CF835011

Overview
NameCF835011
Unique NameCF835011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CF835011_ssr475 microsatellite CF835011_ssr475:475..486. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: Y4291_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidopsis thaliana GN=At4g29180 PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.214e-24
Identity = 65/187 (34.76%), Postives = 109/187 (58.29%), Query Frame = -2
Query:  230 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVV----RMLEGDGLAERWDEWQKVEVLRQE 775
            YL     P I+HRDVK ANILL++  EA + DFGL+K+    D +HV TAV GT G++ PEY +T K +EK+DV+ +GI+LLELITG+R+  + +  + + + ++ +V           +VDP L  ++      + ++VA+ C +    +RP  +++V    + L  +   E     +K EV++++
Sbjct:  691 YLHHGCRPPIVHRDVKTANILLNDNLEAKIADFGLSKVFPEDDLSHVVTAVMGTPGYVDPEYYNTFKLNEKSDVYSFGIVLLELITGKRS--IMKTDDGEKMNVVHYVEPFLKMGDIDGVVDPRLHGDFSSNSAWKFVEVAMSCVRDRGTNRPNTNQIVSDLKQCLAAELAREPKSNHEKKEVVKEK 875          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.214e-24
Identity = 70/183 (38.25%), Postives = 110/183 (60.11%), Query Frame = -2
Query:  239 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQV---ALLCTQGSPMDRPKMSEVVRMLEGDGLAERWDEWQKVEVL 775
            YL     P I+HRD+KA NIL+  +FE  + DFGLAKL+D  D    +  V G+ G+IAPEY  + K +EK+DV+ YG+++LE++TG++  D       + + L+DWV           ++D  L++   EAE ++++QV   ALLC   SP +RP M +V  ML+   + +  +E+ KV++L
Sbjct:  906 YLHHDCLPPIVHRDIKANNILIGLDFEPYIADFGLAKLVDEGDIGRCSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPID---PTVPEGIHLVDWV---RQNRGSLEVLDSTLRSR-TEAEADEMMQVLGTALLCVNSSPDERPTMKDVAAMLK--EIKQEREEYAKVDLL 1079          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.214e-24
Identity = 58/155 (37.42%), Postives = 94/155 (60.65%), Query Frame = -2
Query:  290 PKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 754
            P IIHRD+KA+NILLD +FE  V DFGLA+L+   ++HV+T + GT G+I PEY  + +++ K DV+ +G++LLEL+TG+           +   L+ W            ++DP L +  ++    +L+Q+A+LC   +P  RP M +V++ L+
Sbjct: 1037 PHIIHRDIKASNILLDGDFEPKVADFGLARLISACESHVSTVIAGTFGYIPPEYGQSARATTKGDVYSFGVILLELVTGKEPTG-PDFKESEGGNLVGWAIQKINQGKAVDVIDPLLVSVALKNSQLRLLQIAMLCLAETPAKRPNMLDVLKALK 1190          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: RCH1_ARATH (LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.586e-24
Identity = 71/181 (39.23%), Postives = 106/181 (58.56%), Query Frame = -2
Query:  245 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQ---VALLCTQGSPMDRPKMSEVVRMLEGDGLAERWDEWQKVE 775
            YL     P I+HRD+KA NIL+  +FE  +GDFGLAKL+D  D    +  + G+ G+IAPEY  + K +EK+DV+ YG+++LE++TG++  D       D + ++DWV           ++D  LQ    E+EVE+++Q   VALLC    P DRP M +V  ML    + +  +E  KV+
Sbjct:  907 YLHHDCVPPIVHRDIKANNILIGPDFEPYIGDFGLAKLVDDGDFARSSNTIAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPID---PTIPDGLHIVDWV----KKIRDIQVIDQGLQAR-PESEVEEMMQTLGVALLCINPIPEDRPTMKDVAAML--SEICQEREESMKVD 1077          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.072e-24
Identity = 60/159 (37.74%), Postives = 92/159 (57.86%), Query Frame = -2
Query:  302 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVV 775
            YL +   P ++HRDVK  NILL+E F+  + DFGL++    + +THV+T V GTIG++ PEY  T   +EK+DV+ +G++LL +IT Q   D     N +   + +WV           + DP+L  +Y    V + +++A+ C   S M RP MS+VV
Sbjct:  689 YLHNGCKPLMVHRDVKTTNILLNEHFDTKLADFGLSRSFPIEGETHVSTVVAGTIGYLDPEYYRTNWLTEKSDVYSFGVVLLVMITNQPVID----QNREKRHIAEWVGGMLTKGDIKSITDPNLLGDYNSGSVWKAVELAMSCMNPSSMTRPTMSQVV 843          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.072e-24
Identity = 60/162 (37.04%), Postives = 94/162 (58.02%), Query Frame = -2
Query:  290 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 775
            YL    +P I+HRD+K++NILL + F A + DFGLA+L+   DTHVTT + GT+G+I PEY     ++ K DV+ +G++LLEL+TG+R  D+ +     D  L+ WV           + DP + +     E+  ++++A  C   +P  RP   ++V  LE
Sbjct:  856 YLHQSCEPHILHRDIKSSNILLSDTFVAHLADFGLARLILPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGRRPMDVCKPRGSRD--LISWVLQMKTEKRESEIFDPFIYDKDHAEEMLLVLEIACRCLGENPKTRPTTQQLVSWLE 1015          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.706e-24
Identity = 62/163 (38.04%), Postives = 98/163 (60.12%), Query Frame = -2
Query:  290 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY-KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 775
            YL     P ++HRDVK+ NILLDE F+A + DFGL++     +++HV+T V GT G++ PEY  T + +EK+DV+ +GI+LLE+IT Q   + A    +++  + + V           +VDP+L   Y    V + +++A+ C   SP+ RP MS VV+ L+
Sbjct:  685 YLHSGCKPLMVHRDVKSMNILLDEHFQAKLADFGLSRSFSVGEESHVSTGVVGTPGYLDPEYYRTYRLTEKSDVYSFGIVLLEIITNQPVLEQA----NENRHIAERVRTMLTRSDISTIVDPNLIGEYDSGSVRKALKLAMSCVDPSPVARPDMSHVVQELK 843          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.706e-24
Identity = 62/163 (38.04%), Postives = 91/163 (55.83%), Query Frame = -2
Query:  290 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 775
            YL     P ++HRDVK  NILLDE F+A + DFGL++      +THV+TAV GT G++ PEY  T + +EK+DV+ +GI+LLE+IT +      R    +   +  WV           +VDP L  +Y    V + +++A+ C   S   RP MS+V   L+
Sbjct:  685 YLHTGCKPPMVHRDVKTTNILLDEHFQAKLADFGLSRSFPVGGETHVSTAVAGTPGYLDPEYYRTNRLNEKSDVYSFGIVLLEIITSRPVIQQTR----EKPHIAAWVGYMLTKGDIENVVDPRLNRDYEPTSVWKALEIAMSCVNPSSEKRPTMSQVTNELK 843          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 2.706e-24
Identity = 64/169 (37.87%), Postives = 94/169 (55.62%), Query Frame = -2
Query:  275 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVM-LLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLA 775
            YL       IIHRD+KA NILLD +    V DFG+A++     T   T  V GT G++APEY   GK S K+DV+ +G+++LE+++G +   L ++  D  +  L+ +            LVDP   +NY  +E+ + I +ALLC Q    DRP MS +V+ML    +A
Sbjct:  456 YLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFGMDQTEANTRRVVGTYGYMAPEYAMYGKFSMKSDVYSFGVLVLEIVSGMKNSSLDQM--DGSISNLVTYTWRLWSNGSPSELVDPSFGDNYQTSEITRCIHIALLCVQEDANDRPTMSAIVQMLTTSSIA 622          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.534e-24
Identity = 61/159 (38.36%), Postives = 93/159 (58.49%), Query Frame = -2
Query:  302 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVV 775
            YL +   P ++HRDVK  NILL+E FEA + DFGL++  +   +THV+T V GT G++ PEY  T   +EK+DV+ +GI+LLE+IT +   D +R    +   + +WV           ++DP L  +Y    V + +++A+ C   S   RP MS+VV
Sbjct:  690 YLHNGCKPPMVHRDVKTTNILLNEHFEAKLADFGLSRSFLIEGETHVSTVVAGTPGYLDPEYHRTNWLTEKSDVYSFGILLLEIITNRHVIDQSR----EKPHIGEWVGVMLTKGDIQSIMDPSLNEDYDSGSVWKAVELAMSCLNHSSARRPTMSQVV 844          
The following BLAST results are available for this feature:
BLAST of CF835011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 244
Match NameE-valueIdentityDescription
Y4291_ARATH1.214e-2434.76Probable LRR receptor-like serine/threonine-protei... [more]
RCH2_ARATH1.214e-2438.25Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]
EXS_ARATH1.214e-2437.42Leucine-rich repeat receptor protein kinase EXS OS... [more]
RCH1_ARATH1.586e-2439.23LRR receptor-like serine/threonine-protein kinase ... [more]
Y5181_ARATH2.072e-2437.74Probable LRR receptor-like serine/threonine-protei... [more]
PSKR1_DAUCA2.072e-2437.04Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
Y5169_ARATH2.706e-2438.04Probable LRR receptor-like serine/threonine-protei... [more]
Y2289_ARATH2.706e-2438.04Probable LRR receptor-like serine/threonine-protei... [more]
CRK20_ARATH2.706e-2437.87Putative cysteine-rich receptor-like protein kinas... [more]
Y5182_ARATH3.534e-2438.36Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06I10_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06I10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835011 ID=CF835011; Name=CF835011; organism=Citrus sinensis; type=EST; length=776bp
CAATGCTGAAGGGCTTACTGAAATCCTTATATCCTCGTTAAATTTAAAAA
AAAAAAATCCAAGAACCCTTATGATTAAAAAAAGGAATAAAAAAAAGTAG
TAAAATTTTCCTCTTTACTTATAGCTAATAGGAGTGACAGGGTCACCTTG
GACCAGATAACTCAACGGCATGAAGATTTTCTGTTGAGTCAACTATCCAA
TCTGAATTAGGATGAGGGGCTAATTCTACTTCTTGGCGGAGAACTTCCAC
CTTTTGCCACTCATCCCACCGCTCTGCCAAGCCATCACCTTCAAGCATTC
TAACAACTTCCGACATCTTGGGCCGGTCCATAGGGGAGCCTTGAGTGCAG
AGCAACGCAACCTGGATAAGTTGCTCCACCTCAGCTTCCACATAATTGTT
CTGGAGATCAGGGTCAACTAGCATTTCTAACTTCTTTTCCTTCAGAAGTC
CTTTCACCCAATCAAGCAGCATGACATCATCATCATTTGCCAGACGAGCA
AGATCAAAGGCTCTCTGTCCAGTGATTAGCTCTAGAAGCATAATCCCATA
ACCAAAGACATCAGTTTTCTCTGAAGATTTTCCAGTAGAAAGGTATTCTG
GAGCTATATGCCCAATGGTGCCACGGACTGCCGTAGTGACATGGGTATCC
TTGTAGTCCATAAGTTTAGCCAACCCAAAGTCCCCAACAACAGCTTCAAA
CTCCTCATCCAACAAAATGTTAGCCGCTTTCACATCACGGTGAATGATCT
TTGGATCACCATGATCCTGCAAATAC
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