CF835011

Overview
NameCF835011
Unique NameCF835011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CF835011_ssr475 microsatellite CF835011_ssr475:475..486. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: CRK37_ARATH (Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana GN=CRK37 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.102e-23
Identity = 63/165 (38.18%), Postives = 95/165 (57.58%), Query Frame = -2
Query:  290 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDP--DLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 775
            YL +    +IIHRD+KA+NILLD E    V DFG+A+L D  +T   T+ V GT G++APEY + G+ S K+DV+ +G+MLLE+I+G+    L +   +++  L  +V           ++DP     NN    EV +LI + LLC Q     RP ++ ++  LE
Sbjct:  457 YLHEDSQLRIIHRDLKASNILLDAEMNPKVADFGMARLFDMDETRGQTSRVVGTYGYMAPEYATYGQFSTKSDVYSFGVMLLEMISGKSNKKLEKEEEEEEEELPAFVWKRWIEGRFAEIIDPLAAPSNNISINEVMKLIHIGLLCVQEDISKRPSINSILFWLE 621          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.102e-23
Identity = 64/166 (38.55%), Postives = 95/166 (57.23%), Query Frame = -2
Query:  281 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDG 775
            YL +    +IIHRD+KA+NILLD E    V DFG+A+L +  +T   T+ V GT G++APEY+  G+ S K+DV+ +G+MLLE+I+G++        N +   L  +            ++DP L  N    E+ +LIQ+ LLC Q +   RP M+ V+  L  DG
Sbjct:  452 YLHEDSQLRIIHRDLKASNILLDAEMNPKVADFGMARLFNMDETRGETSRVVGTYGYMAPEYVRHGQFSAKSDVYSFGVMLLEMISGEKN------KNFETEGLPAFAWKRWIEGELESIIDPYLNEN-PRNEIIKLIQIGLLCVQENAAKRPTMNSVITWLARDG 610          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.102e-23
Identity = 55/157 (35.03%), Postives = 95/157 (60.51%), Query Frame = -2
Query:  290 PKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT-TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDL-QNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 754
            P IIHRD+K++N+LLDE+FEA V DFG+A+L+   DTH++ + + GT G++ PEY  + + + K DV+ YG++LLEL++G++  D      D++  L+ W            ++DP+L  +   + E+   +++A  C    P  RP M +++ M +
Sbjct:  981 PHIIHRDMKSSNVLLDEDFEARVSDFGMARLVSALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKPIDPGEFGEDNN--LVGWAKQLYREKRGAEILDPELVTDKSGDVELFHYLKIASQCLDDRPFKRPTMIQLMAMFK 1135          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.664e-23
Identity = 62/163 (38.04%), Postives = 93/163 (57.06%), Query Frame = -2
Query:  293 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLV-DPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 775
            +L D  +P +I+RD K++NILLDE F   + DFGLAKL    D +HV+T V GT G+ APEY  TG+ + K+DV+ +G++ LELITG++A D      + +  L+ W             + DP L+  +    + Q + VA +C Q     RP +++VV  L
Sbjct:  200 FLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSEMPHGEQN--LVAWARPLFNDRRKFIKLADPRLKGRFPTRALYQALAVASMCIQEQAATRPLIADVVTAL 360          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: CRK30_ARATH (Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana GN=CRK30 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.664e-23
Identity = 58/168 (34.52%), Postives = 98/168 (58.33%), Query Frame = -2
Query:  278 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVM-LLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGL 775
            YL       IIHRD+KA+NILLD +    + DFG+A+   D++    T  V GT G++ PEY++ G+ S K+DV+ +G+++LE+++G++     ++  D  V  L+ +V           LVDP +  +Y + EV + I + LLC Q +P++RP +S + +ML    +
Sbjct:  461 YLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNFRDHQTEDSTGRVVGTFGYMPPEYVAHGQFSTKSDVYSFGVLILEIVSGRKNSSFYQM--DGSVCNLVTYVWRLWNTDSSLELVDPAISGSYEKDEVTRCIHIGLLCVQENPVNRPALSTIFQMLTNSSI 626          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.664e-23
Identity = 62/165 (37.58%), Postives = 99/165 (60.00%), Query Frame = -2
Query:  290 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT-TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDL--QNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 775
            +L  +  P IIHRD+K++N+LLDE  EA V DFG+A+LM   DTH++ + + GT G++ PEY  + + S K DV+ YG++LLEL+TG+R  D     +++   L+ WV           + DP+L  ++  +E E+ Q ++VA+ C       RP M +V+ M +
Sbjct:  996 FLHHNCSPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSPDFGDNN---LVGWV-KQHAKLRISDVFDPELMKEDPALEIELLQHLKVAVACLDDRAWRRPTMVQVMAMFK 1156          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 8.703e-23
Identity = 66/161 (40.99%), Postives = 93/161 (57.76%), Query Frame = -2
Query:  302 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQR--AFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVV 775
            YL +    KIIHRD+KA+NILLD E    V DFG A+L D  +T   T  + GT G++APEYL+ G+ S K+DV+ +G+MLLE+I+G+R  +F+   LA         +            ++DP L  N    E+ +LIQ+ LLC Q +   RP MS V+
Sbjct:  460 YLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMISGERNNSFEGEGLA--------AFAWKRWVEGKPEIIIDPFLIEN-PRNEIIKLIQIGLLCVQENSTKRPTMSSVI 611          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: CRK24_ARATH (Cysteine-rich receptor-like protein kinase 24 OS=Arabidopsis thaliana GN=CRK24 PE=2 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 8.703e-23
Identity = 65/165 (39.39%), Postives = 92/165 (55.76%), Query Frame = -2
Query:  293 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDD---VMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML 775
            YL       IIHRD+KA NILLD +    + DFG+A+      T  TTA V GTIG++ PEY++ G+ S K+DV+ +G+++LE+I G++   +    N+ D     L+ +V           LVD  +  NY   EV + I + LLC Q +P DRP MS V  ML
Sbjct:  424 YLHQDSRLTIIHRDLKAGNILLDADMNPKIVDFGVARNFRVDQTEATTARVVGTIGYMPPEYVTNGQFSTKSDVYSFGVLILEIIGGKKNSSI----NETDGSISNLVTYVWRLWNNEPLLELVDAPMGENYDRNEVIRCIHIGLLCVQENPADRPTMSTVFHML 584          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.137e-22
Identity = 66/195 (33.85%), Postives = 103/195 (52.82%), Query Frame = -2
Query:  197 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRML-EGDGLAERWDEWQKVEVLRQEVELAPHPNSDW 775
            YL +   P ++HRDVK  NILL+E  +A + DFGL++      ++HV T V GT G++ PEY  T   SEK+DV+ +G++LLE++T Q   +     N +   + +WV           +VDP L  +Y    V +++++AL C   S   RP M  VV  L E   L     +  +   +++ VE +P   SD+
Sbjct:  681 YLHNGCRPPMVHRDVKPTNILLNERSQAKLADFGLSRSFPVDGESHVMTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVMN----KNRERPHINEWVMFMLTNGDIKSIVDPKLNEDYDTNGVWKVVELALACVNPSSSRRPTMPHVVMELNECLALEIERKQGSQATYIKESVEFSPSSASDF 871          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.137e-22
Identity = 59/163 (36.20%), Postives = 95/163 (58.28%), Query Frame = -2
Query:  290 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLE 775
            YL       +IHRDVK++NILLD+   A V DFG +K    + D++V+  VRGT G++ PEY  T + SEK+DVF +G++LLE+++G+   ++ R     +  L++W            +VDP ++  Y    + ++++VAL C +     RP M ++VR LE
Sbjct:  709 YLHTFPGRSVIHRDVKSSNILLDQSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKR--PRIEWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELE 869          
The following BLAST results are available for this feature:
BLAST of CF835011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 244
Match NameE-valueIdentityDescription
CRK37_ARATH5.102e-2338.18Cysteine-rich receptor-like protein kinase 37 OS=A... [more]
CRK36_ARATH5.102e-2338.55Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
BRL1_ARATH5.102e-2335.03Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
PBS1_ARATH6.664e-2338.04Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
CRK30_ARATH6.664e-2334.52Putative cysteine-rich receptor-like protein kinas... [more]
BRI1_ARATH6.664e-2337.58Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
CRK40_ARATH8.703e-2340.99Cysteine-rich receptor-like protein kinase 40 OS=A... [more]
CRK24_ARATH8.703e-2339.39Cysteine-rich receptor-like protein kinase 24 OS=A... [more]
Y5189_ARATH1.137e-2233.85Probable LRR receptor-like protein kinase At1g5189... [more]
NORK_MEDTR1.137e-2236.20Nodulation receptor kinase OS=Medicago truncatula ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06I10_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06I10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835011 ID=CF835011; Name=CF835011; organism=Citrus sinensis; type=EST; length=776bp
CAATGCTGAAGGGCTTACTGAAATCCTTATATCCTCGTTAAATTTAAAAA
AAAAAAATCCAAGAACCCTTATGATTAAAAAAAGGAATAAAAAAAAGTAG
TAAAATTTTCCTCTTTACTTATAGCTAATAGGAGTGACAGGGTCACCTTG
GACCAGATAACTCAACGGCATGAAGATTTTCTGTTGAGTCAACTATCCAA
TCTGAATTAGGATGAGGGGCTAATTCTACTTCTTGGCGGAGAACTTCCAC
CTTTTGCCACTCATCCCACCGCTCTGCCAAGCCATCACCTTCAAGCATTC
TAACAACTTCCGACATCTTGGGCCGGTCCATAGGGGAGCCTTGAGTGCAG
AGCAACGCAACCTGGATAAGTTGCTCCACCTCAGCTTCCACATAATTGTT
CTGGAGATCAGGGTCAACTAGCATTTCTAACTTCTTTTCCTTCAGAAGTC
CTTTCACCCAATCAAGCAGCATGACATCATCATCATTTGCCAGACGAGCA
AGATCAAAGGCTCTCTGTCCAGTGATTAGCTCTAGAAGCATAATCCCATA
ACCAAAGACATCAGTTTTCTCTGAAGATTTTCCAGTAGAAAGGTATTCTG
GAGCTATATGCCCAATGGTGCCACGGACTGCCGTAGTGACATGGGTATCC
TTGTAGTCCATAAGTTTAGCCAACCCAAAGTCCCCAACAACAGCTTCAAA
CTCCTCATCCAACAAAATGTTAGCCGCTTTCACATCACGGTGAATGATCT
TTGGATCACCATGATCCTGCAAATAC
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