97%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTL 646 LVAA +PFE+ IVTTTTHKSLRGPR MIF+R E Y+ E KINF+VFP QGGPHNH IGA+AVALKQA +P FK Y +++ N+ LT GY LV+GGT+NHL++ DL + G +VE + NI NKN + GD SAL P G+RIGTPAMT+RG ++F Q+ +++ AV L Sbjct: 243 LVAANVVPSPFEHSDIVTTTTHKSLRGPRGAMIFFRKGIKSVTKKGKE-IPYELEKKINFSVFPGHQGGPHNHTIGAMAVALKQAMSPEFKEYQQKIVDNSKWFAQELTKMGYKLVSGGTDNHLIVIDLSGTQVDGARVETILSALNIAANKNTIPGDKSALFPSGLRIGTPAMTTRGFGREEFSQVAKYIDSAVKL 438 The following BLAST results are available for this feature:
BLAST of CF834984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834984 ID=CF834984; Name=CF834984; organism=Citrus sinensis; type=EST; length=675bpback to top |