CF835059
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835059 vs. ExPASy Swiss-Prot
Match: RS27A_NEUCR (40S ribosomal protein S27a OS=Neurospora crassa GN=ubi-3 PE=3 SV=3) HSP 1 Score: 83.5741 bits (205), Expect = 1.044e-15 Identity = 35/54 (64.81%), Postives = 44/54 (81.48%), Query Frame = 3 Query: 333 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 494 LAVL++YKVD GK++RLR+ECPN CGAG FMA DR YCG+C LTYV++K+ Sbjct: 24 LAVLKYYKVDSDGKIERLRRECPNETCGAGVFMAAMQDRQYCGRCHLTYVFEKS 77
BLAST of CF835059 vs. ExPASy Swiss-Prot
Match: RUB1_YEAST (NEDD8-like protein RUB1 OS=Saccharomyces cerevisiae GN=RUB1 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.781e-15 Identity = 39/72 (54.17%), Postives = 55/72 (76.39%), Query Frame = 3 Query: 48 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 263 VKTLTGK I++E++ SD + ++K +++KEGIPP QQRLIF GKQ++D T+ D ++ + LHLVL LRGG Sbjct: 5 VKTLTGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTDAHLVEGMQLHLVLTLRGG 76
BLAST of CF835059 vs. ExPASy Swiss-Prot
Match: RS27A_KLULA (40S ribosomal protein S27a OS=Kluyveromyces lactis GN=ubi3 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.386e-14 Identity = 36/53 (67.92%), Postives = 40/53 (75.47%), Query Frame = 3 Query: 333 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQK 491 LAVL +YKVDD GKV +LRKECPN CG G F+ANH DR YCGKC T+ QK Sbjct: 24 LAVLNYYKVDDEGKVAKLRKECPN--CGPGIFLANHGDRFYCGKCHSTFATQK 74
BLAST of CF835059 vs. ExPASy Swiss-Prot
Match: RS27A_PLUXY (40S ribosomal protein S27a OS=Plutella xylostella PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.772e-14 Identity = 33/52 (63.46%), Postives = 42/52 (80.77%), Query Frame = 3 Query: 333 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQ 488 LAVL+FYKVD++GK+ RLR+EC + +CGAG FMA DRHYCGKC T V++ Sbjct: 24 LAVLRFYKVDENGKIHRLRRECTSEQCGAGVFMAVMEDRHYCGKCHRTMVFK 75
BLAST of CF835059 vs. ExPASy Swiss-Prot
Match: RS27A_SPOFR (40S ribosomal protein S27a OS=Spodoptera frugiperda PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.276e-13 Identity = 33/52 (63.46%), Postives = 41/52 (78.85%), Query Frame = 3 Query: 333 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQ 488 LAVL+FYKVD++GK+ RLR+EC +CGAG FMA DRHYCGKC T V++ Sbjct: 24 LAVLRFYKVDENGKIHRLRRECTGEQCGAGVFMAVMEDRHYCGKCHSTMVFK 75
BLAST of CF835059 vs. ExPASy Swiss-Prot
Match: RS27A_MANSE (40S ribosomal protein S27a OS=Manduca sexta PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.276e-13 Identity = 33/52 (63.46%), Postives = 41/52 (78.85%), Query Frame = 3 Query: 333 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQ 488 LAVL+FYKVD++GK+ RLR+EC +CGAG FMA DRHYCGKC T V++ Sbjct: 24 LAVLRFYKVDENGKIHRLRRECTGEQCGAGVFMAVMEDRHYCGKCHSTMVFK 75
BLAST of CF835059 vs. ExPASy Swiss-Prot
Match: RS27B_SCHPO (40S ribosomal protein S27b OS=Schizosaccharomyces pombe GN=ubi5 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.713e-13 Identity = 34/48 (70.83%), Postives = 40/48 (83.33%), Query Frame = 3 Query: 333 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLT 476 LAVL++YKV+D G V+RLR+ECPN CGA TFMANH DR YCG+C LT Sbjct: 24 LAVLKYYKVEDDGSVKRLRRECPN--CGASTFMANHKDRLYCGRCHLT 69
BLAST of CF835059 vs. ExPASy Swiss-Prot
Match: RS27A_SCHPO (40S ribosomal protein S27a OS=Schizosaccharomyces pombe GN=ubi3 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.713e-13 Identity = 34/48 (70.83%), Postives = 40/48 (83.33%), Query Frame = 3 Query: 333 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLT 476 LAVL++YKV+D G V+RLR+ECPN CGA TFMANH DR YCG+C LT Sbjct: 24 LAVLKYYKVEDDGSVKRLRRECPN--CGASTFMANHKDRLYCGRCHLT 69
BLAST of CF835059 vs. ExPASy Swiss-Prot
Match: RS27A_CAEBR (40S ribosomal protein S27a OS=Caenorhabditis briggsae GN=ubl-1 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.850e-13 Identity = 32/54 (59.26%), Postives = 39/54 (72.22%), Query Frame = 3 Query: 333 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 494 LAVL++YKVD++GK+ RLRKEC CG G FMA H +RHYCG+C T V A Sbjct: 24 LAVLKYYKVDENGKITRLRKECQQPSCGGGVFMAQHANRHYCGRCHDTLVVDTA 77
BLAST of CF835059 vs. ExPASy Swiss-Prot
Match: RS27A_CAEEL (40S ribosomal protein S27a OS=Caenorhabditis elegans GN=ubl-1 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.334e-13 Identity = 31/54 (57.41%), Postives = 39/54 (72.22%), Query Frame = 3 Query: 333 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 494 LAVL++YK+D++GK+ RLRKEC CG G FMA H +RHYCG+C T V A Sbjct: 24 LAVLKYYKIDENGKITRLRKECQQPSCGGGVFMAQHANRHYCGRCHDTLVVDTA 77 The following BLAST results are available for this feature:
BLAST of CF835059 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 123
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835059 ID=CF835059; Name=CF835059; organism=Citrus sinensis; type=EST; length=672bpback to top |