CF835041

Overview
NameCF835041
Unique NameCF835041
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length670
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: PPIB_CRYNE (Peptidyl-prolyl cis-trans isomerase B OS=Cryptococcus neoformans GN=CPR2 PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.181e-33
Identity = 71/118 (60.17%), Postives = 84/118 (71.19%), Query Frame = -3
Query:  264 YKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSG-RTNKPVVIADCGQL 614
            Y+GSSFHR+I  FM Q           G+SIYGSKF DENF  KHTGPG+LSM NAG  TNGSQFF+CT KT WLD +HVVFG V+EGMDVV A+E V +S G +  +P+ IA  G+L
Sbjct:   95 YEGSSFHRIIKNFMIQGGDFTKGDGTGGKSIYGSKFPDENFKLKHTGPGVLSMANAGRDTNGSQFFICTVKTAWLDNRHVVFGHVLEGMDVVYAMENVKTSRGDKPVEPITIAASGEL 212          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: PPIE_DROME (Peptidyl-prolyl cis-trans isomerase E OS=Drosophila melanogaster GN=cyp33 PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 5.460e-33
Identity = 67/117 (57.26%), Postives = 80/117 (68.38%), Query Frame = -3
Query:  264 YKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 614
            YKG SFHRVIP FMCQ           G+SIYG KF DENF  KH   G LSM N+G  TNGSQFF+CT KT+WLD KHVVFG V+ G +VV+ +E+ GS SG  ++ +VI  CG+L
Sbjct:  183 YKGCSFHRVIPEFMCQGGDFTNNNGTGGKSIYGKKFNDENFNLKHNSFGTLSMANSGANTNGSQFFICTTKTDWLDNKHVVFGHVISGAEVVRKMERCGSKSGTPSQKIVIYSCGEL 299          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: PPID_MOUSE (40 kDa peptidyl-prolyl cis-trans isomerase OS=Mus musculus GN=Ppid PE=1 SV=3)

HSP 1 Score: 140.969 bits (354), Expect = 5.460e-33
Identity = 72/131 (54.96%), Postives = 87/131 (66.41%), Query Frame = -3
Query:  264 GEKGIGNS-GKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 653
            GEKG G++ GKPLH+KG  FHR+I  FM Q           GESIYG KF DENF  KH   G+LSM NAGP TNGSQFF+ T  T  LDGKHVVFGQV++G+ V + +E V  +  +  K  VIA+CG+L
Sbjct:   54 GEKGTGSTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGQVIKGLGVARTLENVEVNGEKPAKLCVIAECGEL 184          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: PPID_BOVIN (40 kDa peptidyl-prolyl cis-trans isomerase OS=Bos taurus GN=PPID PE=1 SV=6)

HSP 1 Score: 140.969 bits (354), Expect = 5.460e-33
Identity = 74/131 (56.49%), Postives = 85/131 (64.89%), Query Frame = -3
Query:  264 GEKGIG-NSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 653
            GEKGIG  +GKPLH+KG  FHR+I  FM Q           GESIYG KF DENF  KH   G+LSM NAG  TNGSQFF+ T  T  LDGKHVVFGQV++GM V K +E V     +  K  VIA+CG+L
Sbjct:   54 GEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAKILENVEVKGEKPAKLCVIAECGEL 184          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: PPIB2_RHIOR (Peptidyl-prolyl cis-trans isomerase B2 OS=Rhizopus oryzae GN=cyp9 PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 5.460e-33
Identity = 76/134 (56.72%), Postives = 89/134 (66.42%), Query Frame = -3
Query:  261 APGEKGIGNSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSS-SGRTNKPVVIADCGQLS 659
            A G+ G G       YKGS+FHRVI  FM Q           G+SIYGS+F DENF  +HT PG+LSM NAGP +NGSQFF+ T  T WLDGKHVVFG+V+EGMDVV  IEK  ++   + N  VVIADCG LS
Sbjct:   70 ATGQNGYG-------YKGSTFHRVIDQFMIQGGDFTNHDGTGGKSIYGSRFPDENFKLRHTVPGLLSMANAGPDSNGSQFFITTVVTSWLDGKHVVFGKVLEGMDVVTKIEKTPTNYRSKPNVDVVIADCGLLS 196          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: PPID_RAT (40 kDa peptidyl-prolyl cis-trans isomerase OS=Rattus norvegicus GN=Ppid PE=1 SV=3)

HSP 1 Score: 140.198 bits (352), Expect = 9.314e-33
Identity = 72/131 (54.96%), Postives = 86/131 (65.65%), Query Frame = -3
Query:  264 GEKGIG-NSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 653
            GEKG G  +GKPLH+KG  FHR+I  FM Q           GESIYG KF DENF  KH   G+LSM NAGP TNGSQFF+ T  T  LDGKHVVFGQV++G+ V + +E V  +  +  K  VIA+CG+L
Sbjct:   54 GEKGTGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGQVIKGLGVARMLENVEVNGEKPAKLCVIAECGEL 184          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: PPIH_NEUCR (Peptidyl-prolyl cis-trans isomerase H OS=Neurospora crassa GN=cyp-3 PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.710e-32
Identity = 71/128 (55.47%), Postives = 85/128 (66.41%), Query Frame = -3
Query:  264 NSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSK-FADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP---VVIADCGQL 635
            N G+P  YKGS FHR+IP FMCQ              IYG+K FADENF+ KH  PG+LSM NAGP TNGSQFF+ T  T +LDGKHVVFG+VV+GMDVVK +E   +     + P   VVIA CG++
Sbjct:   55 NLGRPQGYKGSKFHRIIPNFMCQGGDFLNGDGTGSTCIYGTKSFADENFLLKHDTPGLLSMANAGPNTNGSQFFITTVPTPFLDGKHVVFGKVVDGMDVVKKMENTKTGYRGKDVPNLDVVIAQCGEM 182          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: CYPH_ENCCU (Peptidyl-prolyl cis-trans isomerase OS=Encephalitozoon cuniculi GN=CPR1 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.710e-32
Identity = 72/119 (60.50%), Postives = 79/119 (66.39%), Query Frame = -3
Query:  264 YKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNK--PVVIADCGQL 614
            YKGS+FHR+IPGFM Q           G SIYG KF DENF  KHT  GILSM N G  TNGSQFF+   KT+WLD KHVVFG+VVEGMDVV  I K GS SG+  K   + I DCG L
Sbjct:   51 YKGSTFHRIIPGFMVQGGDYTAHNGTGGRSIYGEKFPDENFELKHTKEGILSMANCGAHTNGSQFFITLGKTQWLDEKHVVFGEVVEGMDVVHKIAKYGSESGQVKKGYRIEIRDCGVL 169          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: PPID_HUMAN (40 kDa peptidyl-prolyl cis-trans isomerase OS=Homo sapiens GN=PPID PE=1 SV=3)

HSP 1 Score: 138.272 bits (347), Expect = 3.539e-32
Identity = 72/131 (54.96%), Postives = 86/131 (65.65%), Query Frame = -3
Query:  264 GEKGIGNS-GKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 653
            GEKGIG++ GKPLH+KG  FHR+I  FM Q           GESIYG KF DENF  KH   G+LSM NAG  TNGSQFF+ T  T  LDGKHVVFGQV++G+ V + +E V     +  K  VIA+CG+L
Sbjct:   54 GEKGIGHTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSMANAGRNTNGSQFFITTVPTPHLDGKHVVFGQVIKGIGVARILENVEVKGEKPAKLCVIAECGEL 184          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: PPIB_RAT (Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus GN=Ppib PE=2 SV=3)

HSP 1 Score: 136.732 bits (343), Expect = 1.030e-31
Identity = 72/133 (54.14%), Postives = 85/133 (63.91%), Query Frame = -3
Query:  264 APGEKGIGNSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSS-GRTNKPVVIADCGQL 659
            A GEKG G       YK S FHRVI  FM Q           G+SIYG +F DENF  KH GPG +SM NAG  TNGSQFF+ T KT WLDGKHVVFG+V+EGMDVV+ +E   + S  +  K V+I DCG++
Sbjct:   80 ATGEKGFG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKVENTKTDSRDKPLKDVIIVDCGKI 205          
The following BLAST results are available for this feature:
BLAST of CF835041 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 205
Match NameE-valueIdentityDescription
PPIB_CRYNE4.181e-3360.17Peptidyl-prolyl cis-trans isomerase B OS=Cryptococ... [more]
PPIE_DROME5.460e-3357.26Peptidyl-prolyl cis-trans isomerase E OS=Drosophil... [more]
PPID_MOUSE5.460e-3354.9640 kDa peptidyl-prolyl cis-trans isomerase OS=Mus ... [more]
PPID_BOVIN5.460e-3356.4940 kDa peptidyl-prolyl cis-trans isomerase OS=Bos ... [more]
PPIB2_RHIOR5.460e-3356.72Peptidyl-prolyl cis-trans isomerase B2 OS=Rhizopus... [more]
PPID_RAT9.314e-3354.9640 kDa peptidyl-prolyl cis-trans isomerase OS=Ratt... [more]
PPIH_NEUCR2.710e-3255.47Peptidyl-prolyl cis-trans isomerase H OS=Neurospor... [more]
CYPH_ENCCU2.710e-3260.50Peptidyl-prolyl cis-trans isomerase OS=Encephalito... [more]
PPID_HUMAN3.539e-3254.9640 kDa peptidyl-prolyl cis-trans isomerase OS=Homo... [more]
PPIB_RAT1.030e-3154.14Peptidyl-prolyl cis-trans isomerase B OS=Rattus no... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06J06_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06J06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835041 ID=CF835041; Name=CF835041; organism=Citrus sinensis; type=EST; length=670bp
TTTTTTTTTTTTTTTTTACAAGACACAGCCCTATCTTATTTAAAACCGTG
TTAGCTCATAGAAAGACATAAAAAACAGGTTCATCAAGAACCACCACCCG
GAGACCCCGATCCAACCCGAACAAGTAACATAGCAGGGAAAATTAGATAA
AGATTAAAAGTCCTACAGACACGGCCACATAATAATAGATAACATAATCA
CCATCACGATCGCGATCAGACGGCTCGTGATGATGGCGATCATTATCATG
ATCAAATCTAAGACAATTGACCGCAATCAGCGATCACGACGGGCTTGTTG
GTCCTTCCGGAGCTGGACCCCACTTTCTCGATGGCCTTGACGACGTCCAT
TCCTTCGACGACTTGACCGAACACAACGTGCTTCCCATCGAGCCACTCGG
TCTTGGCCGTACAGACGAAGAACTGAGATCCGTTGGTTCCGGGTCCGGCA
TTCCCCATGGAGAGGATTCCGGGGCCGGTGTGCTTCTTCACGAAGTTCTC
ATCGGCGAATTTTGAGCCGTAGATTGATTCGCCTCCGGTTCCGTTTCCGG
CGGTGAAGTCTCCCCCCTGGCACATGAATCCGGGGATCACACGGTGGAAG
GACGAGCCCTTGTAGTGGAGTGGCTTGCCGGAATTGCCGATGCCTTTCTC
GCCCGGTGCAGAGGGCGCGG
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