CF834984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA_DICT6 (Serine hydroxymethyltransferase OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=glyA PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.044e-39 Identity = 88/197 (44.67%), Postives = 115/197 (58.38%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 643 LVAA +P Y H VT+TTHK+LRGPR G I + +F +I+ AVFP +QGGP H I A AVA K+A TP FK Y KQ+ NA A+ L GY LV+GGT+NHL+L DLR G+TG + EK + ITVNKNA+ F G+RIGTPA+T+RG+ E + + +H ++ Sbjct: 204 LVAAGLHPSPVPYAHFVTSTTHKTLRGPRGGFILCKK---------------EFAKEIDKAVFPGIQGGPLMHVIAAKAVAFKEAMTPEFKEYQKQIILNAKAMAEELMRLGYRLVSGGTDNHLMLVDLRDKGITGKEAEKALEEAGITVNKNAIPFDPQPPTVTSGIRIGTPALTTRGMKEDEMRYVARLIHEVLS 385
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA_PELTS (Serine hydroxymethyltransferase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=glyA PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 3.976e-39 Identity = 91/196 (46.43%), Postives = 118/196 (60.20%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 640 LVAA +P Y +VTTTTHK+LRGPR G+I + + KIN AVFP +QGGP H I A AVA K+A P FK Y +++ +NA AL + L +G+ LV+GGT+NHL+L DLR +TG + ++L D +TVNKNAV F G+RIGTPA+TSRGL E D QI E + A+ Sbjct: 207 LVAAGLHMSPVPYADVVTTTTHKTLRGPRGGLILCKDAER-------------YGTKINRAVFPGVQGGPLMHVIAAKAVAFKEAMEPGFKEYQRKIVSNARALADALLERGFELVSGGTDNHLILVDLRSKKITGREAQELFDAVGVTVNKNAVPFDPQPPNIASGIRIGTPAVTSRGLNEDDMVQIAEIMDYAI 389
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA_CHLTE (Serine hydroxymethyltransferase OS=Chlorobium tepidum GN=glyA PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 3.976e-39 Identity = 91/201 (45.27%), Postives = 115/201 (57.21%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIF----YRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 643 LVAA +ANP +CH VTTTTHK+LRGPR GMI + V + I+ V P +QGGP H I AVA +A P FKAYA+Q+K NA A+ GY +V+GGT+NHL+L DLR + G E L ITVNKN V F D S G+RIGTPAMT+RG+ + E+I EF+ R ++ Sbjct: 206 LVAAGLSANPMPHCHFVTTTTHKTLRGPRGGMIMMGKDFENPLGLTINTKNGSRVKMMSEVIDAEVMPGIQGGPLMHIIAGKAVAFGEALQPEFKAYAQQIKDNAAAMAAKFLAAGYHIVSGGTKNHLMLLDLRNKNVNGKVAENLLHEAGITVNKNMVPFDDKSPFVTSGIRIGTPAMTTRGMKVAEAEKIVEFIDRVIS 406
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA_DICTD (Serine hydroxymethyltransferase OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=glyA PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 6.781e-39 Identity = 88/197 (44.67%), Postives = 115/197 (58.38%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 643 LVAA +P Y H VT+TTHK+LRGPR G I + +F +I+ AVFP +QGGP H I A AVA K+A +P FK Y KQ+ NA A+ L GY LV+GGT+NHL+L DLR G+TG + EK + ITVNKNA+ F G+RIGTPA+T+RG+ E + I +H ++ Sbjct: 204 LVAAGLHPSPVPYAHFVTSTTHKTLRGPRGGFILCKK---------------EFAKEIDKAVFPGIQGGPLMHVIAAKAVAFKEAMSPEFKEYQKQIVLNAKAMAEELIKLGYRLVSGGTDNHLMLVDLRDKGITGKEAEKALEEAGITVNKNAIPFDPQPPTITSGIRIGTPALTTRGMKEDEMRYIARLIHEVLS 385
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA_BRASB (Serine hydroxymethyltransferase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=glyA PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 6.781e-39 Identity = 88/192 (45.83%), Postives = 110/192 (57.29%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 628 LVA A+P + HIVTTTTHKSLRGPR G+I + F K+N A+FP LQGGP H I A AVA +A P FK YAK + NA AL L +G+ +V+GGT+NHL+L DLRP GL GN EK IT NKN + F G+R+GTPA T+RG +F+Q+G + Sbjct: 220 LVAGGAHASPVPHAHIVTTTTHKSLRGPRGGLILWNDE--------------QFTKKLNSAIFPGLQGGPLMHVIAAKAVAFAEALRPEFKTYAKNIVENAKALAESLRAQGFDIVSGGTDNHLMLVDLRPKGLKGNVSEKALVRAGITCNKNGIPFDPEKPFVTSGLRLGTPAATTRGFGVAEFQQVGSLI 397
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA_BRASO (Serine hydroxymethyltransferase OS=Bradyrhizobium sp. (strain ORS278) GN=glyA PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 8.451e-39 Identity = 89/192 (46.35%), Postives = 109/192 (56.77%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 628 LVA A+P Y HI TTTTHKSLRGPR G++ + F K N A+FP LQGGP H I A AVA +A P FKAYAK V NA AL L +G+ +V+GGT+NHL+L DLRP GL GN EK IT NKN + F G+R+GTPA T+RG +F+Q+G + Sbjct: 219 LVAGGVHASPVPYAHITTTTTHKSLRGPRGGLMLWNDE--------------QFTKKFNSAIFPGLQGGPLMHVIAAKAVAFAEALRPEFKAYAKNVVENAKALAESLRAQGFDIVSGGTDNHLMLVDLRPKGLKGNVSEKALVRAAITCNKNGIPFDPEKPFVTSGLRLGTPAATTRGFGVAEFQQVGSLI 396 HSP 2 Score: 21.9422 bits (45), Expect = 8.451e-39 Identity = 9/17 (52.94%), Postives = 12/17 (70.59%), Query Frame = 1 Query: 1 VADPLRALLLCDMAHIS 51 +AD + A LL DMAH + Sbjct: 201 IADSVGAYLLVDMAHFA 217
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA_CARHZ (Serine hydroxymethyltransferase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=glyA PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 8.454e-39 Identity = 88/192 (45.83%), Postives = 118/192 (61.46%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 628 LVAA +P Y +VTTTTHK+LRGPR G+IF + + KI+ VFP +QGGP H I A AVA K+A +P F+ Y +QV NA AL L +G LV+GGT+NHL+L D+RP+GLTG + E+L D +TVNKNA+ + S G+RIGTPA+T+RG+ E + +I E + Sbjct: 208 LVAAGLHPSPIPYADVVTTTTHKTLRGPRGGVIFCKA---------------EHAAKIDKTVFPGVQGGPLMHVIAAKAVAFKEALSPEFREYQQQVVNNAKALAEELKKQGLRLVSGGTDNHLMLVDVRPVGLTGKRAEQLLDEIGVTVNKNAIPYDPESPNVTSGIRIGTPAVTTRGMKEGEMAEIAEII 384 HSP 2 Score: 22.7126 bits (47), Expect = 8.454e-39 Identity = 9/17 (52.94%), Postives = 13/17 (76.47%), Query Frame = 1 Query: 1 VADPLRALLLCDMAHIS 51 +AD + A L+ DMAHI+ Sbjct: 190 IADEVGAYLMVDMAHIA 206
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA_CYAP8 (Serine hydroxymethyltransferase OS=Cyanothece sp. (strain PCC 8801) GN=glyA PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.101e-38 Identity = 86/192 (44.79%), Postives = 115/192 (59.90%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 628 LVA +P YC +VTTTTHK+LRGPR G+I R D + + AVFP QGGP H I A VA +A P FKAY+ QV AN+ AL L +G+ LV+GGT+NHL+L DLR +G+TG + ++L NIT NKN V F S G+R+G+PA+T+RG+ E +F++IG + Sbjct: 209 LVATGHHPSPISYCDVVTTTTHKTLRGPRGGLILTRDA--------------DLGKQFDKAVFPGTQGGPLEHVIAAKGVAFGEALKPQFKAYSGQVIANSRALAAQLMERGFKLVSGGTDNHLMLVDLRSIGMTGKEADRLVSEINITANKNTVPFDPESPFVTSGLRLGSPALTTRGMGESEFKEIGNII 386 HSP 2 Score: 21.9422 bits (45), Expect = 1.101e-38 Identity = 8/17 (47.06%), Postives = 13/17 (76.47%), Query Frame = 1 Query: 1 VADPLRALLLCDMAHIS 51 +AD + A L+ D+AHI+ Sbjct: 191 IADEIGAYLMADIAHIA 207
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA_ALKOO (Serine hydroxymethyltransferase OS=Alkaliphilus oremlandii (strain OhILAs) GN=glyA PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 1.102e-38 Identity = 88/192 (45.83%), Postives = 113/192 (58.85%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 628 LVAA NP +Y VTTTTHK+LRGPR G I + + I+ A+FP LQGGP H I A AV+ K+A +P FKAY +QV NA LG L +G++LV+GGT+NHL+L DLR +TG EKL D +TVNKN + + S G+RIGTPA+T+RG+ E D I E + Sbjct: 206 LVAAGLHENPCDYADFVTTTTHKTLRGPRGGAILCKEK---------------YAKMIDKAIFPGLQGGPLMHVIAAKAVSFKEALSPEFKAYQEQVIKNAAKLGEELKSRGFNLVSGGTDNHLLLLDLRNKNITGKDAEKLLDEVGVTVNKNTIPYDPESPFVTSGIRIGTPAVTTRGMKEDDMVTIAEII 382 HSP 2 Score: 22.7126 bits (47), Expect = 1.102e-38 Identity = 9/17 (52.94%), Postives = 13/17 (76.47%), Query Frame = 1 Query: 1 VADPLRALLLCDMAHIS 51 +AD + A L+ DMAHI+ Sbjct: 188 IADEVGAYLMVDMAHIA 204
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA2_PHOPR (Serine hydroxymethyltransferase 2 OS=Photobacterium profundum GN=glyA2 PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.157e-38 Identity = 90/205 (43.90%), Postives = 112/205 (54.63%), Query Frame = 2 Query: 17 GPFCSVIWLISVALVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 628 G F V L+AA E +P + H++TTTTHK+LRGPR GMI + D KIN AVFP LQGGP H I AVA +A P FK Y K V +NA L L +G +VT GT+ HL+L DLRP GL GN E + IT NKN + F + G+R+GTPA TSRG +F+QIGE++ Sbjct: 205 GAFLMVDMAHIAGLIAAGEHPSPIPHAHVITTTTHKTLRGPRGGMILTN--------------LEDINKKINSAVFPGLQGGPLMHVIAGKAVAFGEALEPDFKIYIKNVISNAKVLAEVLQNRGCDIVTNGTDTHLMLVDLRPKGLKGNAAENALERAGITCNKNGIPFDTEKPMVTSGIRLGTPAGTSRGFGNDEFKQIGEWI 395 The following BLAST results are available for this feature:
BLAST of CF834984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834984 ID=CF834984; Name=CF834984; organism=Citrus sinensis; type=EST; length=675bpback to top |