CF835011

Overview
NameCF835011
Unique NameCF835011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CF835011_ssr475 microsatellite CF835011_ssr475:475..486. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.874e-25
Identity = 64/161 (39.75%), Postives = 100/161 (62.11%), Query Frame = -2
Query:  290 HGDP-KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWV-XXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 763
            H DP K+I+RD+KA+NILLD ++ A + DFGLA+     D ++V+T V GT G+ APEY+S+G  + ++DV+ +G++LLE+++G+RA D  R A +++  L+DW             +VD  L   Y+  E  ++  VA+ C    P  RP M +VVR L+
Sbjct:  192 HSDPVKVIYRDIKASNILLDADYNAKLSDFGLARDGPMGDLSYVSTRVMGTYGYAAPEYMSSGHLNARSDVYSFGVLLLEILSGKRALDHNRPAKEEN--LVDWARPYLTSKRKVLLIVDNRLDTQYLPEEAVRMASVAVQCLSFEPKSRPTMDQVVRALQ 350          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.447e-25
Identity = 64/163 (39.26%), Postives = 97/163 (59.51%), Query Frame = -2
Query:  293 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWV-XXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 775
            YL D   P +I+RD+K +NILL E+++  + DFGLAK+    D THV+T V GT G+ AP+Y  TG+ + K+D++ +G++LLELITG++A D  +   D +  L+ W             +VDP LQ  Y    + Q + ++ +C Q  P  RP +S+VV  L
Sbjct:  217 YLHDRMTPPVIYRDLKCSNILLGEDYQPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNTKTRKDQN--LVGWARPLFKDRRNFPKMVDPLLQGQYPVRGLYQALAISAMCVQEQPTMRPVVSDVVLAL 377          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: PAM74_ARATH (Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.447e-25
Identity = 60/163 (36.81%), Postives = 95/163 (58.28%), Query Frame = -2
Query:  290 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 775
            YL     P I+HRD+K  NILLDE+ +A + DFGL++      +TH++T V GT G++ PEY  T +  EK+DV+ +GI+LLE+IT Q   D +R  +     +  WV           ++DP+L  +Y    V +++++A+ C   S ++RP MS+V   L+
Sbjct:  691 YLHSGCTPPIVHRDIKTTNILLDEQLKAKLADFGLSRSFPIGGETHISTVVAGTPGYLDPEYYQTTRLGEKSDVYSFGIVLLEIITNQPVIDQSRSKSH----ISQWVGFELTRGDITKIMDPNLNGDYESRSVWRVLELAMSCANPSSVNRPNMSQVANELK 849          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: WAK5_ARATH (Wall-associated receptor kinase 5 OS=Arabidopsis thaliana GN=WAK5 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.196e-25
Identity = 60/173 (34.68%), Postives = 98/173 (56.65%), Query Frame = -2
Query:  257 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAERWDEW 775
            YL  +    IIHRDVK ANILLDE   A V DFG ++L+      +TT V+GT+G++ PEY +TG  +EK+DV+ +G++L+EL++G++A    R  +     L+ +            ++D  + N Y + E+++  ++A+ CT+    +RP M EV   LE   +     +W
Sbjct:  520 YLHSYASIPIIHRDVKTANILLDENLTAKVADFGASRLIPMDQEQLTTMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGEKALCFERPQSSKH--LVSYFVSAMKENRLHEIIDGQVMNEYNQREIQESARIAVECTRIMGEERPSMKEVAAELEALRVKTTKHQW 690          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: RLK5_ARATH (Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.174e-25
Identity = 63/165 (38.18%), Postives = 100/165 (60.61%), Query Frame = -2
Query:  290 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAK---LMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 775
            YL     P I+HRDVK++NILLD ++ A V DFG+AK   +   K     + + G+ G+IAPEY+ T + +EK+D++ +G++LLEL+TG++  D + L + D   +  WV           ++DP L   + E E+ ++I + LLCT   P++RP M +VV ML+
Sbjct:  806 YLHHDCVPPIVHRDVKSSNILLDSDYGAKVADFGIAKVGQMSGSKTPEAMSGIAGSCGYIAPEYVYTLRVNEKSDIYSFGVVLLELVTGKQPTD-SELGDKD---MAKWVCTALDKCGLEPVIDPKLDLKFKE-EISKVIHIGLLCTSPLPLNRPSMRKVVIMLQ 965          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.174e-25
Identity = 64/167 (38.32%), Postives = 96/167 (57.49%), Query Frame = -2
Query:  278 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGL 775
            YL      KIIHRD+KA+NILLD E E  V DFG+A++     +   T  V GT G+I+PEYL  G+ S K+DV+ +G+++LE+I+G+R  +     ++    L+ +            LVD +L+ NY   EV + I +ALLC Q  P  RP +S ++ ML  + +
Sbjct:  433 YLHHDSPLKIIHRDLKASNILLDAEMEPKVADFGMARIFRVDQSRADTRRVVGTHGYISPEYLMHGQFSVKSDVYSFGVLVLEIISGKRNSNFHE-TDESGKNLVTYAWRHWRNGSPLELVDSELEKNYQSNEVFRCIHIALLCVQNDPEQRPNLSTIIMMLTSNSI 598          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.174e-25
Identity = 66/164 (40.24%), Postives = 93/164 (56.71%), Query Frame = -2
Query:  293 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT---HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 775
            YL +    +IIHRD+KA+NILLD+E    + DFGLAKL D   T     T+ + GT G++APEY   G+ S KTDVF +G++++E+ITG+R  +     ++D   LL WV           ++DP L       E+ + I + LLC Q S   RP M+ V  ML
Sbjct:  469 YLHEDSRFRIIHRDLKASNILLDQEMNPKIADFGLAKLFDSGQTMTHRFTSRIAGTYGYMAPEYAMHGQFSVKTDVFSFGVLVIEIITGKRNNNGGSNGDEDAEDLLSWVWRSWREDTILSVIDPSLTAG-SRNEILRCIHIGLLCVQESAATRPTMATVSLML 631          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: CRK27_ARATH (Cysteine-rich receptor-like protein kinase 27 OS=Arabidopsis thaliana GN=CRK27 PE=2 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 5.451e-25
Identity = 65/165 (39.39%), Postives = 95/165 (57.58%), Query Frame = -2
Query:  284 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGD 775
            YL +  +  IIHRD+K++N+LLDE+    + DFG+A+  D+ +T  VT  V GT G++APEY   G+ S KTDV+ +G+++LE+ITG+R   L  L    D+    W            L+DP L   + + E  Q +++AL C Q +P  RP M  VV ML  D
Sbjct:  445 YLHEGSEFPIIHRDLKSSNVLLDEQMLPKISDFGMARQFDFDNTQAVTRRVVGTYGYMAPEYAMHGRFSVKTDVYSFGVLVLEIITGKRNSGLG-LGEGTDLPTFAW--QNWIEGTSMELIDPVLLQTHDKKESMQCLEIALSCVQENPTKRPTMDSVVSMLSSD 606          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: Y5148_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g61480 OS=Arabidopsis thaliana GN=At5g61480 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 7.120e-25
Identity = 64/165 (38.79%), Postives = 102/165 (61.82%), Query Frame = -2
Query:  290 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLV-DPDLQN--NYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 775
            YL    DP I+HRD+K +NILLD +FEA V DFG+AKL+   ++   + V G+ G+IAPEY  T +  +K+D++ YG++LLE+ITG+R+ +       +   ++DWV            V D  +    + +  E++Q++++ALLCT  SP DRP M +V+ +L+
Sbjct:  839 YLHHDCDPVIVHRDLKPSNILLDADFEARVADFGVAKLIQTDES--MSVVAGSYGYIAPEYAYTLQVDKKSDIYSYGVILLEIITGKRSVE---PEFGEGNSIVDWVRSKLKTKEDVEEVLDKSMGRSCSLIREEMKQMLRIALLCTSRSPTDRPPMRDVLLILQ 998          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: HSL1_ARATH (Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 7.120e-25
Identity = 68/194 (35.05%), Postives = 111/194 (57.22%), Query Frame = -2
Query:  200 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY--KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAERWDEWQKVEVLRQEVELAPHPNSD 775
            YL     P I+HRD+K+ NIL+D ++ A V DFG+AK +D   K     + + G+ G+IAPEY  T + +EK+D++ +G+++LE++T +R  D   L   D   L+ WV           ++DP L + + E E+ +++ V LLCT   P++RP M  VV+ML+  G  +  D   K+    ++ +L P+ N D
Sbjct:  802 YLHHDSVPPIVHRDIKSNNILIDGDYGARVADFGVAKAVDLTGKAPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILEIVTRKRPVD-PELGEKD---LVKWVCSTLDQKGIEHVIDPKLDSCFKE-EISKILNVGLLCTSPLPINRPSMRRVVKMLQEIGGGDE-DSLHKIRD-DKDGKLTPYYNED 988          
The following BLAST results are available for this feature:
BLAST of CF835011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 244
Match NameE-valueIdentityDescription
BIK1_ARATH1.874e-2539.75Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
RLCK7_ARATH2.447e-2539.26Probable serine/threonine-protein kinase RLCKVII O... [more]
PAM74_ARATH2.447e-2536.81Probable LRR receptor-like serine/threonine-protei... [more]
WAK5_ARATH3.196e-2534.68Wall-associated receptor kinase 5 OS=Arabidopsis t... [more]
RLK5_ARATH4.174e-2538.18Receptor-like protein kinase 5 OS=Arabidopsis thal... [more]
CRK33_ARATH4.174e-2538.32Putative cysteine-rich receptor-like protein kinas... [more]
CRK29_ARATH4.174e-2540.24Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
CRK27_ARATH5.451e-2539.39Cysteine-rich receptor-like protein kinase 27 OS=A... [more]
Y5148_ARATH7.120e-2538.79Probable leucine-rich repeat receptor-like protein... [more]
HSL1_ARATH7.120e-2535.05Receptor-like protein kinase HSL1 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06I10_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06I10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835011 ID=CF835011; Name=CF835011; organism=Citrus sinensis; type=EST; length=776bp
CAATGCTGAAGGGCTTACTGAAATCCTTATATCCTCGTTAAATTTAAAAA
AAAAAAATCCAAGAACCCTTATGATTAAAAAAAGGAATAAAAAAAAGTAG
TAAAATTTTCCTCTTTACTTATAGCTAATAGGAGTGACAGGGTCACCTTG
GACCAGATAACTCAACGGCATGAAGATTTTCTGTTGAGTCAACTATCCAA
TCTGAATTAGGATGAGGGGCTAATTCTACTTCTTGGCGGAGAACTTCCAC
CTTTTGCCACTCATCCCACCGCTCTGCCAAGCCATCACCTTCAAGCATTC
TAACAACTTCCGACATCTTGGGCCGGTCCATAGGGGAGCCTTGAGTGCAG
AGCAACGCAACCTGGATAAGTTGCTCCACCTCAGCTTCCACATAATTGTT
CTGGAGATCAGGGTCAACTAGCATTTCTAACTTCTTTTCCTTCAGAAGTC
CTTTCACCCAATCAAGCAGCATGACATCATCATCATTTGCCAGACGAGCA
AGATCAAAGGCTCTCTGTCCAGTGATTAGCTCTAGAAGCATAATCCCATA
ACCAAAGACATCAGTTTTCTCTGAAGATTTTCCAGTAGAAAGGTATTCTG
GAGCTATATGCCCAATGGTGCCACGGACTGCCGTAGTGACATGGGTATCC
TTGTAGTCCATAAGTTTAGCCAACCCAAAGTCCCCAACAACAGCTTCAAA
CTCCTCATCCAACAAAATGTTAGCCGCTTTCACATCACGGTGAATGATCT
TTGGATCACCATGATCCTGCAAATAC
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