CF835057

Overview
NameCF835057
Unique NameCF835057
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3768 contig Csv1_Contig3768:682..1432. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835057 vs. ExPASy Swiss-Prot
Match: E13K_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform GL161 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.568e-21
Identity = 49/112 (43.75%), Postives = 74/112 (66.07%), Query Frame = 1
Query:   97 YMNMFDAQVDAVHSALNAMGFKDGEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGIS 432
            Y N+FDA +D+++ A+   G  + EI+V+E+GWP  G       ++ENA+ Y  NLI H++S AGTP  PGK+++TY+FA++DE+ K G   E+ FGLF PD  A Y +  +
Sbjct:  215 YQNLFDAILDSMYFAVEKAGGPNVEIIVSESGWPSEGSS---AATIENAQTYYRNLINHVKSGAGTPKKPGKTIETYLFAMFDENDKIGEITEKHFGLFSPDQRAKYQLNFN 323          
BLAST of CF835057 vs. ExPASy Swiss-Prot
Match: E13J_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform PR-O (Fragment) OS=Nicotiana tabacum GN=PR0 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.047e-21
Identity = 48/112 (42.86%), Postives = 74/112 (66.07%), Query Frame = 1
Query:   97 YMNMFDAQVDAVHSALNAMGFKDGEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGIS 432
            Y N+FDA +D+++ A+   G  + EI+V+E+GWP  G+      ++ENA+ Y  NLI H++  AGTP  PGK+++TY+FA++DE+ K G   E+ FGLF PD  A Y +  +
Sbjct:   52 YQNLFDALLDSMYFAVEKAGGPNVEIIVSESGWPSEGNS---AATIENAQTYYRNLIDHVKRGAGTPKKPGKTIETYLFAMFDENDKKGEITEKHFGLFSPDQRAKYQLNFN 160          
BLAST of CF835057 vs. ExPASy Swiss-Prot
Match: E136_ARATH (Glucan endo-1,3-beta-glucosidase 6 OS=Arabidopsis thaliana GN=At5g58090 PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 2.047e-21
Identity = 74/235 (31.49%), Postives = 110/235 (46.81%), Query Frame = 1
Query:   61 NAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDGEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLK---PGPAFERSFGLFKPDLSAAYDVGISKSSQXXXXXXXXXXXXXXXXXXXXXXXXGWCV--PKAGISDAQLQASLDYACSQGIDCSPIQPGGACFEPNTVASHAAFAMNLYYQTSAKNPWNCDFLKTATLTSQNP 750
            NA  ++ G G  Y NMFDA  D +  AL   GF +  I++ E GWP  GD N    +++ AK +N   +AH+    GTP  PG  +D Y+F+L DED K   PG  FER +G+F  D    Y + +  ++                          WCV  P   + D Q+  ++ YACS G DC+ +  G +C   +    + ++A N YYQ   +    C F   + +T  +P
Sbjct:  222 NAQPLNDG-GTFYYNMFDANYDTLVHALEKNGFGNMPIIIGEIGWPTDGDSN---ANLDYAKKFNQGFMAHISGGKGTPRRPG-PIDAYLFSLIDEDAKSVQPG-YFERHWGIFTFDGLPKYALNLGTTNTGALIQAKGVRYLERK----------WCVMKPNVRLDDPQVAPAVSYACSLG-DCTSLGVGTSCANLDG-KQNISYAFNSYYQIQDQLDTACKFPNISEVTKTDP 438          
BLAST of CF835057 vs. ExPASy Swiss-Prot
Match: E13C_TOBAC (Glucan endo-1,3-beta-glucosidase OS=Nicotiana tabacum GN=SP41A PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.327e-20
Identity = 47/114 (41.23%), Postives = 74/114 (64.91%), Query Frame = 1
Query:   97 YMNMFDAQVDAVHSALNAMGFKDGEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGISKS 438
            Y N+FDA +D+++ A+   G  + EI+V+E+GWP  G+      ++ENA+ Y  NL+ H++  AGTP  PG+ V+TY+FA++DE+ K G   E+ FGLF P+ +A Y +    S
Sbjct:  239 YQNLFDALLDSIYFAVEKAGGPNVEIIVSESGWPSEGNS---AATIENAQTYYRNLVNHVKGGAGTPKKPGRIVETYLFAMFDENEKNGEVTEKHFGLFYPNRTAKYQLNFMYS 349          
BLAST of CF835057 vs. ExPASy Swiss-Prot
Match: E13D_TOBAC (Glucan endo-1,3-beta-glucosidase OS=Nicotiana tabacum GN=SP41B PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.733e-20
Identity = 46/114 (40.35%), Postives = 74/114 (64.91%), Query Frame = 1
Query:   97 YMNMFDAQVDAVHSALNAMGFKDGEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGISKS 438
            Y N+FDA +D+++ A+   G  + EI+V+E+GWP  G+      ++ENA+ Y  NL+ H++  AGTP  PG+ ++TY+FA++DE+ K G   E+ FGLF P+ +A Y +    S
Sbjct:  239 YQNLFDALLDSIYFAVEKAGGPNVEIIVSESGWPSEGNS---AATIENAQTYYRNLVNHVKGGAGTPKKPGRIIETYLFAMFDENEKQGEITEKHFGLFYPNRAAKYQLNFMYS 349          
BLAST of CF835057 vs. ExPASy Swiss-Prot
Match: E13C_HORVU (Glucan endo-1,3-beta-glucosidase GIII OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.956e-20
Identity = 53/140 (37.86%), Postives = 86/140 (61.43%), Query Frame = 1
Query:    4 FRSLSDPRPETLAFCLL*PNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDGEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDV 423
            F    +PR   L F    P +  V+   G+ Y N+FDA VD++++AL   G    ++V++E+GWP        G + +NA+AYN  LI H+ +  G+P   G ++++YIFA+++E+LK G   E++FGLFKP++S AY +
Sbjct:  196 FAYKGNPRDIQLTFATFVPGSTTVNDN-GLTYTNLFDAMVDSIYAALEKAGTPGVKVVISESGWP---SDQGFGATAQNARAYNQGLINHVGN--GSPKKAG-ALESYIFAMFNENLKDGDELEKNFGLFKPNMSPAYAI 328          
BLAST of CF835057 vs. ExPASy Swiss-Prot
Match: E135_ARATH (Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis thaliana GN=At4g31140 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.586e-20
Identity = 68/223 (30.49%), Postives = 105/223 (47.09%), Query Frame = 1
Query:   97 YMNMFDAQVDAVHSALNAMGFKDGEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLK---PGPAFERSFGLFKPDLSAAYDVGISKSSQXXXXXXXXXXXXXXXXXXXXXXXXGWCV--PKAGISDAQLQASLDYACSQGIDCSPIQPGGACFEPNTVASHAAFAMNLYYQTSAKNPWNCDFLKTATLTSQNP 750
            Y N+ DA  D +  +L   GF +  I+V E GWP  GD N    ++  A+ YN   +   ++  GTP+ PG ++D Y+F L DED K   PG  FER +G+F  D    Y + +   +                          WC+  P A + D QL  S+ YAC    DC+ +  G +C   N +A + ++A N YYQ S +    C F   + +++++P
Sbjct:  238 YDNVLDANYDTLVWSLQKNGFGNLTIIVGEVGWPTDGDKNA---NLMYARRYNQGFMNRQKANKGTPMRPG-AMDAYLFGLIDEDAKSIQPGN-FERHWGIFYIDGQPKYQLSLGSGNGLIPAKDVHYLAKK------------WCILAPNANLQDPQLGPSVSYACDHA-DCTSLGYGSSCGNLN-LAQNVSYAFNSYYQVSNQLDSACKFPGLSIVSTRDP 441          
BLAST of CF835057 vs. ExPASy Swiss-Prot
Match: E13B_HORVU (Glucan endo-1,3-beta-glucosidase GII OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.467e-19
Identity = 56/140 (40.00%), Postives = 80/140 (57.14%), Query Frame = 1
Query:    4 FRSLSDPRPETLAFCLL*PNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDGEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDV 423
            F    +P   +L +    P     D   G+ Y ++FDA VDAV++AL   G    ++VV+E+GWP  G       S  NA+ YN  LI H+    GTP    ++++TYIFA+++E+ K G A ERSFGLF PD S AY++
Sbjct:  199 FAYRDNPGSISLNYATFQPGTTVRDQNNGLTYTSLFDAMVDAVYAALEKAGAPAVKVVVSESGWPSAGG---FAASAGNARTYNQGLINHVGG--GTP-KKREALETYIFAMFNENQKTGDATERSFGLFNPDKSPAYNI 332          
BLAST of CF835057 vs. ExPASy Swiss-Prot
Match: E13D_HORVU (Glucan endo-1,3-beta-glucosidase GIV OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.503e-19
Identity = 56/144 (38.89%), Postives = 81/144 (56.25%), Query Frame = 1
Query:    4 FRSLSDPRPETLAFCLL*PNAGRV-DSGTGIKYMNMFDAQVDAVHSALNAMGFKDGEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGIS 432
            F    +PR   L +    P A  V D+G G+ Y N+F+A VDA+++AL   G     +VV+E+GWP  G       + ENA+AYN  LI H+    GTP  PG  ++ Y+FA+++E+ KPG   ER FGLF P+    Y +  +
Sbjct:  172 FAYSGNPRDIKLNYATFQPGATPVRDAGNGLIYTNLFNAMVDAMYAALEKAGAPSVRVVVSESGWPSAGG---FAATPENARAYNQGLIDHVAH--GTPKKPG-HMEAYVFAMFNENQKPGLETERHFGLFYPNKRPVYHINFA 309          
BLAST of CF835057 vs. ExPASy Swiss-Prot
Match: E13H_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q' OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.622e-18
Identity = 50/119 (42.02%), Postives = 72/119 (60.50%), Query Frame = 1
Query:   76 DSGTGIKYMNMFDAQVDAVHSALNAMGFKDGEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGIS 432
            D+G G  Y N+FDA +DA +SAL        EIVV+E+GWP  G       S++NA+ YN NLI+H++   G+P  P   ++TY+FAL+DED K  P  E+ FGLF  ++   Y +  +
Sbjct:  228 DNGRG--YRNLFDAILDATYSALEKASGSSLEIVVSESGWPSAGAGQLT--SIDNARTYNNNLISHVK--GGSPKRPSGPIETYVFALFDEDQK-DPEIEKHFGLFSANMQPKYQISFN 339          
The following BLAST results are available for this feature:
BLAST of CF835057 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
E13K_TOBAC1.568e-2143.75Glucan endo-1,3-beta-glucosidase, acidic isoform G... [more]
E13J_TOBAC2.047e-2142.86Glucan endo-1,3-beta-glucosidase, acidic isoform P... [more]
E136_ARATH2.047e-2131.49Glucan endo-1,3-beta-glucosidase 6 OS=Arabidopsis ... [more]
E13C_TOBAC1.327e-2041.23Glucan endo-1,3-beta-glucosidase OS=Nicotiana taba... [more]
E13D_TOBAC1.733e-2040.35Glucan endo-1,3-beta-glucosidase OS=Nicotiana taba... [more]
E13C_HORVU2.956e-2037.86Glucan endo-1,3-beta-glucosidase GIII OS=Hordeum v... [more]
E135_ARATH6.586e-2030.49Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis ... [more]
E13B_HORVU1.467e-1940.00Glucan endo-1,3-beta-glucosidase GII OS=Hordeum vu... [more]
E13D_HORVU2.503e-1938.89Glucan endo-1,3-beta-glucosidase GIV OS=Hordeum vu... [more]
E13H_TOBAC1.622e-1842.02Glucan endo-1,3-beta-glucosidase, acidic isoform P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06J15_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06J15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835057 ID=CF835057; Name=CF835057; organism=Citrus sinensis; type=EST; length=751bp
GTTTTTCGCTCCCTAAGCGACCCGAGACCCGAGACTCTTGCCTTCTGTTT
GCTTTAACCCAACGCGGGACGAGTTGACTCCGGGACCGGGATCAAGTACA
TGAACATGTTCGACGCCCAGGTTGATGCCGTACATTCAGCCTTGAATGCA
ATGGGGTTCAAGGATGGGGAGATTGTGGTTGCAGAGACAGGGTGGCCTTA
CCGCGGAGACCCGAATGAGGTTGGACCTAGTGTTGAGAATGCCAAGGCCT
ATAACGGGAACTTGATTGCTCACCTTAGATCAATGGCTGGAACTCCATTG
ATGCCTGGAAAATCTGTGGATACATATATTTTTGCTCTCTATGATGAGGA
CTTGAAGCCTGGCCCTGCCTTTGAACGTTCATTTGGGCTCTTCAAGCCAG
ACCTTTCAGCAGCATATGATGTTGGTATTTCAAAGAGTAGCCAGACTCCA
TCAGCTCCAGTGACTCCATCAACTCCAAAAACTCCAACGACTCCATCACC
AAAACCAACAGCAGCTGGTTGGTGTGTGCCCAAGGCCGGCATCTCCGATG
CACAACTGCAGGCAAGTCTTGACTATGCCTGCAGCCAAGGCATCGATTGC
AGTCCTATCCAGCCAGGAGGTGCCTGTTTCGAACCAAATACAGTAGCATC
ACATGCTGCTTTTGCCATGAATCTCTACTATCAGACTTCTGCAAAAAATC
CATGGAACTGCGACTTTCTCAAAACGGCAACTCTCACATCCCAAAATCCC
A
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