CF834995

Overview
NameCF834995
Unique NameCF834995
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length727
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10149 contig Csv1_Contig10149:747..1473. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834995 vs. ExPASy Swiss-Prot
Match: CP2CL_CANFA (Cytochrome P450 2C21 (Fragment) OS=Canis familiaris GN=CYP2C21 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 8.115e-12
Identity = 48/180 (26.67%), Postives = 76/180 (42.22%), Query Frame = 1
Query:  109 WAISLLLNNRHALKRAHEELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQPVDMSESPGLTIPKATP 648
            + + +LL +     +  EE+ + VG+ R+    D   + Y  A++ E  R     P   P    +D     Y +P GT ++ +   +  D + + NP  F P  FL  +G+    D        + F +G+R C G   A   L L L  +L  F L  PL  P D+  +P      ATP
Sbjct:  305 YGLLVLLKHPDVTAKVQEEIHRVVGRHRSPCMQDRSCMPYTDAVVHEIQRYIDLVPNNLPHSVTQDIKFREYLIPKGTTILTSLTSVLHDEKGFPNPDQFDPGHFLDENGSFKKSDY------FMAFSAGKRVCVGEGLARMELFLLLTNILQHFTL-KPLVDPKDIDTTPIANGLGATP 477          
BLAST of CF834995 vs. ExPASy Swiss-Prot
Match: CP2CK_MACFA (Cytochrome P450 2C20 OS=Macaca fascicularis GN=CYP2C20 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.115e-12
Identity = 44/162 (27.16%), Postives = 67/162 (41.36%), Query Frame = 1
Query:  109 WAISLLLNNRHALKRAHEELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLD 594
            + + LLL +     +  EE+D  +G+ R+    D  ++ Y  A+I E  R     P   P     D     Y +P GT ++     +  D + + NP  F P  FL  +G     D        +PF +G+R C G   A   L L L  +L  F L +  D
Sbjct:  308 YGLLLLLKHPEVTAKVQEEIDHVIGRHRSPCMQDRSHMPYTDAVIHEIQRYIDLVPTGVPHAVTTDIKFRNYLIPKGTIIITLLTSVLHDDKEFPNPKIFDPGHFLDENGNFKKSDY------FMPFSAGKRICAGEGLARMELFLFLTTILQNFNLKSVAD 463          
BLAST of CF834995 vs. ExPASy Swiss-Prot
Match: CP27A_RABIT (Sterol 26-hydroxylase, mitochondrial OS=Oryctolagus cuniculus GN=CYP27A1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.115e-12
Identity = 46/157 (29.30%), Postives = 70/157 (44.59%), Query Frame = 1
Query:  109 WAISLLLNNRHALKRAHEELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFEL 579
            WA+  L  N        +E+   V   +     D  ++  L+A++KETLRLYP  P  +     ++  V G+  P  T+ +   +   RDP  +  P  F P R+L       +       F  +PFG G R+C G   A   + L LARL+  +EL
Sbjct:  349 WALYHLSKNPEIQAALRKEVVGVVAAGQVPQHKDFAHMPLLKAVLKETLRLYPVIPANSRIIVDKEIEVGGFLFPKNTQFVFCHYVTSRDPSTFSEPDTFWPYRWL--RKGQPETSKTQHPFGSVPFGYGVRACLGRRIAELEMQLLLARLIQRYEL 503          
BLAST of CF834995 vs. ExPASy Swiss-Prot
Match: C6A21_DROME (Probable cytochrome P450 6a21 OS=Drosophila melanogaster GN=Cyp6a21 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.115e-12
Identity = 48/162 (29.63%), Postives = 77/162 (47.53%), Query Frame = 1
Query:  109 WAISLLLNNRHALKRAHEELDQQVGK-ERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSG---YHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELA 582
            +A+  L  N+    R  +E  + + K    ++    ++LVYL  ++ ETLRLY   P+L  RE +ED  V G   Y +  G  ++I    + RD +++ NP+ F P+ F P      D        E +PFG G R+C G         + LA L+  F+ +
Sbjct:  319 FALYELAQNQDIQNRVRKECQEVIEKCNGELNYESMKDLVYLDQVVSETLRLYTVLPVLN-RECLEDYEVPGHPKYVIKKGMPVLIPCGAMHRDEKLYANPNTFNPDNFSPERVKERD------SVEWLPFGDGPRNCIGMRFGQMQARIGLALLIKDFKFS 473          
BLAST of CF834995 vs. ExPASy Swiss-Prot
Match: CP4E3_DROME (Cytochrome P450 4e3 OS=Drosophila melanogaster GN=Cyp4e3 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.060e-11
Identity = 47/168 (27.98%), Postives = 87/168 (51.79%), Query Frame = 1
Query:  112 AISLLLNNRH--ALKRAHEELDQQVGKE--RAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQPV 603
            + S+ L +RH    ++ + E  + +G +  R+V   +   + YL   IKE  R+YP+ P +  R   +D  ++G  VP GT L +    +  + R++++P  F+PERF          + +   FE +PF +G R+C G   AL  L   +++++ +FE+   +D+ V
Sbjct:  317 SFSVYLLSRHPDVQRKLYREQCEVMGHDMNRSVSFQEIAKMKYLDLFIKEAQRVYPSVPFIG-RYCDKDYDINGSIVPKGTTLNLALILLGYNDRIFKDPHHFRPERF---------EEEKPAPFEYLPFSAGPRNCIGQKFALLELKTVISKVVRSFEVLPAVDELV 474          
BLAST of CF834995 vs. ExPASy Swiss-Prot
Match: CP2CS_MESAU (Cytochrome P450 2C28 OS=Mesocricetus auratus GN=CYP2C28 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.060e-11
Identity = 43/162 (26.54%), Postives = 71/162 (43.83%), Query Frame = 1
Query:  109 WAISLLLNNRHALKRAHEELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLD 594
            + + LLL ++    +  +E+D  +G++R+    D   + Y  A++ E  R     P   P  A  +     Y +P GT L+ +   +  D + + NP  F P  FL  +G     D        +PF  G+R C G + A   L L L  +L  F+L +  D
Sbjct:  308 YGLLLLLKHKEVTAKVQKEIDHVIGRDRSPCMQDRTRMPYTDAMVHEVQRYVNLIPNNVPHAATCNVKFRNYVIPKGTDLITSLTSVLHDDKEFPNPKIFDPAHFLDENGNFKKSDY------FMPFSIGKRMCMGEALARMELFLLLTTILQNFDLKSLAD 463          
BLAST of CF834995 vs. ExPASy Swiss-Prot
Match: C5174_DICDI (Probable cytochrome P450 517A4 OS=Dictyostelium discoideum GN=cyp517a4 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.060e-11
Identity = 49/186 (26.34%), Postives = 81/186 (43.55%), Query Frame = 1
Query:   49 NPTCLALIXXXXXXXXXXXXWAISLLLNNRHALKRAHEELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQPVD 606
            N  C  +             W I  L N     + A++E+ + V  +  V+ +  QN  Y+ A IKET+RL   G  L PR A  D     + +P    + IN  +I ++  +++N   F P R+L                  I FG G+R+CPG   A+  + L ++ LL  ++L +   + +D
Sbjct:  287 NQICFDIFGPAVGTVTITMNWVILQLCNRPELQEIAYQEIKKAVKDDEYVNLNHKQNAPYIVAFIKETMRLCSNGFGL-PRTAKNDQICGDFFIPKDAIIFINYLEISQNEEIFKNAKEFNPTRYLD----------ESLPVPNIHFGVGQRACPGRFVAIDKMFLGISNLLLKYKLKSQNGEKID 461          
BLAST of CF834995 vs. ExPASy Swiss-Prot
Match: CP4B1_MOUSE (Cytochrome P450 4B1 OS=Mus musculus GN=Cyp4b1 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.384e-11
Identity = 48/177 (27.12%), Postives = 80/177 (45.20%), Query Frame = 1
Query:  148 KRAHEELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGH--GAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELA-TPLDQPVDMSESPGLTIPKATPLKVLLSP 669
            +R  EE+ + +G   +    D   + YL   +KE  RLYP  P +  + +     V G  +PAG+ + ++ + + R+  VW +P  F P RF P +  G H         F  +PF +G R+C G   A+  + +  A  L  FE +  P   P+ +   P L +     + + L P
Sbjct:  339 QRCREEVREILGDRDSFQWDDLAQMTYLTMCMKECFRLYPPVPQVYRQLSKPVTFVDGRSLPAGSLISLHIYALHRNSAVWPDPEVFDPLRFSPENMTGRH--------PFAFMPFSAGPRNCIGQQFAMNEMKVVTALCLLRFEFSPDPSKIPIKV---PQLILRSKNGIHLYLKP 504          
BLAST of CF834995 vs. ExPASy Swiss-Prot
Match: CP2W1_HUMAN (Cytochrome P450 2W1 OS=Homo sapiens GN=CYP2W1 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.384e-11
Identity = 50/160 (31.25%), Postives = 70/160 (43.75%), Query Frame = 1
Query:  109 WAISLLLNNRHALKRAHEELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATP 588
            WA  L+  +     R  EELD+ +G  R     D Q L Y  A++ E  R     P + PR    D  + G+ +P GT ++     +  D   W+ P  F P  FL  +G      V+ + F  +PF +GRR C G   A   L L  A LL  + L  P
Sbjct:  307 WAALLMGRHPDVQGRVQEELDRVLGPGRTPRLEDQQALPYTSAVLHEVQRFITLLPHV-PRCTAADTQLGGFLLPKGTPVIPLLTSVLLDETQWQTPGQFNPGHFLDANGHF----VKREAF--LPFSAGRRVCVGERLARTELFLLFAGLLQRYRLLPP 459          
BLAST of CF834995 vs. ExPASy Swiss-Prot
Match: CP2E1_CANFA (Cytochrome P450 2E1 OS=Canis familiaris GN=CYP2E1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.384e-11
Identity = 47/171 (27.49%), Postives = 77/171 (45.03%), Query Frame = 1
Query:  109 WAISLLLNNRHALKRAHEELDQQVGKERAVDESDTQNLVYLQAIIKETLRLYPAGPLLAPREAMEDCTVSGYHVPAGTRLMINAWKIQRDPRVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHAFELATPLDQPVDMSESP 621
            + + +L+      ++ HEE+D+ +G  R     D   + Y+ A++ E  R     P   P  A +D    GY +P GT ++     +  D + + +P  F+PE FL  +G     D          F +G+R C G   A   L L L+ +L  F L + +D P D+  SP
Sbjct:  310 YGLLILMKYPEVEEKLHEEIDRVIGPSRVPAIKDRLEMPYMDAVVHEIQRFIDLLPSNLPHVANQDTMFRGYVIPKGTVVIPTLDSVLFDKQEFPDPEKFKPEHFLNENGKFKYSDY------FKAFSAGKRVCVGEGLARMELFLFLSAILQHFNLKSLVD-PKDIDLSP 473          
The following BLAST results are available for this feature:
BLAST of CF834995 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CP2CL_CANFA8.115e-1226.67Cytochrome P450 2C21 (Fragment) OS=Canis familiari... [more]
CP2CK_MACFA8.115e-1227.16Cytochrome P450 2C20 OS=Macaca fascicularis GN=CYP... [more]
CP27A_RABIT8.115e-1229.30Sterol 26-hydroxylase, mitochondrial OS=Oryctolagu... [more]
C6A21_DROME8.115e-1229.63Probable cytochrome P450 6a21 OS=Drosophila melano... [more]
CP4E3_DROME1.060e-1127.98Cytochrome P450 4e3 OS=Drosophila melanogaster GN=... [more]
CP2CS_MESAU1.060e-1126.54Cytochrome P450 2C28 OS=Mesocricetus auratus GN=CY... [more]
C5174_DICDI1.060e-1126.34Probable cytochrome P450 517A4 OS=Dictyostelium di... [more]
CP4B1_MOUSE1.384e-1127.12Cytochrome P450 4B1 OS=Mus musculus GN=Cyp4b1 PE=1... [more]
CP2W1_HUMAN1.384e-1131.25Cytochrome P450 2W1 OS=Homo sapiens GN=CYP2W1 PE=2... [more]
CP2E1_CANFA1.384e-1127.49Cytochrome P450 2E1 OS=Canis familiaris GN=CYP2E1 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06H22_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06H22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834995 ID=CF834995; Name=CF834995; organism=Citrus sinensis; type=EST; length=727bp
CGATATCGGACCCTAAAATTTCCTGGTCGTGATGCTGATACCATCAACAA
CCCTACATGCTTGGCACTCATCCTTGGTGGCAGTGATACTACATCAGGCA
CCCTGACATGGGCCATTTCTTTACTCTTGAACAACCGCCATGCGTTGAAG
AGGGCACACGAAGAATTGGACCAACAAGTTGGTAAGGAACGAGCAGTTGA
TGAGTCGGACACCCAAAACCTAGTGTATCTCCAAGCGATTATCAAAGAGA
CCCTCCGCTTGTATCCCGCGGGTCCTCTCTTAGCACCACGTGAAGCAATG
GAAGATTGCACTGTCTCTGGGTACCATGTCCCGGCTGGCACCCGCTTGAT
GATAAATGCTTGGAAAATTCAAAGGGATCCAAGGGTTTGGGAAAATCCAT
CAGCCTTCCAACCAGAGAGATTTCTCCCAGGCCATGGCGCCCATGCAGAT
GTTGATGTTAGGGGCCAACAATTTGAACTCATTCCTTTTGGCTCTGGCCG
ACGTTCTTGCCCAGGTGCATCATCTGCTCTCCAGGTCCTTCACCTCACGC
TTGCTCGACTCCTTCATGCATTTGAACTAGCAACCCCATTGGATCAGCCT
GTTGACATGTCAGAGTCTCCTGGCTTAACCATACCTAAGGCCACCCCATT
GAAGGTTCTCCTTTCTCCTCGCCTCCTCCCTGCCAACCCCTATGGCTTTT
GAGTTTGAGCAATTATTAAATCCAGCA
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