CF834984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA_ORITI (Serine hydroxymethyltransferase OS=Orientia tsutsugamushi (strain Ikeda) GN=glyA PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 2.632e-37 Identity = 81/192 (42.19%), Postives = 110/192 (57.29%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 628 LVA + ++P Y H+VT+TTHK+LRGPR G+I KIN AVFP +QGGP H I A A+A +A P +K Y QV NA L L +GY+++TGGT+NH++L DLR +TG + E L D IT NK + F +S G+R+GTPA T+RG E DF +G+++ Sbjct: 198 LVATEYHSSPIPYAHVVTSTTHKTLRGPRGGLILTNDE--------------SISKKINSAVFPGMQGGPLMHVIAAKAIAFSEALMPQYKEYINQVMLNAKVLAKLLQDRGYNILTGGTDNHMLLVDLRGKNITGQEAEYLLDAAGITCNKQVMPFDTTSPTITSGIRLGTPACTTRGFKENDFITVGKYI 375 HSP 2 Score: 22.3274 bits (46), Expect = 2.632e-37 Identity = 9/17 (52.94%), Postives = 13/17 (76.47%), Query Frame = 1 Query: 1 VADPLRALLLCDMAHIS 51 +AD + A LL D+AHI+ Sbjct: 180 IADKVGAYLLADIAHIA 196
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA_DESPS (Serine hydroxymethyltransferase OS=Desulfotalea psychrophila GN=glyA PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 2.632e-37 Identity = 86/196 (43.88%), Postives = 113/196 (57.65%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 640 LVA +PF Y +VTTTTHKSLRGPR MI + ++ I+ AVFP +QGGPH+ A+AVALK+AST +FK Y QV NA +L + L KG++LVTGGTENHL+L DL +TG + K D I +N N+V F P G+R+GT A+TSRG + + +G + R V Sbjct: 212 LVAGGVHPSPFPYADVVTTTTHKSLRGPRGAMIMCKA---------------EYAKAIDKAVFPGMQGGPHDSTTAAIAVALKEASTDSFKKYTAQVVENAASLADVLIEKGFNLVTGGTENHLMLIDLSNKNITGKQAAKALDAAGIVLNCNSVPFDKRKPFDPSGIRLGTCAITSRGFAKAEMVILGNMMDRVV 392 HSP 2 Score: 23.0978 bits (48), Expect = 2.632e-37 Identity = 9/17 (52.94%), Postives = 13/17 (76.47%), Query Frame = 1 Query: 1 VADPLRALLLCDMAHIS 51 +AD + ALL+ DMAH + Sbjct: 194 IADEVGALLMVDMAHFA 210
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA_DESAP (Serine hydroxymethyltransferase OS=Desulforudis audaxviator (strain MP104C) GN=glyA PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.633e-37 Identity = 91/205 (44.39%), Postives = 116/205 (56.59%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKE 667 L+AA +P Y +VTTTTHK+LRGPR GMI ++ I+ AVFP +QGGP H I A AVAL +A P FK Y +Q+ NA AL L +G+ LV GGT+ HL+L DLR GLTG E L D ++TVNKN V F G+RIGTPA+T+RG+ E QI E ++LTL+ +E Sbjct: 207 LIAAGLHMSPVPYADVVTTTTHKTLRGPRGGMIL---------------CPEEYAAAIDKAVFPGIQGGPLMHVIAAKAVALGEAQRPEFKTYQEQIVKNARALAQALQERGFELVAGGTDTHLILVDLRNKGLTGAVAEDLLDRVDVTVNKNMVPFDPQPPRVTSGIRIGTPAVTTRGMKEDSMVQIAE----VISLTLDHPEE 392 HSP 2 Score: 24.6386 bits (52), Expect = 2.633e-37 Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 1 Query: 1 VADPLRALLLCDMAHIS 51 +AD + ALL+ DMAHI+ Sbjct: 189 IADDVGALLMIDMAHIA 205
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA_RICM5 (Serine hydroxymethyltransferase OS=Rickettsia massiliae (strain Mtu5) GN=glyA PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.849e-37 Identity = 86/189 (45.50%), Postives = 111/189 (58.73%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIG 619 LVA E +P Y H VT+TTHK+LRGPR G+I + KIN A+FP LQGGP H I A AVA + P +K+Y +QV +NA AL + L +GY ++TGGT+NH+VL DLR G+TG D IT NKNA+ F ++S G+R+GTPA T+RG EKDF +G Sbjct: 208 LVATGEHQSPIPYAHAVTSTTHKTLRGPRGGLILSNDE--------------EIGQKINSALFPGLQGGPLMHIIAAKAVAFLENLQPEYKSYIQQVISNAKALASSLQERGYDILTGGTDNHIVLVDLRKDGITGKFAANSLDRAGITCNKNAIPFDETSPFITSGIRLGTPACTTRGFKEKDFVLVG 382
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA_RICCK (Serine hydroxymethyltransferase OS=Rickettsia canadensis (strain McKiel) GN=glyA PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.849e-37 Identity = 85/192 (44.27%), Postives = 111/192 (57.81%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 628 LVA E +P + HIVT+TTHK+LRGPR G+I + KIN A+FP LQGGP H I A AVA ++A P +K+Y +QV +NA AL L +GY ++TGGT+NH+VL DLR G+TG D IT NKN + F +S G+R+GTPA T+RG EKDF + + Sbjct: 208 LVATGEHQSPLAFAHIVTSTTHKTLRGPRGGLILSNDE--------------EIGKKINSALFPGLQGGPLMHVIAAKAVAFQEALQPKYKSYIQQVISNAEALARILQERGYDILTGGTDNHIVLVDLRKDGITGKLAANSLDRAGITCNKNTIPFDKTSPFITSGIRLGTPACTTRGFKEKDFVLVAHMI 385
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA2_BURMA (Serine hydroxymethyltransferase 2 OS=Burkholderia mallei GN=glyA2 PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.849e-37 Identity = 86/192 (44.79%), Postives = 109/192 (56.77%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 628 ++AA ANP E+ H+VT+TTHK+LRGPR G + + KIN AVFP LQGGP H I AVA +A T FK Y V ANA ALG+ L G LVTGGT+NHL+L DLRP GL G +VE+ + IT NKN + F G+R+GTPA T+RG +F ++G + Sbjct: 212 VIAAGRHANPVEHAHVVTSTTHKTLRGPRGGFVLTNDE--------------EIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDHVLANAQALGDVLKAGGVDLVTGGTDNHLLLVDLRPKGLKGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLI 389
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA1_AGRT5 (Serine hydroxymethyltransferase 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=glyA1 PE=3 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 3.428e-37 Identity = 88/192 (45.83%), Postives = 105/192 (54.69%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 628 LVA + +PF +CH+ TTTTHKSLRGPR GMI D K N AVFP LQGGP H I A AVA +A P FK YA QV NA AL L G +V+GGT+NHL+L DLR TG + E IT NKN + F GVR+GTPA T+RG E +F +IG+ + Sbjct: 212 LVAGGQHPSPFPHCHVATTTTHKSLRGPRGGMILTNDE--------------DLAKKFNSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKDYAAQVVKNAKALAETLIEGGLDVVSGGTDNHLMLVDLRKKNATGKRAEAALGRAYITCNKNGIPFDPEKPFVTSGVRLGTPAGTTRGFKEAEFREIGKLI 389 HSP 2 Score: 22.7126 bits (47), Expect = 3.428e-37 Identity = 9/17 (52.94%), Postives = 13/17 (76.47%), Query Frame = 1 Query: 1 VADPLRALLLCDMAHIS 51 +AD + A L+ DMAHI+ Sbjct: 194 IADEVGAYLMVDMAHIA 210
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA2_RALEJ (Serine hydroxymethyltransferase 2 OS=Ralstonia eutropha (strain JMP134) GN=glyA2 PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 3.429e-37 Identity = 85/192 (44.27%), Postives = 108/192 (56.25%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 628 ++AA +NP +Y H+VT+TTHK+LRGPR G + + KIN AVFP LQGGP H I A AVA +A T F+ Y V ANA ALG L G LVTGGT+NHL+L DLRP GL G +VE+ + IT NKN + F G+R+G PA T+RG +F +IG + Sbjct: 212 VIAAGRHSNPVDYAHVVTSTTHKTLRGPRGGFVLTNHE--------------EIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEAMTSDFRTYIDNVLANAKALGEVLKEGGVDLVTGGTDNHLLLVDLRPKGLKGTQVEQALERAGITCNKNGIPFDTEKPTITSGIRLGAPAATTRGFGVAEFREIGRLI 389 HSP 2 Score: 22.3274 bits (46), Expect = 3.429e-37 Identity = 9/17 (52.94%), Postives = 13/17 (76.47%), Query Frame = 1 Query: 1 VADPLRALLLCDMAHIS 51 +AD + A L+ DMAHI+ Sbjct: 194 IADSVGAKLMVDMAHIA 210
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA_RICBR (Serine hydroxymethyltransferase OS=Rickettsia bellii (strain RML369-C) GN=glyA PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.429e-37 Identity = 87/192 (45.31%), Postives = 112/192 (58.33%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 628 LVAA E +P + HIVT+TT+K+LRGPR G+I + KIN A+FP LQGGP H I A AVA ++ P +K+Y KQV NA AL L +GY ++TGGT+NH+VL DLR G+TG D IT NKNA+ F +S G+R+GTPA T+RG EKDF +G + Sbjct: 208 LVAAGEHQSPIPHAHIVTSTTNKTLRGPRGGLILSNDE--------------EIGKKINSALFPGLQGGPLMHIIAAKAVAFLESLQPEYKSYIKQVIINAKALAGSLQERGYDILTGGTDNHIVLVDLRKDGITGKIAANSLDRAGITCNKNAIPFDKTSPFITSGIRLGTPACTTRGFKEKDFVLVGHLI 385 HSP 2 Score: 21.557 bits (44), Expect = 3.429e-37 Identity = 8/17 (47.06%), Postives = 13/17 (76.47%), Query Frame = 1 Query: 1 VADPLRALLLCDMAHIS 51 +AD + A L+ D+AHI+ Sbjct: 190 IADKVGAYLMADIAHIA 206
BLAST of CF834984 vs. ExPASy Swiss-Prot
Match: GLYA_RICB8 (Serine hydroxymethyltransferase OS=Rickettsia bellii (strain OSU 85-389) GN=glyA PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.429e-37 Identity = 87/192 (45.31%), Postives = 112/192 (58.33%), Query Frame = 2 Query: 56 LVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 628 LVAA E +P + HIVT+TT+K+LRGPR G+I + KIN A+FP LQGGP H I A AVA ++ P +K+Y KQV NA AL L +GY ++TGGT+NH+VL DLR G+TG D IT NKNA+ F +S G+R+GTPA T+RG EKDF +G + Sbjct: 208 LVAAGEHQSPIPHAHIVTSTTNKTLRGPRGGLILSNDE--------------EIGKKINSALFPGLQGGPLMHIIAAKAVAFLESLQPEYKSYIKQVIINAKALAGSLQERGYDILTGGTDNHIVLVDLRKDGITGKIAANSLDRAGITCNKNAIPFDKTSPFITSGIRLGTPACTTRGFKEKDFVLVGHLI 385 HSP 2 Score: 21.557 bits (44), Expect = 3.429e-37 Identity = 8/17 (47.06%), Postives = 13/17 (76.47%), Query Frame = 1 Query: 1 VADPLRALLLCDMAHIS 51 +AD + A L+ D+AHI+ Sbjct: 190 IADKVGAYLMADIAHIA 206 The following BLAST results are available for this feature:
BLAST of CF834984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834984 ID=CF834984; Name=CF834984; organism=Citrus sinensis; type=EST; length=675bpback to top |