CF835057

Overview
NameCF835057
Unique NameCF835057
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3768 contig Csv1_Contig3768:682..1432. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835057 vs. ExPASy Swiss-Prot
Match: E13B_HEVBR (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Hevea brasiliensis GN=HGN1 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 7.536e-16
Identity = 44/112 (39.29%), Postives = 68/112 (60.71%), Query Frame = 1
Query:   97 YMNMFDAQVDAVHSALNAMGFKDGEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGIS 432
            Y N+FDA +DA++SAL        E+VV+E+GWP  G       + +N + Y  NLI H++   GTP  P ++++TY+FA++DE+ K  P  E+ FGLF P+    Y++  S
Sbjct:  247 YKNLFDATLDALYSALERASGGSLEVVVSESGWPSAG---AFAATFDNGRTYLSNLIQHVK--GGTPKRPNRAIETYLFAMFDEN-KKQPEVEKHFGLFFPNKWQKYNLNFS 352          
BLAST of CF835057 vs. ExPASy Swiss-Prot
Match: E13E_TOBAC (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform GGIB50 OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.842e-16
Identity = 47/115 (40.87%), Postives = 68/115 (59.13%), Query Frame = 1
Query:   94 KYMNMFDAQVDAVHSALNAMGFKDGEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGISKS 438
            +Y N+FDA +D+V++AL   G     IVV+E+GWP  G     G + +NA  Y  NLI H +   G+P  PG  ++TYIFA++DE+ K  P  E+ FGLF P+    Y++    S
Sbjct:  243 QYRNLFDAMLDSVYAALERSGGASVGIVVSESGWPSAG---AFGATYDNAATYLRNLIQHAKE--GSPRKPG-PIETYIFAMFDENNK-NPELEKHFGLFSPNKQPKYNINFGVS 350          
BLAST of CF835057 vs. ExPASy Swiss-Prot
Match: E13B_TOBAC (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Nicotiana tabacum PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 9.842e-16
Identity = 47/115 (40.87%), Postives = 68/115 (59.13%), Query Frame = 1
Query:   94 KYMNMFDAQVDAVHSALNAMGFKDGEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGISKS 438
            +Y N+FDA +D+V++AL   G     IVV+E+GWP  G     G + +NA  Y  NLI H +   G+P  PG  ++TYIFA++DE+ K  P  E+ FGLF P+    Y++    S
Sbjct:  244 QYRNLFDAMLDSVYAALERSGGASVGIVVSESGWPSAG---AFGATYDNAATYLRNLIQHAKE--GSPRKPG-PIETYIFAMFDENNK-NPELEKHFGLFSPNKQPKYNINFGVS 351          
BLAST of CF835057 vs. ExPASy Swiss-Prot
Match: E13F_TOBAC (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform GLB OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.679e-15
Identity = 47/115 (40.87%), Postives = 68/115 (59.13%), Query Frame = 1
Query:   94 KYMNMFDAQVDAVHSALNAMGFKDGEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGISKS 438
            +Y N+FDA +D+V++AL   G     IVV+E+GWP  G     G + +NA  Y  NLI H +   G+P  PG  ++TYIFA++DE+ K  P  E+ FGLF P+    Y++    S
Sbjct:  243 QYRNLFDAMLDSVYAALERSGGASVGIVVSESGWPSAG---AFGATYDNAATYLRNLIQHAKE--GSPRKPG-PIETYIFAMFDENNK-NPELEKHFGLFSPNKQPKYNLNFGVS 350          
BLAST of CF835057 vs. ExPASy Swiss-Prot
Match: E13B_SOLLC (Glucan endo-1,3-beta-glucosidase B OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.679e-15
Identity = 46/117 (39.32%), Postives = 71/117 (60.68%), Query Frame = 1
Query:   94 KYMNMFDAQVDAVHSALNAMGFKDGEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGISKSSQ 444
            +Y N+FDA +D+V++A++  G     IVV+E+GWP  G     G + ENA+ Y  NLI H +   G+P  PG  ++TYIFA++DE+ K  P  E+ FG+F P+    Y++    S +
Sbjct:  235 QYRNLFDAMLDSVYAAMDRTGGGSVGIVVSESGWPSAG---AFGATHENAQTYLRNLIQHAKE--GSPRKPG-PIETYIFAMFDENNK-NPELEKHFGMFSPNKQPKYNLNFGVSER 344          
BLAST of CF835057 vs. ExPASy Swiss-Prot
Match: E131_SOLTU (Glucan endo-1,3-beta-glucosidase, basic isoform 1 (Fragment) OS=Solanum tuberosum GN=GLUB1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.864e-15
Identity = 50/129 (38.76%), Postives = 73/129 (56.59%), Query Frame = 1
Query:   58 PNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDGEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGISKSSQ 444
            PNA   D     +Y N+FDA +D+V++A+   G     IVV+E+GWP  G     G + +NA  Y  NLI H +   G+P  PG  ++TYIFA++DE+ K  P  E+ FGLF P+    Y++    S +
Sbjct:  199 PNAVVQDGSR--QYRNLFDAMLDSVYAAMERTGGGSVGIVVSESGWPSAG---AFGATQDNAATYLRNLIQHAKE--GSPRKPG-PIETYIFAMFDENNK-NPELEKHFGLFSPNKQPKYNLNFGVSER 318          
BLAST of CF835057 vs. ExPASy Swiss-Prot
Match: E133_SOLTU (Glucan endo-1,3-beta-glucosidase, basic isoform 3 (Fragment) OS=Solanum tuberosum GN=GLUB3 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.740e-15
Identity = 46/117 (39.32%), Postives = 69/117 (58.97%), Query Frame = 1
Query:   94 KYMNMFDAQVDAVHSALNAMGFKDGEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGISKSSQ 444
            +Y N+FDA +D+V++A+   G     IVV+E+GWP  G     G + +NA  Y  NLI H +   G+P  PG  ++TYIFA++DE+ K  P  E+ FGLF P+    Y++    S +
Sbjct:  200 QYRNLFDAMLDSVYAAMERTGGGSVGIVVSESGWPSAG---AFGATQDNAATYLRNLIQHAKE--GSPRKPG-PIETYIFAMFDENNK-NPELEKHFGLFSPNKQPKYNLNFGVSER 309          
BLAST of CF835057 vs. ExPASy Swiss-Prot
Match: E13B_PEA (Glucan endo-1,3-beta-glucosidase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.884e-15
Identity = 51/141 (36.17%), Postives = 75/141 (53.19%), Query Frame = 1
Query:    4 FRSLSDPRPETLAFCLL*PNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDGEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVG 426
            F  + +PR  +L + L       V  G    Y N+FDA +D+VH+AL+  G     +VV+E+GWP  G       S +NA+ Y  NLI H+    GTP  P  + + Y+FA++DE+ K  P  E+ FG+F P+    Y  G
Sbjct:  213 FSHIGNPRDISLPYALFTSPGVMVQDGPN-GYQNLFDAMLDSVHAALDNTGIGWVNVVVSESGWPSDGGS---ATSYDNARIYLDNLIRHVGK--GTPRRPW-ATEAYLFAMFDENQK-SPELEKHFGVFYPNKQKKYPFG 345          
BLAST of CF835057 vs. ExPASy Swiss-Prot
Match: E13B_NICPL (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Nicotiana plumbaginifolia GN=GN2 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.884e-15
Identity = 46/115 (40.00%), Postives = 68/115 (59.13%), Query Frame = 1
Query:   94 KYMNMFDAQVDAVHSALNAMGFKDGEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGISKS 438
            +Y N+FDA +D+V++AL   G     IVV+E+GWP  G     G + +NA  Y  NLI H +   G+P  P + ++TYIFA++DE+ K  P  E+ FGLF P+    Y++    S
Sbjct:  243 QYRNLFDAMLDSVYAALERSGGASVGIVVSESGWPSAG---AFGATYDNAATYLKNLIQHAKE--GSPRKP-RPIETYIFAMFDENNK-NPELEKHFGLFSPNKQPKYNLNFGVS 350          
BLAST of CF835057 vs. ExPASy Swiss-Prot
Match: E132_SOLTU (Glucan endo-1,3-beta-glucosidase, basic isoform 2 OS=Solanum tuberosum GN=GLUB2 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.379e-15
Identity = 46/117 (39.32%), Postives = 68/117 (58.12%), Query Frame = 1
Query:   94 KYMNMFDAQVDAVHSALNAMGFKDGEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGISKSSQ 444
            +Y N+FDA +D+V++A+   G     IVV+E GWP  G     G + +NA  Y  NLI H +   G+P  PG  ++TYIFA++DE+ K  P  E+ FGLF P+    Y++    S +
Sbjct:  235 QYRNLFDAMLDSVYAAMERTGGGSVGIVVSECGWPSAG---AFGATQDNAATYLRNLIQHAKE--GSPRKPG-PIETYIFAMFDENNK-NPELEKHFGLFSPNKQPKYNLNFGVSER 344          
The following BLAST results are available for this feature:
BLAST of CF835057 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
E13B_HEVBR7.536e-1639.29Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E13E_TOBAC9.842e-1640.87Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E13B_TOBAC9.842e-1640.87Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E13F_TOBAC1.679e-1540.87Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E13B_SOLLC1.679e-1539.32Glucan endo-1,3-beta-glucosidase B OS=Solanum lyco... [more]
E131_SOLTU2.864e-1538.76Glucan endo-1,3-beta-glucosidase, basic isoform 1 ... [more]
E133_SOLTU3.740e-1539.32Glucan endo-1,3-beta-glucosidase, basic isoform 3 ... [more]
E13B_PEA4.884e-1536.17Glucan endo-1,3-beta-glucosidase OS=Pisum sativum ... [more]
E13B_NICPL4.884e-1540.00Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E132_SOLTU6.379e-1539.32Glucan endo-1,3-beta-glucosidase, basic isoform 2 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06J15_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06J15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835057 ID=CF835057; Name=CF835057; organism=Citrus sinensis; type=EST; length=751bp
GTTTTTCGCTCCCTAAGCGACCCGAGACCCGAGACTCTTGCCTTCTGTTT
GCTTTAACCCAACGCGGGACGAGTTGACTCCGGGACCGGGATCAAGTACA
TGAACATGTTCGACGCCCAGGTTGATGCCGTACATTCAGCCTTGAATGCA
ATGGGGTTCAAGGATGGGGAGATTGTGGTTGCAGAGACAGGGTGGCCTTA
CCGCGGAGACCCGAATGAGGTTGGACCTAGTGTTGAGAATGCCAAGGCCT
ATAACGGGAACTTGATTGCTCACCTTAGATCAATGGCTGGAACTCCATTG
ATGCCTGGAAAATCTGTGGATACATATATTTTTGCTCTCTATGATGAGGA
CTTGAAGCCTGGCCCTGCCTTTGAACGTTCATTTGGGCTCTTCAAGCCAG
ACCTTTCAGCAGCATATGATGTTGGTATTTCAAAGAGTAGCCAGACTCCA
TCAGCTCCAGTGACTCCATCAACTCCAAAAACTCCAACGACTCCATCACC
AAAACCAACAGCAGCTGGTTGGTGTGTGCCCAAGGCCGGCATCTCCGATG
CACAACTGCAGGCAAGTCTTGACTATGCCTGCAGCCAAGGCATCGATTGC
AGTCCTATCCAGCCAGGAGGTGCCTGTTTCGAACCAAATACAGTAGCATC
ACATGCTGCTTTTGCCATGAATCTCTACTATCAGACTTCTGCAAAAAATC
CATGGAACTGCGACTTTCTCAAAACGGCAACTCTCACATCCCAAAATCCC
A
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