CF834984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA_DESRM (Serine hydroxymethyltransferase OS=Desulfotomaculum reducens (strain MI-1) GN=glyA PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.670e-37 Identity = 88/198 (44.44%), Postives = 118/198 (59.60%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTL 646 LVAA +P Y +VTTTTHK+LRGPR GMI + ++ I+ A+FP QGGP H I A A A +A P FKAY +Q+ NA AL L +G++LV+GGT+NHL+L DLR G+TG + E L D +IT NKNA+ F G+R+GTPA+T+RG EKD +++ E + A+TL Sbjct: 206 LVAAGLHQSPVPYADVVTTTTHKTLRGPRGGMILCKE---------------EYAQLIDKAIFPGSQGGPLMHVIAAKAAAFGEALKPEFKAYQQQIINNAQALAKGLLERGFNLVSGGTDNHLILVDLRGTGITGKQAETLLDEVHITCNKNAIPFDPEKPFVTSGIRLGTPAVTTRGFKEKDMDKVAEII--ALTL 386
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA_CAUCR (Serine hydroxymethyltransferase OS=Caulobacter crescentus GN=glyA PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.670e-37 Identity = 87/196 (44.39%), Postives = 113/196 (57.65%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 640 L+A ANP + HIVTTTTHK+LRGPR G++ K+N AVFP LQGGP H I A AVA +A P+FK YA+QV ANA AL L G ++V+GGT++HL+L DLRP G+TG E + +T NKN V F + G+R+GTPA T+RG E +F ++GE + V Sbjct: 215 LIAGGAYANPIPHAHIVTTTTHKTLRGPRGGLVLTNDEAIIK--------------KVNSAVFPGLQGGPLEHVIAAKAVAFGEALQPSFKDYARQVVANARALAEALLKSGVNIVSGGTDSHLMLVDLRPKGVTGRDAEHSLERAYMTCNKNGVPFDTAPFTITSGIRLGTPAGTTRGFKEAEFTRVGELIGEVV 396
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA_PARD8 (Serine hydroxymethyltransferase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=glyA PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 2.020e-37 Identity = 88/195 (45.13%), Postives = 113/195 (57.95%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFY-RXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPL--GLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 628 L+AA NP EY HIVT+TTHK+LRGPR G+I + +G + ++ AVFP +QGGP H I A AVA +A P +K Y QVKANA A+ T KGY +++GGT+NH +L DLR LTG EK +ITVNKN V F SA G+R+GTPA+T+RG E +I E + Sbjct: 200 LIAAGLLNNPLEYAHIVTSTTHKTLRGPRGGIILLGKDFENPWGKKTPKGEIKKMSQLLDSAVFPGIQGGPLEHVIAAKAVAFGEALEPEYKTYQAQVKANAAAMAKAFTDKGYKIISGGTDNHSMLIDLRTKFPDLTGKVAEKALVAADITVNKNMVPFDSRSAFQTSGIRVGTPAITTRGAKEPLMGEIVELI 394 HSP 2 Score: 22.7126 bits (47), Expect = 2.020e-37 Identity = 9/15 (60.00%), Postives = 12/15 (80.00%), Query Frame = 1 Query: 1 VADPLRALLLCDMAH 45 +AD + ALL+ DMAH Sbjct: 182 IADKVGALLMIDMAH 196
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA_SYNR3 (Serine hydroxymethyltransferase OS=Synechococcus sp. (strain RCC307) GN=glyA PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 2.020e-37 Identity = 84/192 (43.75%), Postives = 113/192 (58.85%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 628 LVAA +P +CH+VTTTTHK+LRGPR G+I DF + + AVFP QGGP H + A AVA +A P+FK Y++QV ANA AL L +G ++V+GGT+NH+VL DLR +G+TG + L NIT NKN V F S G+R+GT A+T+RG E F ++ + + Sbjct: 207 LVAAGVHPSPVPHCHVVTTTTHKTLRGPRGGLILCNDA--------------DFAKQFDKAVFPGTQGGPLEHVVAAKAVAFGEALQPSFKQYSQQVVANAQALAERLQERGIAVVSGGTDNHVVLLDLRGIGMTGKVADLLVSEVNITANKNTVPFDPESPFVTSGLRLGTAALTTRGFDEAAFSEVADVI 384 HSP 2 Score: 23.8682 bits (50), Expect = 2.020e-37 Identity = 10/17 (58.82%), Postives = 13/17 (76.47%), Query Frame = 1 Query: 1 VADPLRALLLCDMAHIS 51 +AD + A LL DMAHI+ Sbjct: 189 IADEVGAYLLADMAHIA 205
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA_THEP1 (Serine hydroxymethyltransferase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=glyA PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.181e-37 Identity = 83/192 (43.23%), Postives = 109/192 (56.77%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS-SALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 628 LVAA NP EY H+VT+TTHK+LRGPR G+I D ++ +FP +QGGP H I A AV K+A T FK Y KQV NA + +GY +V+GGT+ HL L DL P +TG EK + C ITVNKN + + S G+RIGTPA+T+RG+ E++ E+I E + Sbjct: 205 LVAAGIHPNPLEYAHVVTSTTHKTLRGPRGGLILTNDP--------------DIAKAVDKTIFPGIQGGPLMHVIAAKAVCFKEAMTEEFKEYQKQVVKNAKKMAEEFQKRGYRIVSGGTDTHLFLVDLTPKDITGKAAEKALESCGITVNKNTIPNEKRSPFVASGIRIGTPAVTTRGMKEEEMEEIAEMI 382
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA_RICRS (Serine hydroxymethyltransferase OS=Rickettsia rickettsii (strain Sheila Smith) GN=glyA PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.181e-37 Identity = 86/192 (44.79%), Postives = 112/192 (58.33%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 628 LVA E +P Y H VT+TTHK+LRGPR G+I + KIN A+FP LQGGP H I A AVA + P +K+Y +QV +NA AL + L +GY ++TGGT+NH+VL DLR G+TG D IT NKNA+ F ++S G+R+GTPA T+RG EKDF +G + Sbjct: 208 LVATGEHQSPIPYAHAVTSTTHKTLRGPRGGLILSNDE--------------EIGHKINSALFPGLQGGPLMHIIAAKAVAFLENLQPEYKSYIQQVISNAKALASSLQERGYDILTGGTDNHIVLVDLRKDGITGKLAANSLDRAGITCNKNAIPFDETSPFITSGIRLGTPACTTRGFKEKDFVLVGHMV 385
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA_RICRO (Serine hydroxymethyltransferase OS=Rickettsia rickettsii (strain Iowa) GN=glyA PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.181e-37 Identity = 86/192 (44.79%), Postives = 112/192 (58.33%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 628 LVA E +P Y H VT+TTHK+LRGPR G+I + KIN A+FP LQGGP H I A AVA + P +K+Y +QV +NA AL + L +GY ++TGGT+NH+VL DLR G+TG D IT NKNA+ F ++S G+R+GTPA T+RG EKDF +G + Sbjct: 208 LVATGEHQSPIPYAHAVTSTTHKTLRGPRGGLILSNDE--------------EIGHKINSALFPGLQGGPLMHIIAAKAVAFLENLQPEYKSYIQQVISNAKALASSLQERGYDILTGGTDNHIVLVDLRKDGITGKLAANSLDRAGITCNKNAIPFDETSPFITSGIRLGTPACTTRGFKEKDFVLVGHMV 385
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA_NITWN (Serine hydroxymethyltransferase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=glyA PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.181e-37 Identity = 93/207 (44.93%), Postives = 113/207 (54.59%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYG 673 LVA A+P + H+ TTTTHKSLRGPR G+I K N A+FP LQGGP H I A AVAL +A P FK YAK V NA AL L G G+ +V+GGT+NHL+L DLRP GL GN EK +T NKN + F G+R+GTPA T+RG +F+Q+G + A LT Q E G Sbjct: 219 LVAGGVHASPVPHAHVTTTTTHKSLRGPRGGLILCNDEA--------------LAKKFNSAIFPGLQGGPLMHVIAAKAVALGEALRPDFKIYAKNVVENARALAESLRGHGFDIVSGGTDNHLMLVDLRPKGLKGNVSEKALVRAGLTCNKNGIPFDPEKPFVTSGLRLGTPATTTRGFGVSEFKQVGGLI--AEVLTAIAQAEDG 409
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA2_BURPS (Serine hydroxymethyltransferase 2 OS=Burkholderia pseudomallei GN=glyA2 PE=1 SV=2) HSP 1 Score: 155.606 bits (392), Expect = 2.181e-37 Identity = 86/192 (44.79%), Postives = 110/192 (57.29%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 628 ++AA ANP E+ H+VT+TTHK+LRGPR G + + KIN AVFP LQGGP H I AVA +A T FK Y +V ANA ALG+ L G LVTGGT+NHL+L DLRP GL G +VE+ + IT NKN + F G+R+GTPA T+RG +F ++G + Sbjct: 212 VIAAGRHANPVEHAHVVTSTTHKTLRGPRGGFVLTNDE--------------EIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAGGVDLVTGGTDNHLLLVDLRPKGLKGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLI 389
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA2_BURP1 (Serine hydroxymethyltransferase 2 OS=Burkholderia pseudomallei (strain 1710b) GN=glyA2 PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.181e-37 Identity = 86/192 (44.79%), Postives = 110/192 (57.29%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 628 ++AA ANP E+ H+VT+TTHK+LRGPR G + + KIN AVFP LQGGP H I AVA +A T FK Y +V ANA ALG+ L G LVTGGT+NHL+L DLRP GL G +VE+ + IT NKN + F G+R+GTPA T+RG +F ++G + Sbjct: 212 VIAAGRHANPVEHAHVVTSTTHKTLRGPRGGFVLTNDE--------------EIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAGGVDLVTGGTDNHLLLVDLRPKGLKGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLI 389 The following BLAST results are available for this feature:
BLAST of CF834984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834984 ID=CF834984; Name=CF834984; organism=Citrus sinensis; type=EST; length=675bpback to top |