CF834994

Overview
NameCF834994
Unique NameCF834994
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10149 contig Csv1_Contig10149:905..1629. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.540e-31
Identity = 69/159 (43.40%), Postives = 92/159 (57.86%), Query Frame = -2
Query:  251 GKERAVD---ESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQ-----PVDMSESPGLTI 703
            G E+ +D   E D  +L YL+A +KE LRL+P GPLL P  +  DC + GYH+PA  R+++N W I RDP VWE P  F PERF+   G        GQ F  +PFGSGRR CPGA+  L  + + LA L++ F+   P ++      V M E  GL +
Sbjct:  364 GAEKKLDMIREDDLSSLPYLKASMKEALRLHPPGPLLLPHYSTADCQIDGYHIPANPRVLVNGWAIGRDPAVWEKPEEFMPERFM-RDGWDKSNSYSGQDFRYLPFGSGRRICPGANFGLATMEIMLANLMYHFDWEVPNEKEDGCWKVSMDEKFGLML 521          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.744e-31
Identity = 71/168 (42.26%), Postives = 95/168 (56.55%), Query Frame = -2
Query:  215 GKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHA--DVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATP---LDQPVDMSESPGLTIPKATPLKVLLSP 703
            GK     E     L Y + ++KE LRL+P  PLL PR   E C V G+ V  GT++++NAW + R P  W +P  F+PERF    G+ A   VD RG QFE IPFGSGRR CPG +  L  L L +ARLL+ F+ + P     + +DM    G T+ +   L ++ SP
Sbjct:  342 GKSPEDHEGQMDKLSYTRMVVKEGLRLHPVLPLLLPRSCQETCDVGGFEVTKGTKVIVNAWALARSPERWHDPEEFRPERFADDDGSSAAVAVDYRGSQFEYIPFGSGRRMCPGNTFGLAALELMVARLLYYFDWSLPDGMRPEELDMDTVVGSTMRRRNHLHLVPSP 509          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.744e-31
Identity = 64/160 (40.00%), Postives = 99/160 (61.88%), Query Frame = -2
Query:  215 DESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPL---DQPVDMSESPGLTIPKATPLKVLLSP 685
            DE+D + L YL+ +IKET+RL+   PLL PRE  E+  ++GY +P  T++M+N W + RDP+ W++  +F+PERF         +D  G  FE +PFG GRR CPG S  L  ++L LA+LL+ F+   P     + +D++ES G+T  +   L ++ +P
Sbjct:  343 DENDVEELKYLKLVIKETMRLHAPVPLLVPRECREETEINGYTIPVKTKVMVNVWALGRDPKYWDDAESFKPERF-----EQCSIDFIGNNFEYLPFGGGRRICPGISFGLANVYLPLAQLLYHFDWKLPTGMEPKDLDLTESAGITAARKGDLYLIATP 497          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: C71BZ_ARATH (Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=CYP71B38 PE=2 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 7.744e-31
Identity = 69/172 (40.12%), Postives = 102/172 (59.30%), Query Frame = -2
Query:  224 EELDQQVG--KERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATP---LDQPVDMSESPGLTIPKATPLKVL 724
            EE+   +G  KER + E D + + YL+ ++ ET RL+P  PLL PR  M D  + GY++P  T + IN + I RDP+ W+ P  F PERFL      + +D +GQ FEL+PFG+GRR CPG ++ + ++ L L  LL+ F+ + P     + +DM E  G  I K  PL ++
Sbjct:  329 EEIRAMLGPNKER-ITEEDLEKVEYLKLVMVETFRLHPPAPLLLPRLTMSDIKIQGYNIPKNTMIQINTYAIGRDPKYWKQPGEFIPERFL-----DSPIDYKGQHFELLPFGAGRRICPGMATGITMVELGLLNLLYFFDWSLPNGMTIEDIDMEEDEGFAIAKKVPLVLI 494          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: C71BX_ARATH (Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=CYP71B36 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.744e-31
Identity = 65/166 (39.16%), Postives = 95/166 (57.23%), Query Frame = -2
Query:  233 ELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLD---QPVDMSESPGLTIPKATPL 721
            E+  Q+GK+  +   D   L YL+ +I ET RL+P  P L PR+ M +  ++ Y +P  TRL +N W I RDP  W++P  F PERF+     ++ +D +GQ FEL+PFGSGRR CP       ++   LA +L+ F+   P+    + +D+ ESPGL   K   L
Sbjct:  330 EIRNQIGKKSMITLDDIDQLHYLKMVINETWRLHPPSPFLIPRQVMSEFELNDYVIPVKTRLYVNVWAIGRDPDTWKDPEEFLPERFV-----NSSIDAKGQHFELLPFGSGRRMCPAMYMGTTMVEFGLANMLYHFDWKIPVGMVAEDIDLEESPGLNASKKNEL 490          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.011e-30
Identity = 69/155 (44.52%), Postives = 92/155 (59.35%), Query Frame = -2
Query:  260 ELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQ-PVDMSESPG 721
            ELD  +G    + E DT  L YL A++KETLRL  A PLL P   + D  + G+ +PA +++++NAW +  +P  W+NP  F+PERFL      A V+  G  F  +PFG GRRSCPG   AL +L +TL RL+  FEL  P  Q  +D SE  G
Sbjct:  335 ELDTLLGPGHQITEPDTYKLPYLNAVVKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPAHWKNPEEFRPERFLE---EEAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKIDTSEKGG 486          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: TCMO_HELTU (Trans-cinnamate 4-monooxygenase OS=Helianthus tuberosus GN=CYP73A1 PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.011e-30
Identity = 68/155 (43.87%), Postives = 93/155 (60.00%), Query Frame = -2
Query:  260 ELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQ-PVDMSESPG 721
            ELD ++G    + E D QNL YLQA++KETLRL  A PLL P   + D  + G+ +PA +++++NAW +  +P  W+ P  F+PERFL      A V+  G  F  +PFG GRRSCPG   AL +L +T+ RL+  FEL  P  Q  +D  E  G
Sbjct:  335 ELDTKLGPGVQITEPDVQNLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPDQWKKPEEFRPERFLE---EEAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQSKIDTDEKGG 486          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: C71D9_SOYBN (Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.011e-30
Identity = 65/169 (38.46%), Postives = 102/169 (60.36%), Query Frame = -2
Query:  224 ELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATP---LDQPVDMSESPGLTIPKATPLKVL 721
            E+ +   KE   + S T+NL YL++++ ETLRL+P  PLL PRE  + C ++GYH+PA +R+++NAW I RDPR+W     F PERF+        ++ +   FE IPFG+GRR CPG +  L  +   LA L++ F+   P    ++ + M+E  G+T+ +   L ++
Sbjct:  327 EVRRVFDKEGRPNGSGTENLKYLKSVVSETLRLHPPAPLLLPRECGQACEINGYHIPAKSRVIVNAWAIGRDPRLWTEAERFYPERFI-----ERSIEYKSNSFEFIPFGAGRRMCPGLTFGLSNVEYVLAMLMYHFDWKLPKGTKNEDLGMTEIFGITVARKDDLYLI 490          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: TCMO_GLYEC (Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.321e-30
Identity = 69/156 (44.23%), Postives = 94/156 (60.26%), Query Frame = -2
Query:  260 EELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQ-PVDMSESPG 724
            +E+D+ +G    V E D Q L YLQA+IKETLRL  A PLL P   + D  + GY +PA +++++NAW +  +P  W+ P  F+PERFL      + V+  G  F  +PFG GRRSCPG   AL +L +TL RL+  FEL  P  Q  +D +E  G
Sbjct:  334 DEIDRVLGPGHQVTEPDMQKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPANWKRPEEFRPERFLE---EESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKLDTAEKGG 486          
BLAST of CF834994 vs. ExPASy Swiss-Prot
Match: C71B7_ARATH (Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CYP71B7 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.321e-30
Identity = 63/162 (38.89%), Postives = 97/162 (59.88%), Query Frame = -2
Query:  224 KERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLD---QPVDMSESPGLTIPKATPLKVL 700
            K++ + E D   + Y + ++KE  RL+PA PLL PRE M    + GY +P  T++MIN + I RDP++W NP  F P+RFL      + +D RG  FEL+PFGSGRR CPG +  +  + L L  LL+ F+   P+    + +++ E+  + I K T L+++
Sbjct:  343 KKQRITEQDLSQVHYFKLVVKEIFRLHPAAPLLLPRETMSHVKIQGYDIPVKTQMMINIYSIARDPKLWTNPDEFNPDRFL-----DSSIDYRGLNFELLPFGSGRRICPGMTLGITTVELGLLNLLYFFDWVVPVGKNVKDINLEETGSIIISKKTTLELV 499          
The following BLAST results are available for this feature:
BLAST of CF834994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 488
Match NameE-valueIdentityDescription
C71C3_MAIZE4.540e-3143.40Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]
C99A1_SORBI7.744e-3142.26Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]
C71D7_SOLCH7.744e-3140.00Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
C71BZ_ARATH7.744e-3140.12Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=C... [more]
C71BX_ARATH7.744e-3139.16Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=C... [more]
TCMO_POPTM1.011e-3044.52Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]
TCMO_HELTU1.011e-3043.87Trans-cinnamate 4-monooxygenase OS=Helianthus tube... [more]
C71D9_SOYBN1.011e-3038.46Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=... [more]
TCMO_GLYEC1.321e-3044.23Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza ech... [more]
C71B7_ARATH1.321e-3038.89Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CY... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_06H22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06H22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834994 ID=CF834994; Name=CF834994; organism=Citrus sinensis; type=EST; length=725bp
TTTTTTTTTTGAGGAAGAAAAAACTTAATTCATGCAAGCAAAGATCGCCC
ACCACTGCAGCAGTAATTTGTAGTAAGTGCATAACATTAAGAAATTAATT
TAACCAACACTACAGCTCGCTTTATTTAGTAAACAATAAGCACTTCGAGC
TTTGCTTGCTGGATTTAATAATTGCTCAAACTCAAAAGCCATAGGGGTTG
GCAGGGAGGAGGCGAGGAGAAAGGAGAACCTTCAATGGGGTGGCCTTAGG
TATGGTTAAGCCAGGAGACTCTGACATGTCAACAGGCTGATCCAATGGGG
TTGCTAGTTCAAATGCATGAAGGAGTCGAGCAAGCGTGAGGTGAAGGACC
TGGAGAGCAGATGATGCACCTGGGCAAGAACGTCGGCCAGAGCCAAAAGG
AATGAGTTCAAATTGTTGGCCCCTAACATCAACATCTGCATGGGCGCCAT
GGCCTGGGAGAAATCTCTCTGGTTGGAAGGCTGATGGATTTTCCCAAACC
CTTGGATCCCTTTGAATTTTCCAAGCATTTATCATCAAGCGGGTGCCAGC
CGGGACATGGTACCCAGAGACAGTGCAATCTTCCATTGCTTCACGTGGTG
CTAAGAGAGGACCCGCGGGATACAAGCGGAGGGTCTCTTTGATAATCGCT
TGGAGATACACTAGGTTTTGGGTGTCCGACTCATCAACTGCTCGTTCCTT
ACCAACTTGTTGGTCCAATTCTTCG
back to top