CF834984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYM_CANAL (Serine hydroxymethyltransferase, mitochondrial OS=Candida albicans GN=SHM1 PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 9.441e-49 Identity = 99/204 (48.53%), Postives = 132/204 (64.71%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKE 667 LV+A +PF Y IVTTTTHKSLRGPR MIF+R E Y+ E KINF VFP QGGPHNH I ALAVALKQ + P + Y ++V +NA + L KG+ LV+ GT+ HL+L DLR + G +VE + + NI NKN V GD SAL P G+R+GTPAMT+RG ++F+++ EF+ +AV + +E++ + Sbjct: 248 LVSAVVTDSPFPYSDIVTTTTHKSLRGPRGAMIFFRKGIRKVTTKGKE-IPYELERKINFLVFPGHQGGPHNHTISALAVALKQCTEPEYVKYQQEVVSNAKHFADALVSKGFKLVSDGTDTHLILVDLRSRNIDGARVEAVLERANIAANKNTVPGDVSALFPSGLRVGTPAMTTRGFGPEEFDKVAEFIDQAVNIAIELKAQ 450
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYC_ENCCU (Serine hydroxymethyltransferase, cytosolic OS=Encephalitozoon cuniculi GN=SHMT-1 PE=3 SV=2) HSP 1 Score: 177.178 bits (448), Expect = 7.001e-44 Identity = 90/201 (44.78%), Postives = 125/201 (62.19%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEI 658 LVA+ +PFE+C IV TTT K LRGPR +IFYR G D + +INFAVFP LQGGPHNH I +A AL A TP F Y ++V N+ L + L G ++TGGT+NH++L DLR G+ G VE +CD I++N+NA+ G+SS L+P G+R+GT A+T+RG ++ ++G+ + V L E+ Sbjct: 222 LVASGLMNSPFEHCDIVMTTTQKGLRGPRGALIFYRRAVTK------NGETVDLDARINFAVFPMLQGGPHNHTIAGIASALLHAGTPEFAEYTRRVVENSRELCSRLQSLGLDILTGGTDNHMLLVDLRSTGVDGAAVEHMCDALGISLNRNAIVGNSSPLSPSGIRVGTYAVTARGFGPEEMREVGDIIGGVVKLCREM 416
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA_SYMTH (Serine hydroxymethyltransferase OS=Symbiobacterium thermophilum GN=glyA PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 4.538e-43 Identity = 96/197 (48.73%), Postives = 120/197 (60.91%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 643 L A NP E+ H+VTTTTHK+LRGPR G I + +F +I+ AVFP +QGGP H I A AVA KQ S P ++AY QV NA AL L +GY LVTGGT+NHL+L DLRP G+TG E L D +ITVNKNA+ D + G+RIGTPAMT+RG+ E + QI + + RA+T Sbjct: 204 LAATGYYPNPVEHAHVVTTTTHKTLRGPRGGAILCKK---------------EFAKEIDKAVFPGMQGGPLMHIIAAKAVAFKQLSDPDYRAYCGQVVKNAKALAQALLERGYRLVTGGTDNHLMLVDLRPKGITGRDAEHLLDRVSITVNKNAIPNDPEKPMVTSGIRIGTPAMTTRGMKEAEMVQIADLIDRAIT 385
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA_HELMI (Serine hydroxymethyltransferase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=glyA PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 8.029e-43 Identity = 95/193 (49.22%), Postives = 118/193 (61.14%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLH 631 LVAA +P Y VTTTTHK+LRGPR GMI + ++ K++ A+FP LQGGP H I A AVA ++A PAF AY KQ+ ANA AL LT +G+ LV+GGT+NHL+L DLR LTG + EK D C ITVNKNA+ F S G+RIGTPA TSRG+ E +Q+ E +H Sbjct: 207 LVAAGLHPSPVPYAEFVTTTTHKTLRGPRGGMILCKQ---------------EWAAKVDKAIFPGLQGGPLMHIIAAKAVAFQEAMAPAFTAYQKQIAANAAALAKGLTDRGFQLVSGGTDNHLMLVDLRNKQLTGKEAEKRLDECRITVNKNAIPFDPQSPFVTSGIRIGTPAATSRGMDEAAMDQVAEAIH 384 HSP 2 Score: 23.8682 bits (50), Expect = 8.029e-43 Identity = 9/17 (52.94%), Postives = 14/17 (82.35%), Query Frame = 1 Query: 1 VADPLRALLLCDMAHIS 51 +AD + A+L+ DMAHI+ Sbjct: 189 IADEVGAMLMVDMAHIA 205
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA_EUBR3 (Serine hydroxymethyltransferase OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=glyA PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 1.226e-40 Identity = 90/192 (46.88%), Postives = 112/192 (58.33%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINF--AVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGE 622 LVAA +P Y H+ TTTTHK+LRGPR GMI + +DK NF A+FP +QGGP H I A AV K+A P FK Y KQ+ NA AL L +G +V+ GT+NHL+L DL P GLTG +EKL D +IT NKN + D G+R+GTPA TSRGL E DF+++ E Sbjct: 206 LVAAGLHPSPIPYAHVTTTTTHKTLRGPRGGMIL---------------CSQEMQDKYNFNKAIFPGIQGGPLMHVIAAKAVCFKEALQPEFKEYQKQIVKNAQALCKGLQSRGIKIVSDGTDNHLMLVDLTPFGLTGKSIEKLLDAAHITANKNTIPNDPQKPFVTSGIRLGTPAATSRGLKEDDFDKVAE 382 HSP 2 Score: 23.483 bits (49), Expect = 1.226e-40 Identity = 9/17 (52.94%), Postives = 14/17 (82.35%), Query Frame = 1 Query: 1 VADPLRALLLCDMAHIS 51 +AD + A+L+ DMAHI+ Sbjct: 188 IADKVDAVLMVDMAHIA 204
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA_EXIS2 (Serine hydroxymethyltransferase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=glyA PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 3.534e-40 Identity = 91/192 (47.40%), Postives = 114/192 (59.38%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 628 LVAA NP E+ H VTTTTHK+LRGPR GMI + + I+ ++FP +QGGP H I A AVA +A P FK Y +QV ANA LG LT +G +V+GGT+NHL+L DL+PLG+TG E D ITVNKN + F +S G+RIGT AMTSRG E + +QI E + Sbjct: 209 LVAAGLHPNPVEHAHFVTTTTHKTLRGPRGGMILCKE---------------EHAKAIDKSIFPGIQGGPLMHVIAAKAVAFAEALAPEFKDYIEQVVANAKVLGEELTARGLRIVSGGTDNHLLLVDLQPLGITGKLAEHALDEAGITVNKNTIPFDPASPFVTSGIRIGTAAMTSRGFKEAEMKQIAELI 385 HSP 2 Score: 22.7126 bits (47), Expect = 3.534e-40 Identity = 9/17 (52.94%), Postives = 13/17 (76.47%), Query Frame = 1 Query: 1 VADPLRALLLCDMAHIS 51 +AD + A L+ DMAHI+ Sbjct: 191 IADSVGAYLMVDMAHIA 207
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA_BACSK (Serine hydroxymethyltransferase OS=Bacillus clausii (strain KSM-K16) GN=glyA PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 3.534e-40 Identity = 94/198 (47.47%), Postives = 117/198 (59.09%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTL 646 LVAA NP Y H VTTTTHK+LRGPR GMI E +F K++ ++FP +QGGP H I A AVA +A + FK YAKQ+ ANA LG L +G +V+GGT+NHL+L DLR L LTG EK D IT NKNA+ F G+RIGT A+TSRG E + ++IGE + A+TL Sbjct: 204 LVAAGLHQNPVPYAHFVTTTTHKTLRGPRGGMILCN-----------EETAEEFGKKLDKSIFPGIQGGPLMHVIAAKAVAFGEALSDEFKTYAKQIIANAKRLGEKLQAEGVDIVSGGTDNHLLLLDLRSLQLTGKVAEKALDAVGITTNKNAIPFDPEKPFVTSGIRIGTAAVTSRGFGENEMDEIGELI--ALTL 388 HSP 2 Score: 22.7126 bits (47), Expect = 3.534e-40 Identity = 9/17 (52.94%), Postives = 13/17 (76.47%), Query Frame = 1 Query: 1 VADPLRALLLCDMAHIS 51 +AD + A L+ DMAHI+ Sbjct: 186 IADEVGAYLMVDMAHIA 202
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA_HYPME (Serine hydroxymethyltransferase OS=Hyphomicrobium methylovorum GN=glyA PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.366e-39 Identity = 93/203 (45.81%), Postives = 117/203 (57.64%), Query Frame = 2 Query: 35 IWLISVA----LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 628 I+L+ +A LVAA +PF + H+VTTTTHK+LRGPR GMI D KIN A+FP +QGGP H I AVA +A P FK Y KQV NA ALG L G++LV+GGT+ HLVL DLRP LTG K EK NIT NKN + F + G+R+G+PA T+RG +F++IG + Sbjct: 209 IFLVDMAHFAGLVAAGLIPSPFPHAHVVTTTTHKTLRGPRGGMILTNDA--------------DIAKKINSAIFPGIQGGPLMHVIAGKAVAFGEALRPDFKVYIKQVMDNARALGEVLVQNGFALVSGGTDTHLVLVDLRPKKLTGTKAEKALGRANITCNKNGIPFDPEKPMVTSGIRLGSPAGTTRGFGVAEFQEIGRLI 397
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA_ANATD (Serine hydroxymethyltransferase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=glyA PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.729e-39 Identity = 90/197 (45.69%), Postives = 118/197 (59.90%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 643 LVAA +P EY VTTTTHK+LRGPR G+I + + I+ ++FP +QGGP H I A AVALK+A T FK Y Q+ NA AL L +G+ LV+GGT+NHL+L DLR G+TG EK+ D NIT NKNAV F S + G+R+GTPA+T+RG E D ++ + +H A+T Sbjct: 207 LVAAGLHPSPVEYADFVTTTTHKTLRGPRGGLILCKEK---------------YAKLIDKSIFPGIQGGPLEHVIAAKAVALKEAMTEEFKNYQVQILKNAKALSTRLIERGFRLVSGGTDNHLMLVDLRNKGITGKDAEKILDEHNITCNKNAVPFDTQSPMITSGIRLGTPAVTTRGFKEGDMLEVADIIHDALT 388 HSP 2 Score: 22.7126 bits (47), Expect = 1.729e-39 Identity = 9/17 (52.94%), Postives = 13/17 (76.47%), Query Frame = 1 Query: 1 VADPLRALLLCDMAHIS 51 +AD + A L+ DMAHI+ Sbjct: 189 IADEVGAYLMVDMAHIA 205
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA_CALS8 (Serine hydroxymethyltransferase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=glyA PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 2.935e-39 Identity = 88/197 (44.67%), Postives = 118/197 (59.90%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 643 LVAA +P EY VTTTTHK+LRGPR G+I + + I+ ++FP +QGGP H I A AVALK+A T F+ Y Q+ NA AL L +G+ LV+GGT+NHL+L DLR G+TG EK D NIT NKNA+ F S + G+R+GTPA+T+RG E+D ++ + +H A+T Sbjct: 209 LVAAGLHPSPVEYADFVTTTTHKTLRGPRGGLILCKEK---------------YAKLIDKSIFPGIQGGPLEHVIAAKAVALKEAMTEEFRNYQIQILKNAKALSERLIERGFRLVSGGTDNHLMLVDLRNKGITGKDAEKRLDSLNITCNKNAIPFDTQSPMVTSGIRLGTPAVTTRGFKEEDMIEVADIIHDALT 390 HSP 2 Score: 22.7126 bits (47), Expect = 2.935e-39 Identity = 9/17 (52.94%), Postives = 13/17 (76.47%), Query Frame = 1 Query: 1 VADPLRALLLCDMAHIS 51 +AD + A L+ DMAHI+ Sbjct: 191 IADEVGAYLMVDMAHIA 207 The following BLAST results are available for this feature:
BLAST of CF834984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834984 ID=CF834984; Name=CF834984; organism=Citrus sinensis; type=EST; length=675bpback to top |