CF834984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA_CHLP8 (Serine hydroxymethyltransferase OS=Chlorobaculum parvum (strain NCIB 8327) GN=glyA PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 9.792e-38 Identity = 89/201 (44.28%), Postives = 114/201 (56.72%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIF----YRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 643 LVAA +ANP +CH VTTTTHK+LRGPR GMI + V + I+ V P +QGGP H I AVA +A P FKAYA+Q+K NA A+ Y +V+GGT+NHL+L DLR + G E L ITVNKN V F D S G+R+GTPAMT+RG+ + E+I EF+ R ++ Sbjct: 206 LVAAGLSANPVPHCHFVTTTTHKTLRGPRGGMIMMGKDFENPMGITVNTKNGPRVKMMSEVIDAEVMPGIQGGPLMHIIAGKAVAFGEALQPEFKAYAQQIKDNAAAMAAKFLAADYHIVSGGTKNHLMLLDLRNKNVNGKVAENLLHDAGITVNKNMVPFDDKSPFVTSGIRVGTPAMTTRGMKVAEAEKIVEFIDRVIS 406
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA_MICAN (Serine hydroxymethyltransferase OS=Microcystis aeruginosa (strain NIES-843) GN=glyA PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.190e-37 Identity = 85/192 (44.27%), Postives = 112/192 (58.33%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 628 LVA NP +C +VTTTTHK+LRGPR G+I + + K + +VFP QGGP H + A AVA +A P FK Y+ QV ANA AL L +G +VT GT+NHL+L DLR +G+TG + ++L NIT NKN V F S G+R+G+PAMT+RGL E +F +IG + Sbjct: 209 LVATGHHPNPLPHCDVVTTTTHKTLRGPRGGLIMTKDE--------------ELGKKFDKSVFPGTQGGPLEHVVAAKAVAFGEALKPEFKIYSGQVIANAQALAGQLKARGIKIVTDGTDNHLMLLDLRSVGMTGKEADRLVSTINITANKNTVPFDPESPFVTSGLRLGSPAMTTRGLGETEFIEIGNII 386 HSP 2 Score: 21.557 bits (44), Expect = 1.190e-37 Identity = 8/17 (47.06%), Postives = 13/17 (76.47%), Query Frame = 1 Query: 1 VADPLRALLLCDMAHIS 51 +AD + A L+ D+AHI+ Sbjct: 191 IADEVGAYLMADIAHIA 207
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA_GEOBB (Serine hydroxymethyltransferase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=glyA PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.191e-37 Identity = 89/192 (46.35%), Postives = 108/192 (56.25%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 628 LVAA +P Y VTTTTHK+LRGPR GMI R D+ +N +FP +QGGP H I A AVA K+A TP FK Y Q+ NA AL LT +G+ L +GGT+NHL+L DL LTG E+ D ITVNKN + F S G+RIGTPA TS GL E + EQ+ F+ Sbjct: 204 LVAAGLHPSPVPYAEFVTTTTHKTLRGPRGGMIMCRE---------------DWAKTLNSNIFPGIQGGPLMHVIAAKAVAFKEALTPEFKQYQGQIVKNAKALAEGLTKRGFKLTSGGTDNHLMLVDLSQTELTGKVAEEALDRAGITVNKNGIPFDTRSPFITSGIRIGTPAATSHGLKEAEMEQVAGFI 380 HSP 2 Score: 22.3274 bits (46), Expect = 1.191e-37 Identity = 8/17 (47.06%), Postives = 14/17 (82.35%), Query Frame = 1 Query: 1 VADPLRALLLCDMAHIS 51 +AD + A+++ DMAHI+ Sbjct: 186 IADKVGAVVMVDMAHIA 202
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA_RICPU (Serine hydroxymethyltransferase OS=Rickettsia peacockii (strain Rustic) GN=glyA PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.279e-37 Identity = 86/192 (44.79%), Postives = 113/192 (58.85%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 628 LVA E +P Y H VT+TTHK+LRGPR G+I + + KIN A+FP LQGGP H I A AVA + P +K+Y +QV +NA AL + L +GY ++TGGT+NH+VL DLR G+TG D IT NKNA+ F ++S G+R+GTPA T+RG EKDF +G + Sbjct: 208 LVATGEHQSPIPYAHAVTSTTHKTLRGPRGGLILSKDE--------------EIGHKINSALFPGLQGGPLMHIIAAKAVAFLENLQPEYKSYIQQVISNAKALASSLQERGYDILTGGTDNHIVLVDLRKDGITGKLAANSLDRAGITCNKNAIPFDETSPFITSGIRLGTPACTTRGFKEKDFVLVGHMV 385
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA2_SULDN (Serine hydroxymethyltransferase 2 OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=glyA2 PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.279e-37 Identity = 88/188 (46.81%), Postives = 112/188 (59.57%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS-SALAPGGVRIGTPAMTSRGLLEKDFEQI 616 LVAA E +PF + H+VTTTTHK+LRGPR GMI + KIN A+FP +QGGP H I A AVA K+ P+++ YAKQVKANA L LT +GY LV+GGT+NHLVL +G + + ITVNKN V D+ S G+RIG+PA+T+RG+ E +FE I Sbjct: 208 LVAADEHMSPFPHAHVVTTTTHKTLRGPRGGMIMTDDE--------------EIAKKINSAIFPGIQGGPLVHVIAAKAVAFKEILDPSWREYAKQVKANAKVLEVVLTKRGYDLVSGGTDNHLVLVSFLNRDFSGKDADAALERAGITVNKNGVPNDTRSPFITSGIRIGSPALTARGMKEAEFELI 381
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA1_RHIME (Serine hydroxymethyltransferase 1 OS=Rhizobium meliloti GN=glyA1 PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 1.550e-37 Identity = 86/192 (44.79%), Postives = 107/192 (55.73%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 628 LVA + +PF +CH+ TTTTHKSLRGPR GMI + KIN AVFP LQGGP H I A AVAL +A P+FK YA QV NA L L G +V+GGT+NHL+L DLR TG + E +T NKN + F GVR+G PA T+RG E +F+++GE + Sbjct: 214 LVAGGQHPSPFPHCHVATTTTHKSLRGPRGGMILTNDE--------------EIAKKINSAVFPGLQGGPLMHVIAAKAVALGEALQPSFKDYAAQVVKNARTLAETLKANGLDIVSGGTDNHLMLVDLRKKNATGKRAEAALGRAYVTCNKNGIPFDPEKPFVTSGVRLGAPAGTTRGFKEAEFKEVGELI 391 HSP 2 Score: 22.3274 bits (46), Expect = 1.550e-37 Identity = 9/17 (52.94%), Postives = 13/17 (76.47%), Query Frame = 1 Query: 1 VADPLRALLLCDMAHIS 51 +AD + A L+ DMAHI+ Sbjct: 196 IADEVGAWLMVDMAHIA 212
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA_GEOSM (Serine hydroxymethyltransferase OS=Geobacter sp. (strain M21) GN=glyA PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 1.551e-37 Identity = 88/192 (45.83%), Postives = 109/192 (56.77%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 628 LVAA +P Y VTTTTHK+LRGPR GMI R ++ +N +FP +QGGP H I A AVA K+A TP FK Y +Q+ NA AL LT +G+ L +GGT+NHL+L DL LTG E+ D ITVNKN + F S G+RIGTPA TS GL E + EQ+ F+ Sbjct: 204 LVAAGLHPSPVPYAEFVTTTTHKTLRGPRGGMIMCRE---------------EWAKTLNSNIFPGIQGGPLMHVIAAKAVAFKEALTPEFKKYQEQIVKNAKALAEGLTKRGFKLTSGGTDNHLMLVDLSQTELTGKVAEEALDRAGITVNKNGIPFDTRSPFITSGIRIGTPAATSHGLKEAEMEQVAGFI 380 HSP 2 Score: 22.3274 bits (46), Expect = 1.551e-37 Identity = 8/17 (47.06%), Postives = 14/17 (82.35%), Query Frame = 1 Query: 1 VADPLRALLLCDMAHIS 51 +AD + A+++ DMAHI+ Sbjct: 186 IADKVGAVVMVDMAHIA 202
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA_OCEIH (Serine hydroxymethyltransferase OS=Oceanobacillus iheyensis GN=glyA PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 1.551e-37 Identity = 88/201 (43.78%), Postives = 118/201 (58.71%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLE 655 LVA E NP + VTTTTHK+LRGPR GMI + +F K++ A+FP +QGGP H I A AV+ K+A + FKAY+KQ+ ANA LG L +G +V+GGT+NHL+L D+ PL LTG EK D IT NKN + F S G+RIGT A+T+RG E++ ++I ++LTL+ Sbjct: 204 LVATGEHENPVPHADFVTTTTHKTLRGPRGGMILCKE---------------EFAKKVDKAIFPGIQGGPLMHVIAAKAVSFKEALSDDFKAYSKQIVANAKLLGEALNKEGIRIVSGGTDNHLLLLDVTPLQLTGKVAEKALDDIGITTNKNTIPFDQESPFVTSGIRIGTAAVTTRGFGEEEMKEIASI----ISLTLK 385 HSP 2 Score: 22.7126 bits (47), Expect = 1.551e-37 Identity = 9/17 (52.94%), Postives = 13/17 (76.47%), Query Frame = 1 Query: 1 VADPLRALLLCDMAHIS 51 +AD + A L+ DMAHI+ Sbjct: 186 IADAVDAYLMVDMAHIA 202
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA_SILPO (Serine hydroxymethyltransferase OS=Silicibacter pomeroyi GN=glyA1 PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.670e-37 Identity = 88/196 (44.90%), Postives = 110/196 (56.12%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 640 LVAA E +PF + H+ TTTTHK+LRGPR GMI D K+N A+FP +QGGP H I A AVA +A P FK Y +QV ANA AL + L G VT GT+ H+VL DLRP G+ GN EK +IT NKN V F G+R+G+PA T+RG E +F QI +++ V Sbjct: 215 LVAAGEHPSPFPHAHVATTTTHKTLRGPRGGMILTNDE--------------DIAKKVNSAIFPGIQGGPLMHVIAAKAVAFGEALRPEFKTYIQQVIANAQALSDQLIKGGLDTVTHGTDTHVVLVDLRPKGVKGNATEKALGRAHITCNKNGVPFDPEKPTVTSGIRLGSPAGTTRGFAETEFRQIADWIIEVV 396
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA_PETMO (Serine hydroxymethyltransferase OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=glyA PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.670e-37 Identity = 87/201 (43.28%), Postives = 115/201 (57.21%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS-SALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLE 655 LVAA NP EY H+VT+TTHK+LRGPR G+I D IN +FP +QGGP H I A AVA K+A + FK Y KQV N+ AL N L K +V+GGT+ HL L DL L +TG +EK C+ITVNKN V ++ S G+RIGTPA+T+RG+ E++ ++I + + L+ Sbjct: 205 LVAAGIHPNPVEYAHVVTSTTHKTLRGPRGGIILTNDS--------------DIYKSINKIIFPGIQGGPLEHIIAAKAVAFKEAMSGEFKEYQKQVVRNSKALSNELASKNLRIVSGGTDTHLFLVDLSELNITGKALEKALGQCDITVNKNTVPKETLSPFVTSGIRIGTPAVTTRGMKEEEMKEIASMIAKVANNVLD 391 The following BLAST results are available for this feature:
BLAST of CF834984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834984 ID=CF834984; Name=CF834984; organism=Citrus sinensis; type=EST; length=675bpback to top |