CF835011

Overview
NameCF835011
Unique NameCF835011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CF835011_ssr475 microsatellite CF835011_ssr475:475..486. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 119.013 bits (297), Expect = 2.891e-26
Identity = 60/162 (37.04%), Postives = 98/162 (60.49%), Query Frame = -2
Query:  290 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 775
            YL +  DP I+HRD+K++NILLDE F + + DFGLA+LM   +THV+T + GT+G+I PEY     ++ K DV+ +G++LLEL+T +R  D+ +     D  L+ WV           + DP + +   + E+ +++++A LC   +P  RP   ++V  L+
Sbjct:  847 YLHEGCDPHILHRDIKSSNILLDENFNSHLADFGLARLMSPYETHVSTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTDKRPVDMCKPKGCRD--LISWVVKMKHESRASEVFDPLIYSKENDKEMFRVLEIACLCLSENPKQRPTTQQLVSWLD 1006          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: CRK1_ARATH (Cysteine-rich receptor-like protein kinase 1 OS=Arabidopsis thaliana GN=CRK1 PE=2 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 2.891e-26
Identity = 61/162 (37.65%), Postives = 94/162 (58.02%), Query Frame = -2
Query:  290 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 775
            YL    + KIIHRD+K +NILLD      + DFGL + M    T   T + GT+G++APEYL  G+ +EK DV+ +G++++E++TG++  + A       V+   W             +DP L+ ++VE E  +++Q+ LLC Q S   RP MSE+V ML+
Sbjct:  430 YLHRGSEVKIIHRDIKTSNILLDRNLSPKIADFGLIRSMGTDKTQTNTGIAGTLGYLAPEYLIKGQLTEKADVYAFGVLIIEIVTGKK--NNAFTQGTSSVLYSVW--EHFKANTLDRSIDPRLKGSFVEEEALKVLQIGLLCVQSSVELRPSMSEIVFMLQ 587          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.775e-26
Identity = 63/164 (38.41%), Postives = 88/164 (53.66%), Query Frame = -2
Query:  284 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGD 775
            YL +  +  +IHRD+K +N+L++++    +GDFGLA+L +      TT V GTIG++APE    GKSS  +DVF +G++LLE+++G+R  D           L DWV            VDP L   Y   E    + V LLC    P  RP M  V+R L GD
Sbjct:  477 YLHEEWEKVVIHRDIKPSNVLIEDDMNPRLGDFGLARLYERGSQSNTTVVVGTIGYMAPELARNGKSSSASDVFAFGVLLLEIVSGRRPTD------SGTFFLADWVMELHARGEILHAVDPRLGFGYDGVEARLALVVGLLCCHQRPTSRPSMRTVLRYLNGD 634          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.931e-26
Identity = 65/162 (40.12%), Postives = 100/162 (61.73%), Query Frame = -2
Query:  290 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 775
            YL    +P +IHRDVK++NILLDE+FEA + DFGLA+L+   DTHVTT + GT+G+I PEY  +  ++ + DV+ +G++LLEL+TG+R  ++ +  +  D  L+  V           L+D  ++ N  E  V +++++A  C    P  RP + EVV  LE
Sbjct:  867 YLHKVCEPNVIHRDVKSSNILLDEKFEAHLADFGLARLLRPYDTHVTTDLVGTLGYIPPEYSQSLIATCRGDVYSFGVVLLELVTGRRPVEVCKGKSCRD--LVSRVFQMKAEKREAELIDTTIRENVNERTVLEMLEIACKCIDHEPRRRPLIEEVVTWLE 1026          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: IKU2_ARATH (Receptor-like protein kinase HAIKU2 OS=Arabidopsis thaliana GN=IKU2 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.931e-26
Identity = 67/165 (40.61%), Postives = 99/165 (60.00%), Query Frame = -2
Query:  290 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH---VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 775
            YL    D  +IHRDVK++NILLDEE+   + DFGLAK++             V+GT+G+IAPEY  T K +EK+DV+ +G++L+EL+TG++  +     N+D VM +  V           L+D  +++ Y E +  +++ +ALLCT  SP  RP M  VV MLE
Sbjct:  801 YLHHGLDRPVIHRDVKSSNILLDEEWRPRIADFGLAKIIQADSVQRDFSAPLVKGTLGYIAPEYAYTTKVNEKSDVYSFGVVLMELVTGKKPLETDFGENNDIVMWVWSVSKETNREMMMKLIDTSIEDEYKE-DALKVLTIALLCTDKSPQARPFMKSVVSMLE 964          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 6.440e-26
Identity = 64/174 (36.78%), Postives = 91/174 (52.30%), Query Frame = -2
Query:  257 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGD-GLAERWDEW 775
            YL +  +  +IHRDVK +N+L+D +    +GDFGLA+L +      TT V GTIG++APE    G SS  +DVF +G++LLE+++G++  D           + DWV            +DP L + Y E E    + V LLC    P  RP M  V+R L  D  + E  D W
Sbjct:  478 YLHEEWEQIVIHRDVKPSNVLIDSDMNPRLGDFGLARLYERGSQSCTTVVVGTIGYMAPELARNGNSSSASDVFAFGVLLLEIVSGRKPTD------SGTFFIADWVMELQASGEILSAIDPRLGSGYDEGEARLALAVGLLCCHHKPESRPLMRMVLRYLNRDEDVPEIHDNW 645          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: LRKA1_ARATH (Lectin-domain containing receptor kinase A4.1 OS=Arabidopsis thaliana GN=LECRKA4.1 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.098e-25
Identity = 66/183 (36.07%), Postives = 95/183 (51.91%), Query Frame = -2
Query:  230 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG-DGLAERWDEWQKVEVLRQE 775
            YL +  +  +IHRDVK +N+L+D +    +GDFGLA+L +      TTA+ GTIG++APE    G  S  +DVF +G++LLE++ G++  D           L+DWV            +DP L + Y   E    + V LLC    P  RP M  V+R L G + + E  DEW   +  R E
Sbjct:  481 YLHEEWEKIVIHRDVKPSNVLIDSKMNPRLGDFGLARLYERGTLSETTALVGTIGYMAPELSRNGNPSSASDVFAFGVLLLEIVCGRKPTD------SGTFFLVDWVMELHANGEILSAIDPRLGSGYDGGEARLALAVGLLCCHQKPASRPSMRIVLRYLNGEENVPEIDDEWGYSKSSRSE 657          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: CRK42_ARATH (Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.098e-25
Identity = 62/166 (37.35%), Postives = 96/166 (57.83%), Query Frame = -2
Query:  293 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYV-----EAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 775
            YL      +IIHRD+K +N+LLD++    + DFGLA+      TH++T + GT+G++APEY+  G+ +EK DV+ +G+++LE+  G R          +   LL  V            +DP L++ ++     EAE  ++++V LLCTQ SP  RP M EV+RML
Sbjct:  427 YLHGGSPVRIIHRDIKTSNVLLDDQLNPKIADFGLARCFGLDKTHLSTGIAGTLGYMAPEYVVRGQLTEKADVYSFGVLVLEIACGTRINAFV----PETGHLLQRVWNLYTLNRLVEALDPCLKDEFLQVQGSEAEACKVLRVGLLCTQASPSLRPSMEEVIRML 588          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.435e-25
Identity = 69/164 (42.07%), Postives = 99/164 (60.37%), Query Frame = -2
Query:  290 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM-DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPD-LQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 775
            YL +  DP IIHRDVK+ NILLDE   A V DFGL+KL+ D +  HVTT V+GT+G++ PEY  T + +EK+DV+G+G+++LEL+TG+   D       +    +D             L+D   +QN+      E+ + VAL C +   ++RP MSEVV+ LE
Sbjct:  745 YLHELADPPIIHRDVKSNNILLDEHLTAKVADFGLSKLVGDPEKAHVTTQVKGTMGYLDPEYYMTNQLTEKSDVYGFGVVMLELLTGKSPIDRGSYVVKEVKKKMD---KSRNLYDLQELLDTTIIQNSGNLKGFEKYVDVALQCVEPEGVNRPTMSEVVQELE 905          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: CRK28_ARATH (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=2 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 1.874e-25
Identity = 65/164 (39.63%), Postives = 93/164 (56.71%), Query Frame = -2
Query:  293 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT---HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 775
            YL +    +IIHRD+KA+NILLD+E    + DFGLAKL D   T     T+ + GT G++APEY   G+ S KTDVF +G++++E+ITG+   +     +++   LL WV           ++DP L      +E+ + I + LLC Q SP  RP M  V  ML
Sbjct:  473 YLHEDSRYRIIHRDLKASNILLDQEMNPKIADFGLAKLYDTDQTSTHRFTSKIAGTYGYMAPEYAIYGQFSVKTDVFSFGVLVIEIITGKGNNNGRSNDDEEAENLLSWVWRCWREDIILSVIDPSLTTG-SRSEILRCIHIGLLCVQESPASRPTMDSVALML 635          
The following BLAST results are available for this feature:
BLAST of CF835011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 244
Match NameE-valueIdentityDescription
PSKR1_ARATH2.891e-2637.04Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
CRK1_ARATH2.891e-2637.65Cysteine-rich receptor-like protein kinase 1 OS=Ar... [more]
LRKA2_ARATH3.775e-2638.41Lectin-domain containing receptor kinase A4.2 OS=A... [more]
PSKR2_ARATH4.931e-2640.12Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]
IKU2_ARATH4.931e-2640.61Receptor-like protein kinase HAIKU2 OS=Arabidopsis... [more]
LRKA3_ARATH6.440e-2636.78Lectin-domain containing receptor kinase A4.3 OS=A... [more]
LRKA1_ARATH1.098e-2536.07Lectin-domain containing receptor kinase A4.1 OS=A... [more]
CRK42_ARATH1.098e-2537.35Cysteine-rich receptor-like protein kinase 42 OS=A... [more]
Y5977_ARATH1.435e-2542.07Probable leucine-rich repeat receptor-like protein... [more]
CRK28_ARATH1.874e-2539.63Cysteine-rich receptor-like protein kinase 28 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06I10_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06I10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835011 ID=CF835011; Name=CF835011; organism=Citrus sinensis; type=EST; length=776bp
CAATGCTGAAGGGCTTACTGAAATCCTTATATCCTCGTTAAATTTAAAAA
AAAAAAATCCAAGAACCCTTATGATTAAAAAAAGGAATAAAAAAAAGTAG
TAAAATTTTCCTCTTTACTTATAGCTAATAGGAGTGACAGGGTCACCTTG
GACCAGATAACTCAACGGCATGAAGATTTTCTGTTGAGTCAACTATCCAA
TCTGAATTAGGATGAGGGGCTAATTCTACTTCTTGGCGGAGAACTTCCAC
CTTTTGCCACTCATCCCACCGCTCTGCCAAGCCATCACCTTCAAGCATTC
TAACAACTTCCGACATCTTGGGCCGGTCCATAGGGGAGCCTTGAGTGCAG
AGCAACGCAACCTGGATAAGTTGCTCCACCTCAGCTTCCACATAATTGTT
CTGGAGATCAGGGTCAACTAGCATTTCTAACTTCTTTTCCTTCAGAAGTC
CTTTCACCCAATCAAGCAGCATGACATCATCATCATTTGCCAGACGAGCA
AGATCAAAGGCTCTCTGTCCAGTGATTAGCTCTAGAAGCATAATCCCATA
ACCAAAGACATCAGTTTTCTCTGAAGATTTTCCAGTAGAAAGGTATTCTG
GAGCTATATGCCCAATGGTGCCACGGACTGCCGTAGTGACATGGGTATCC
TTGTAGTCCATAAGTTTAGCCAACCCAAAGTCCCCAACAACAGCTTCAAA
CTCCTCATCCAACAAAATGTTAGCCGCTTTCACATCACGGTGAATGATCT
TTGGATCACCATGATCCTGCAAATAC
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