CF834994

Overview
NameCF834994
Unique NameCF834994
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: CP2B4_RABIT (Cytochrome P450 2B4 OS=Oryctolagus cuniculus GN=CYP2B4 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.794e-11
Identity = 47/154 (30.52%), Postives = 68/154 (44.16%), Query Frame = -2
Query:  263 EELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQPVDMSESP 724
            +E++Q +G  R     D   + Y  A+I E  RL    P   P    +D    GY +P  T +         DPR +E P+ F P  FL  +GA      R + F  +PF  G+R C G   A   L L    +L  F +A+P+  P D+  +P
Sbjct:  326 KEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK----RNEGF--MPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPV-PPEDIDLTP 472          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: CP2A4_MOUSE (Cytochrome P450 2A4 OS=Mus musculus GN=Cyp2a4 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.794e-11
Identity = 47/171 (27.49%), Postives = 71/171 (41.52%), Query Frame = -2
Query:  224 EELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQPVDMSESPGL----TIPKATPLKVL 724
            EE+D+ +G+ R     D   + Y +A+I E  R     P+   R   +D     + +P GT +      + +DP+ + NP  F P+ FL   G     D        +PF  G+R C G   A   L L L  ++  F   +    P D+  SP L    TIP    +  L
Sbjct:  329 EEIDRVIGRNRQPKYEDRMKMPYTEAVIHEIQRFADLIPMGLARRVTKDTKFRDFLLPKGTEVFPMLGSVLKDPKFFSNPKDFNPKHFLDDKGQFKKSDA------FVPFSIGKRYCFGEGLARMELFLFLTNIMQNFHFKS-TQAPQDIDVSPRLVGFVTIPPTYTMSFL 492          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: CP2A5_MOUSE (Cytochrome P450 2A5 OS=Mus musculus GN=Cyp2a5 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.343e-11
Identity = 47/171 (27.49%), Postives = 71/171 (41.52%), Query Frame = -2
Query:  224 EELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQPVDMSESPGL----TIPKATPLKVL 724
            EE+D+ +G+ R     D   + Y +A+I E  R     P+   R   +D     + +P GT +      + +DP+ + NP  F P+ FL   G     D        +PF  G+R C G   A   L L L  ++  F   +    P D+  SP L    TIP    +  L
Sbjct:  329 EEIDRVIGRNRQPKYEDRMKMPYTEAVIHEIQRFADMIPMGLARRVTKDTKFRDFLLPKGTEVFPMLGSVLKDPKFFSNPKDFNPKHFLDDKGQFKKNDA------FVPFSIGKRYCFGEGLARMELFLFLTNIMQNFHFKS-TQAPQDIDVSPRLVGFATIPPTYTMSFL 492          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: CP139_MYCTU (Putative cytochrome P450 139 OS=Mycobacterium tuberculosis GN=cyp139 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.343e-11
Identity = 44/136 (32.35%), Postives = 65/136 (47.79%), Query Frame = -2
Query:  296 GKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATP 703
            G+  A D  D   L YL  ++ ETLRLY  G +++ R  + D    G+ + AG  L+ +A+   R P +W  P+ F+P R+ P    +     +    E IPF  G   C GA  A   + + LARL+    L  P
Sbjct:  270 GRVPAAD--DLSALTYLNGVVHETLRLYSPG-VISARRVLRDLWFDGHRIRAGRLLIFSAYVTHRLPEIWPEPTEFRPLRWDPNAADYR----KPAPHEFIPFSGGLHRCIGAVMATTEMTVILARLVARAMLQLP 398          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: CP139_MYCBO (Putative cytochrome P450 139 OS=Mycobacterium bovis GN=cyp139 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.343e-11
Identity = 44/136 (32.35%), Postives = 65/136 (47.79%), Query Frame = -2
Query:  296 GKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATP 703
            G+  A D  D   L YL  ++ ETLRLY  G +++ R  + D    G+ + AG  L+ +A+   R P +W  P+ F+P R+ P    +     +    E IPF  G   C GA  A   + + LARL+    L  P
Sbjct:  270 GRVPAAD--DLSALTYLNGVVHETLRLYSPG-VISARRVLRDLWFDGHRIRAGRLLIFSAYVTHRLPEIWPEPTEFRPLRWDPNAADYR----KPAPHEFIPFSGGLHRCIGAVMATTEMTVILARLVARAMLQLP 398          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: C5133_DICDI (Probable cytochrome P450 513A3 OS=Dictyostelium discoideum GN=cyp513a3 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.343e-11
Identity = 41/123 (33.33%), Postives = 59/123 (47.97%), Query Frame = -2
Query:  296 LVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATP 664
            L Y+  IIKET R +P   L  P    ED  + GY + AGT ++ N +   R  +++++P+ F PERF              Q   LI FG G R C G S A   +   +A LL+ ++   P
Sbjct:  351 LPYISMIIKETFRKHPIALLGLPHVTTEDVEIDGYKIEAGTYIIQNIFSSHRSDKIFQSPNEFIPERFFES----------SQNQGLIHFGLGVRDCVGKSLAECEIFTLIATLLNRYQFINP 463          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: CP4E5_DROMT (Cytochrome P450 4e5, mitochondrial OS=Drosophila mettleri GN=Cyp4e5 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.059e-11
Identity = 49/153 (32.03%), Postives = 72/153 (47.06%), Query Frame = -2
Query:  281 EELDQQVGKERAVDES--DTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERF---LPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQPV 724
            EE    +G E   D +  +   + YL   IKE  R+YP+ P +  R   +D  + G  +P GT L +    +  D RV+E P  F PERF    PG             FE +PF +G R+C G   AL  L   +++L+  FE+   +D+ V
Sbjct:  335 EEQQAVMGNELNRDATFQEISAMKYLDLFIKEAQRVYPSVPFIG-RYTDKDYNIHGTIMPKGTTLNLGIIVLGYDDRVFEEPHRFYPERFEKQKPG------------PFEYVPFSAGPRNCIGQKFALLELKTVISKLVRTFEVLPAVDELV 474          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: CP4AC_RAT (Cytochrome P450 4A12 OS=Rattus norvegicus GN=Cyp4a12 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 3.059e-11
Identity = 39/140 (27.86%), Postives = 62/140 (44.29%), Query Frame = -2
Query:  305 EELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFEL 724
            +E+   +G   ++   D   + Y    IKE LR+YP    ++   +       G  +P G  +M++ + +  +P VW NP  F P RF P    H+           +PF  G R+C G   A+  L + +A  L  FEL
Sbjct:  347 KEIQSLLGDGASITWDDLDKMPYTTMCIKEALRIYPPVTAVSRMLSTPVTFPDGRSLPKGITVMLSFYGLHHNPTVWPNPEVFDPYRFAPESSRHS--------HSFLPFSGGARNCIGKQFAMNELKVAVALTLLRFEL 478          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: CP4A6_RABIT (Cytochrome P450 4A6 OS=Oryctolagus cuniculus GN=CYP4A6 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.059e-11
Identity = 40/140 (28.57%), Postives = 62/140 (44.29%), Query Frame = -2
Query:  305 EELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFEL 724
            EE+   +G   ++       + Y    IKE LRLYP  P +  + +       G  +P G  + ++ + +  +P+VW NP  F P  F PG   H+           +PF  G R+C G   A+  L + +A  L  FEL
Sbjct:  349 EEIQGLLGDGASITWEHLDQMPYTTMCIKEALRLYPPVPGVGRQLSSPVTFPDGRSLPKGVIVTLSIYALHHNPKVWPNPEVFDPFPFAPGSARHSHA--------FLPFSGGPRNCIGKQFAMNELKVAVALTLVRFEL 480          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: CP2E1_MACFA (Cytochrome P450 2E1 (Fragment) OS=Macaca fascicularis GN=CYP2E1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.059e-11
Identity = 46/154 (29.87%), Postives = 67/154 (43.51%), Query Frame = -2
Query:  263 EELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQPVDMSESP 724
            EE+D+ +G  R     D Q + Y+ A++ E  R     P   P EA  D    GY +P GT ++     +    + + +P  F+PE  +   G     D         PF +G+R C G   A   L L L+ +L  F L  PL  P D+  SP
Sbjct:  283 EEIDRVIGPSRIPAIKDRQEMPYMHAVVHEIQRFITLVPSNLPHEATRDTIFRGYIIPKGTVIVPTLDSVLYHNQEFPDPEKFKPEHLVDESGKFKYSDY------FKPFSAGKRVCAGEGLARMELFLLLSAILQHFNL-KPLVDPKDIDISP 429          
The following BLAST results are available for this feature:
BLAST of CF834994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 488
Match NameE-valueIdentityDescription
CP2B4_RABIT1.794e-1130.52Cytochrome P450 2B4 OS=Oryctolagus cuniculus GN=CY... [more]
CP2A4_MOUSE1.794e-1127.49Cytochrome P450 2A4 OS=Mus musculus GN=Cyp2a4 PE=2... [more]
CP2A5_MOUSE2.343e-1127.49Cytochrome P450 2A5 OS=Mus musculus GN=Cyp2a5 PE=2... [more]
CP139_MYCTU2.343e-1132.35Putative cytochrome P450 139 OS=Mycobacterium tube... [more]
CP139_MYCBO2.343e-1132.35Putative cytochrome P450 139 OS=Mycobacterium bovi... [more]
C5133_DICDI2.343e-1133.33Probable cytochrome P450 513A3 OS=Dictyostelium di... [more]
CP4E5_DROMT3.059e-1132.03Cytochrome P450 4e5, mitochondrial OS=Drosophila m... [more]
CP4AC_RAT3.059e-1127.86Cytochrome P450 4A12 OS=Rattus norvegicus GN=Cyp4a... [more]
CP4A6_RABIT3.059e-1128.57Cytochrome P450 4A6 OS=Oryctolagus cuniculus GN=CY... [more]
CP2E1_MACFA3.059e-1129.87Cytochrome P450 2E1 (Fragment) OS=Macaca fascicula... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06H22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06H22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834994 ID=CF834994; Name=CF834994; organism=Citrus sinensis; type=EST; length=725bp
TTTTTTTTTTGAGGAAGAAAAAACTTAATTCATGCAAGCAAAGATCGCCC
ACCACTGCAGCAGTAATTTGTAGTAAGTGCATAACATTAAGAAATTAATT
TAACCAACACTACAGCTCGCTTTATTTAGTAAACAATAAGCACTTCGAGC
TTTGCTTGCTGGATTTAATAATTGCTCAAACTCAAAAGCCATAGGGGTTG
GCAGGGAGGAGGCGAGGAGAAAGGAGAACCTTCAATGGGGTGGCCTTAGG
TATGGTTAAGCCAGGAGACTCTGACATGTCAACAGGCTGATCCAATGGGG
TTGCTAGTTCAAATGCATGAAGGAGTCGAGCAAGCGTGAGGTGAAGGACC
TGGAGAGCAGATGATGCACCTGGGCAAGAACGTCGGCCAGAGCCAAAAGG
AATGAGTTCAAATTGTTGGCCCCTAACATCAACATCTGCATGGGCGCCAT
GGCCTGGGAGAAATCTCTCTGGTTGGAAGGCTGATGGATTTTCCCAAACC
CTTGGATCCCTTTGAATTTTCCAAGCATTTATCATCAAGCGGGTGCCAGC
CGGGACATGGTACCCAGAGACAGTGCAATCTTCCATTGCTTCACGTGGTG
CTAAGAGAGGACCCGCGGGATACAAGCGGAGGGTCTCTTTGATAATCGCT
TGGAGATACACTAGGTTTTGGGTGTCCGACTCATCAACTGCTCGTTCCTT
ACCAACTTGTTGGTCCAATTCTTCG
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