CF835011

Overview
NameCF835011
Unique NameCF835011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 9.277e-33
Identity = 71/168 (42.26%), Postives = 103/168 (61.31%), Query Frame = -2
Query:  272 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAE 775
            YL +    KI+HRD+KA N+LLD++    + DFGLAKL +   TH++T + GT G++APEY   G  ++K DV+ +GI+ LE++ G R+  + R  N +   L+DWV           LVDP L + Y   E   +IQ+A++CT   P +RP MSEVV+MLEG  + E
Sbjct:  737 YLHEESRLKIVHRDIKATNVLLDKQLNPKISDFGLAKLDEEDSTHISTRIAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVHG-RSNKIERSKN-NTFYLIDWVEVLREKNNLLELVDPRLGSEYNREEAMTMIQIAIMCTSSEPCERPSMSEVVKMLEGKKMVE 902          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.067e-32
Identity = 70/163 (42.94%), Postives = 102/163 (62.58%), Query Frame = -2
Query:  287 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 775
            YL +    KI+HRD+KA N+LLD    A + DFGLAKL D ++TH++T + GTIG++APEY   G  ++K DV+ +G++ LE+++G+   +      ++ V LLDW            LVDPDL  ++ + E  +++ +ALLCT  SP  RP MS VV MLEG
Sbjct:  782 YLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLNDDENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYR--PKEEFVYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSMLEG 942          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.750e-31
Identity = 67/163 (41.10%), Postives = 102/163 (62.58%), Query Frame = -2
Query:  287 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 775
            YL +    KI+HRD+KA N+LLD    A + DFGLAKL + ++TH++T + GTIG++APEY   G  ++K DV+ +G++ LE+++G+   +      ++ + LLDW            LVDPDL  ++ + E  +++ +ALLCT  SP  RP MS VV ML+G
Sbjct:  780 YLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYR--PKEEFIYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSMLQG 940          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 3.898e-31
Identity = 65/169 (38.46%), Postives = 105/169 (62.13%), Query Frame = -2
Query:  269 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAER 775
            YL +  +PK++HRD+K++NILLD ++ A V DFGLAKL+  + ++VTT V GT G++APEY  TG  +EK+D++ +GI+++E+ITG+   D +R   + +  L+DW+           +VDP +        +++++ VAL C       RPKM  ++ MLE + L  R
Sbjct:  267 YLHEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLAKLLGSESSYVTTRVMGTFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNPVDYSRPQGETN--LVDWLKSMVGNRRSEEVVDPKIPEPPSSKALKRVLLVALRCVDPDANKRPKMGHIIHMLEAEDLLYR 433          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.898e-31
Identity = 64/164 (39.02%), Postives = 110/164 (67.07%), Query Frame = -2
Query:  284 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGD 775
            YL     P+IIHRD+K++NILLD   EA V DFGLAKL++ +++H+TT V GT G++APEY+ +G+++EKTDV+ +G+++LE+++G+R  D + +  +  + ++ W+           +VDP+ +   +E+ ++ L+ +A  C   SP +RP M  VV++LE +
Sbjct:  416 YLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFI--EKGLNVVGWLKFLISEKRPRDIVDPNCEGMQMES-LDALLSIATQCVSPSPEERPTMHRVVQLLESE 576          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 6.648e-31
Identity = 82/198 (41.41%), Postives = 111/198 (56.06%), Query Frame = -2
Query:  182 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAERWDEWQKVEVLRQEVELAPHPNSDWIVDST 775
            YL +    +I+HRDVKA+NILLD      + DFGLAKL D K TH++T V GTIG++APEY   G  +EKTDV+ +G++ LEL++G+   D      ++   LL+W            L+D  L +  +E E +++I +ALLCTQ S   RP MS VV ML GD           VE+   +V   P   SDW  D T
Sbjct:  805 YLHEEASVRIVHRDVKASNILLDSRLVPQISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSD--ENLEEEKKYLLEWAWNLHEKSRDIELIDDKLTDFNME-EAKRMIGIALLCTQTSHALRPPMSRVVAMLSGD-----------VEI--GDVTSKPGYVSDWRFDDT 986          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 1.134e-30
Identity = 84/198 (42.42%), Postives = 111/198 (56.06%), Query Frame = -2
Query:  182 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAERWDEWQKVEVLRQEVELAPHPNSDWIVDST 775
            YL +    +I+HRDVKA+NILLD +    V DFGLAKL D K TH++T V GTIG++APEY   G  +EKTDV+ +G++ LEL++G+   D      D+   LL+W            L+D  L    +E E +++I +ALLCTQ S   RP MS VV ML GD           VEV   +V   P   +DW  D T
Sbjct:  804 YLHEEARLRIVHRDVKASNILLDSKLVPKVSDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSD--ENLEDEKRYLLEWAWNLHEKGREVELIDHQLTEFNME-EGKRMIGIALLCTQTSHALRPPMSRVVAMLSGD-----------VEV--SDVTSKPGYLTDWRFDDT 985          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: CRK3_ARATH (Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 9.600e-30
Identity = 65/163 (39.88%), Postives = 103/163 (63.19%), Query Frame = -2
Query:  287 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 775
            YL +  + +IIHRD+K +NILL+++F   + DFGLA+L     TH++TA+ GT+G++APEY+  GK +EK DV+ +G++++E+ITG+R     +    D   +L  V            VDP L +N+ + E  +L+Q+ LLC Q +   RP MS VV+M++G
Sbjct:  435 YLHEESNLRIIHRDIKLSNILLEDDFTPRIADFGLARLFPEDKTHISTAIAGTLGYMAPEYVVRGKLTEKADVYSFGVLMIEVITGKRNNAFVQ----DAGSILQSVWSLYRTSNVEEAVDPILGDNFNKIEASRLLQIGLLCVQAAFDQRPAMSVVVKMMKG 593          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: ERL1_ARATH (LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.061e-28
Identity = 67/162 (41.36%), Postives = 101/162 (62.35%), Query Frame = -2
Query:  293 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVE-AEVEQLIQVALLCTQGSPMDRPKMSEVVRML 775
            YL     P+IIHRD+K++NILLDE FEA + DFG+AK +    TH +T V GTIG+I PEY  T + +EK+D++ +GI+LLEL+TG++A        D++  L   +            VDP++    ++   + +  Q+ALLCT+ +P++RP M EV R+L
Sbjct:  760 YLHHDCTPRIIHRDIKSSNILLDENFEAHLSDFGIAKSIPASKTHASTYVLGTIGYIDPEYARTSRINEKSDIYSFGIVLLELLTGKKAV-------DNEANLHQLILSKADDNTVMEAVDPEVTVTCMDLGHIRKTFQLALLCTKRNPLERPTMLEVSRVL 914          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.386e-28
Identity = 65/165 (39.39%), Postives = 106/165 (64.24%), Query Frame = -2
Query:  284 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAE-VEQLIQVALLCTQGSPMDRPKMSEVVRMLEGD 775
            YL     P+IIHRD+K++NILLD   EA V DFGLAKL++ +++H+TT V GT G++APEY+ +G+++EKTDV+ +G+++LE+++G+   D + +  +    ++ W+           +V  DL    VE E ++ L+ +A  C   SP +RP M  VV++LE +
Sbjct:  414 YLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKLPTDASFI--EKGFNIVGWLNFLISENRAKEIV--DLSCEGVERESLDALLSIATKCVSSSPDERPTMHRVVQLLESE 574          
The following BLAST results are available for this feature:
BLAST of CF835011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 244
Match NameE-valueIdentityDescription
Y1534_ARATH9.277e-3342.26Probable LRR receptor-like serine/threonine-protei... [more]
Y5343_ARATH2.067e-3242.94Probable LRR receptor-like serine/threonine-protei... [more]
Y5344_ARATH1.750e-3141.10Probable LRR receptor-like serine/threonine-protei... [more]
Y1154_ARATH3.898e-3138.46Probable serine/threonine-protein kinase At1g01540... [more]
FEI1_ARATH3.898e-3139.02LRR receptor-like serine/threonine-protein kinase ... [more]
Y1561_ARATH6.648e-3141.41Probable LRR receptor-like serine/threonine-protei... [more]
Y5614_ARATH1.134e-3042.42Probable LRR receptor-like serine/threonine-protei... [more]
CRK3_ARATH9.600e-3039.88Cysteine-rich receptor-like protein kinase 3 OS=Ar... [more]
ERL1_ARATH1.061e-2841.36LRR receptor-like serine/threonine-protein kinase ... [more]
FEI2_ARATH1.386e-2839.39LRR receptor-like serine/threonine-protein kinase ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_06I10_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06I10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835011 ID=CF835011; Name=CF835011; organism=Citrus sinensis; type=EST; length=776bp
CAATGCTGAAGGGCTTACTGAAATCCTTATATCCTCGTTAAATTTAAAAA
AAAAAAATCCAAGAACCCTTATGATTAAAAAAAGGAATAAAAAAAAGTAG
TAAAATTTTCCTCTTTACTTATAGCTAATAGGAGTGACAGGGTCACCTTG
GACCAGATAACTCAACGGCATGAAGATTTTCTGTTGAGTCAACTATCCAA
TCTGAATTAGGATGAGGGGCTAATTCTACTTCTTGGCGGAGAACTTCCAC
CTTTTGCCACTCATCCCACCGCTCTGCCAAGCCATCACCTTCAAGCATTC
TAACAACTTCCGACATCTTGGGCCGGTCCATAGGGGAGCCTTGAGTGCAG
AGCAACGCAACCTGGATAAGTTGCTCCACCTCAGCTTCCACATAATTGTT
CTGGAGATCAGGGTCAACTAGCATTTCTAACTTCTTTTCCTTCAGAAGTC
CTTTCACCCAATCAAGCAGCATGACATCATCATCATTTGCCAGACGAGCA
AGATCAAAGGCTCTCTGTCCAGTGATTAGCTCTAGAAGCATAATCCCATA
ACCAAAGACATCAGTTTTCTCTGAAGATTTTCCAGTAGAAAGGTATTCTG
GAGCTATATGCCCAATGGTGCCACGGACTGCCGTAGTGACATGGGTATCC
TTGTAGTCCATAAGTTTAGCCAACCCAAAGTCCCCAACAACAGCTTCAAA
CTCCTCATCCAACAAAATGTTAGCCGCTTTCACATCACGGTGAATGATCT
TTGGATCACCATGATCCTGCAAATAC
back to top