CF835057

Overview
NameCF835057
Unique NameCF835057
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3768 contig Csv1_Contig3768:682..1432. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835057 vs. ExPASy Swiss-Prot
Match: EA6_ARATH (Probable glucan endo-1,3-beta-glucosidase A6 OS=Arabidopsis thaliana GN=A6 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.397e-32
Identity = 78/252 (30.95%), Postives = 125/252 (49.60%), Query Frame = 1
Query:    4 FRSLSDPRPETLAFCLL*PNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDGEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSM--AGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGISKSSQXXXXXXXXXXXXXXXXXXXXXXXXGWCVPKAGISDAQLQASLDYACSQ-GIDCSPIQPGGACFEPNTVASHAAFAMNLYYQTSAKNPWNCDFLKTATLTSQNP 750
            FR   +P   +L F L   ++   D  TG+ Y N+ D  +D+V  A+  +G+    + ++ETGWP  GD +E G ++ NA  YN NLI  + +    GTP  PG  + T++F+L++E+ K G   +R +G+  PD S  YDV  +  +                          WCVP  G ++ +L+ +L  AC+Q    C+ + PG  C+EP ++  HA++A+N Y+         C F   A  T+ NP
Sbjct:  220 FRWSRNPMNTSLDFALFQGHSTYTDPQTGLVYRNLLDQMLDSVLFAMTKLGYPHMRLAISETGWPNFGDIDETGANILNAATYNRNLIKKMSASPPIGTPSRPGLPIPTFVFSLFNENQKSGSGTQRHWGILHPDGSPIYDVDFTGQTPLTGFNPLPKPTNNVPYKGQV-----WCVPVEGANETELEETLRMACAQSNTTCAALAPGRECYEPVSIYWHASYALNSYWAQFRNQSIQCFFNGLAHETTTNP 466          
BLAST of CF835057 vs. ExPASy Swiss-Prot
Match: E1310_ARATH (Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis thaliana GN=At5g42100 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.847e-30
Identity = 69/144 (47.92%), Postives = 94/144 (65.28%), Query Frame = 1
Query:   19 DPRPETLAFCLL*PNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMG--FKDGEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMA-GTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGISKSS 441
            +P+  +L F L  PN G  D G+   Y NM  AQVDAV+ AL+A+G  +K   IVV+ETGWP  GDP EVG + +NA+ YNGNLI  + S    TP+ P   +  ++FAL++E++KPGP  ER++GLF PD +  Y +GI  SS
Sbjct:  209 NPKHVSLDFVLFQPNQGFTDPGSNFHYDNMLFAQVDAVYHALDAVGISYKKVPIVVSETGWPSNGDPQEVGATCDNARKYNGNLIKMMMSKKMRTPIRPECDLTIFVFALFNENMKPGPTSERNYGLFNPDGTPVYSLGIKTSS 352          
BLAST of CF835057 vs. ExPASy Swiss-Prot
Match: E13F_HORVU (Putative glucan endo-1,3-beta-glucosidase GVI (Fragment) OS=Hordeum vulgare PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.881e-25
Identity = 65/147 (44.22%), Postives = 92/147 (62.59%), Query Frame = 1
Query:    4 FRSLSDPRPETLAFCLL*PNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDG-EIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGISKSS 441
            F   +DP    L + LL  +A    +  G++Y NMFDA +DAV++A+   G  +  E+VV+ETGWP  G     G SVENA AY  NL+ H+    GTP  PGK+V+TYIFA+++E+ KP    E++FG+F+PD+S  Y V  + SS
Sbjct:  180 FAYSADPSSVRLDYALLSSSAAVAVTDNGVEYANMFDAILDAVYAAVEKAGGGESLELVVSETGWPSGG--GGYGASVENAAAYINNLVRHV---GGTPRRPGKAVETYIFAMFNENQKP-EGVEQNFGMFQPDMSQVYHVDFTASS 320          
BLAST of CF835057 vs. ExPASy Swiss-Prot
Match: E13A_ARATH (Glucan endo-1,3-beta-glucosidase, acidic isoform OS=Arabidopsis thaliana GN=BG2 PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 1.978e-24
Identity = 58/120 (48.33%), Postives = 81/120 (67.50%), Query Frame = 1
Query:   73 VDSGTGIKYMNMFDAQVDAVHSALNAMGFKDGEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGIS 432
            VD+  G  Y N+FDA +D+V++AL   G    EIVV+ETGWP  G    VG SVENAK Y  NLI H+++  G+P  PGK+++TYIFA++DE+ K  P +E+ +GLF PD  + Y+V  +
Sbjct:  226 VDNDPGYSYQNLFDANLDSVYAALEKSGGGSLEIVVSETGWPTEG---AVGTSVENAKTYVNNLIQHVKN--GSPRRPGKAIETYIFAMFDEN-KKEPTYEKFWGLFHPDRQSKYEVNFN 339          
BLAST of CF835057 vs. ExPASy Swiss-Prot
Match: E13E_HORVU (Glucan endo-1,3-beta-glucosidase GV OS=Hordeum vulgare PE=2 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 8.312e-23
Identity = 57/127 (44.88%), Postives = 81/127 (63.78%), Query Frame = 1
Query:   37 LAFCLL*PNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDGEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAY 417
            L +  L P     D+G G+ Y ++FDA VD++++AL   G  +  +VV+E+GWP  G     G SVENA+ YN  LI H+RS  GTP  PG +++TYIFA+++E+ KPG   ER+FGLF P+    Y
Sbjct:  190 LNYATLQPGTTVRDNGNGLTYTSLFDAMVDSIYAALEKAGTPNVRVVVSESGWPSAGG---FGASVENARNYNQGLIDHIRS--GTPKRPG-AIETYIFAMFNENRKPGDEVERNFGLFFPNKQPVY 310          
BLAST of CF835057 vs. ExPASy Swiss-Prot
Match: E138_ARATH (Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis thaliana GN=At1g64760 PE=1 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.086e-22
Identity = 77/226 (34.07%), Postives = 113/226 (50.00%), Query Frame = 1
Query:   88 GIKYMNMFDAQVDAVHSALNAMGFKDGEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLK---PGPAFERSFGLFKPDLSAAYDVGISKSSQXXXXXXXXXXXXXXXXXXXXXXXXGWCVPKAGISD-AQLQASLDYACSQGIDCSPIQPGGACFEPNTVAS--HAAFAMNLYYQTSAKNPWNCDFLKTATLTSQN 747
            GI Y N+FDA  D + S+L A+G  D  I+V E GWP  GD +    S    + YNG L+  L +  GTPL P   ++ Y+F L DED K   PGP FER +G+FK D    + + +S   Q                         WC       D  +L A++DYAC+   DC+ +  G +C   NT+ +  +A++A N+++Q   ++   C F   AT+T+QN
Sbjct:  233 GIDYTNVFDANFDTLVSSLKAVGHGDMPIIVGEVGWPTEGDKHANAGSA--YRFYNG-LLPRLGTNKGTPLRP-TYIEVYLFGLLDEDAKSIAPGP-FERHWGIFKFDGQPKFPIDLSGQGQSKFLIGAQNVPYLPNK---------WCTFNPEAKDLTKLAANIDYACTFS-DCTALGYGSSC---NTLDANGNASYAFNMFFQVKNQDESACYFQGLATITTQN 440          
BLAST of CF835057 vs. ExPASy Swiss-Prot
Match: E13I_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform PR-N (Fragment) OS=Nicotiana tabacum GN=PRN PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.418e-22
Identity = 49/112 (43.75%), Postives = 76/112 (67.86%), Query Frame = 1
Query:   97 YMNMFDAQVDAVHSALNAMGFKDGEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGIS 432
            Y N+FDA +D+++ A+   G ++ EI+V+E+GWP  G+      ++ENA+ Y  NLI H++S AGTP  PGK+++TY+FA++DE+ K G   E+ FGLF PD  A Y +  +
Sbjct:  167 YQNLFDALLDSMYFAVEKAGGQNVEIIVSESGWPSEGNS---AATIENAQTYYENLINHVKSGAGTPKKPGKAIETYLFAMFDENNKEGDITEKHFGLFSPDQRAKYQLNFN 275          
BLAST of CF835057 vs. ExPASy Swiss-Prot
Match: E13G_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform GI9 OS=Nicotiana tabacum GN=PR2 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.418e-22
Identity = 49/112 (43.75%), Postives = 76/112 (67.86%), Query Frame = 1
Query:   97 YMNMFDAQVDAVHSALNAMGFKDGEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGIS 432
            Y N+FDA +D+++ A+   G ++ EI+V+E+GWP  G+      ++ENA+ Y  NLI H++S AGTP  PGK+++TY+FA++DE+ K G   E+ FGLF PD  A Y +  +
Sbjct:  235 YQNLFDALLDSMYFAVEKAGGQNVEIIVSESGWPSEGNS---AATIENAQTYYENLINHVKSGAGTPKKPGKAIETYLFAMFDENNKEGDITEKHFGLFSPDQRAKYQLNFN 343          
BLAST of CF835057 vs. ExPASy Swiss-Prot
Match: E13L_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform GL153 OS=Nicotiana tabacum GN=GGL4 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.159e-22
Identity = 49/112 (43.75%), Postives = 75/112 (66.96%), Query Frame = 1
Query:   97 YMNMFDAQVDAVHSALNAMGFKDGEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGIS 432
            Y N+FDA +D+++ A+   G  + EI+V+E+GWP  G+      ++ENA+ Y  NLI H++  AGTP  PGKS++TY+FA++DE++K G   E+ FGLF PD  A Y +  +
Sbjct:  235 YQNLFDAILDSMYFAVEKAGGPNVEIIVSESGWPSEGNS---AATIENAQTYYRNLIDHVKRGAGTPKKPGKSIETYLFAMFDENVKKGEITEKHFGLFSPDQRAKYQLNFN 343          
BLAST of CF835057 vs. ExPASy Swiss-Prot
Match: E13A_SOLLC (Glucan endo-1,3-beta-glucosidase A OS=Solanum lycopersicum PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.125e-22
Identity = 49/109 (44.95%), Postives = 74/109 (67.89%), Query Frame = 1
Query:   97 YMNMFDAQVDAVHSALNAMGFKDGEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDV 423
            Y N+FDA VD+++ A   +G ++ EI+V+E+GWP  G P+    ++ENA  Y  NLI H++  AGTP  PG++++TY+FA++DE+ K G   E+ FGLFKPD    Y +
Sbjct:  228 YQNLFDALVDSMYFATEKLGGQNIEIIVSESGWPSEGHPSA---TLENAMTYYTNLINHVKGGAGTPKKPGRTIETYLFAMFDENRKDGKPSEQHFGLFKPDQRPKYQL 333          
The following BLAST results are available for this feature:
BLAST of CF835057 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
EA6_ARATH4.397e-3230.95Probable glucan endo-1,3-beta-glucosidase A6 OS=Ar... [more]
E1310_ARATH1.847e-3047.92Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis... [more]
E13F_HORVU8.881e-2544.22Putative glucan endo-1,3-beta-glucosidase GVI (Fra... [more]
E13A_ARATH1.978e-2448.33Glucan endo-1,3-beta-glucosidase, acidic isoform O... [more]
E13E_HORVU8.312e-2344.88Glucan endo-1,3-beta-glucosidase GV OS=Hordeum vul... [more]
E138_ARATH1.086e-2234.07Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis ... [more]
E13I_TOBAC2.418e-2243.75Glucan endo-1,3-beta-glucosidase, acidic isoform P... [more]
E13G_TOBAC2.418e-2243.75Glucan endo-1,3-beta-glucosidase, acidic isoform G... [more]
E13L_TOBAC3.159e-2243.75Glucan endo-1,3-beta-glucosidase, acidic isoform G... [more]
E13A_SOLLC4.125e-2244.95Glucan endo-1,3-beta-glucosidase A OS=Solanum lyco... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06J15_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06J15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835057 ID=CF835057; Name=CF835057; organism=Citrus sinensis; type=EST; length=751bp
GTTTTTCGCTCCCTAAGCGACCCGAGACCCGAGACTCTTGCCTTCTGTTT
GCTTTAACCCAACGCGGGACGAGTTGACTCCGGGACCGGGATCAAGTACA
TGAACATGTTCGACGCCCAGGTTGATGCCGTACATTCAGCCTTGAATGCA
ATGGGGTTCAAGGATGGGGAGATTGTGGTTGCAGAGACAGGGTGGCCTTA
CCGCGGAGACCCGAATGAGGTTGGACCTAGTGTTGAGAATGCCAAGGCCT
ATAACGGGAACTTGATTGCTCACCTTAGATCAATGGCTGGAACTCCATTG
ATGCCTGGAAAATCTGTGGATACATATATTTTTGCTCTCTATGATGAGGA
CTTGAAGCCTGGCCCTGCCTTTGAACGTTCATTTGGGCTCTTCAAGCCAG
ACCTTTCAGCAGCATATGATGTTGGTATTTCAAAGAGTAGCCAGACTCCA
TCAGCTCCAGTGACTCCATCAACTCCAAAAACTCCAACGACTCCATCACC
AAAACCAACAGCAGCTGGTTGGTGTGTGCCCAAGGCCGGCATCTCCGATG
CACAACTGCAGGCAAGTCTTGACTATGCCTGCAGCCAAGGCATCGATTGC
AGTCCTATCCAGCCAGGAGGTGCCTGTTTCGAACCAAATACAGTAGCATC
ACATGCTGCTTTTGCCATGAATCTCTACTATCAGACTTCTGCAAAAAATC
CATGGAACTGCGACTTTCTCAAAACGGCAACTCTCACATCCCAAAATCCC
A
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