CF835063
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835063 vs. ExPASy Swiss-Prot
Match: UB2L3_MOUSE (Ubiquitin-conjugating enzyme E2 L3 OS=Mus musculus GN=Ube2l3 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.315e-17 Identity = 40/143 (27.97%), Postives = 79/143 (55.24%), Query Frame = 1 Query: 193 RKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ-NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQ 618 RK M++F+ +Q D + N++ W +I PD+ P+D G F++ + F +YP KPP + F ++++HPNI G +CL ++ W P ++ S+ +L+ DP P P ++ A +S++++++ + E ++ Sbjct: 15 RKCGMKNFRNIQVD----------EANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKK 146
BLAST of CF835063 vs. ExPASy Swiss-Prot
Match: UB2L3_HUMAN (Ubiquitin-conjugating enzyme E2 L3 OS=Homo sapiens GN=UBE2L3 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.315e-17 Identity = 40/143 (27.97%), Postives = 79/143 (55.24%), Query Frame = 1 Query: 193 RKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ-NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQ 618 RK M++F+ +Q D + N++ W +I PD+ P+D G F++ + F +YP KPP + F ++++HPNI G +CL ++ W P ++ S+ +L+ DP P P ++ A +S++++++ + E ++ Sbjct: 15 RKCGMKNFRNIQVD----------EANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKK 146
BLAST of CF835063 vs. ExPASy Swiss-Prot
Match: UB2L3_BOVIN (Ubiquitin-conjugating enzyme E2 L3 OS=Bos taurus GN=UBE2L3 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.315e-17 Identity = 40/143 (27.97%), Postives = 79/143 (55.24%), Query Frame = 1 Query: 193 RKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ-NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQ 618 RK M++F+ +Q D + N++ W +I PD+ P+D G F++ + F +YP KPP + F ++++HPNI G +CL ++ W P ++ S+ +L+ DP P P ++ A +S++++++ + E ++ Sbjct: 15 RKCGMKNFRNIQVD----------EANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKK 146
BLAST of CF835063 vs. ExPASy Swiss-Prot
Match: UB2L3_PONAB (Ubiquitin-conjugating enzyme E2 L3 OS=Pongo abelii GN=UBE2L3 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.330e-17 Identity = 39/145 (26.90%), Postives = 80/145 (55.17%), Query Frame = 1 Query: 190 ARKRLMRDFKRLQQDPPAGISGAPQDN-NIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ-NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQ 618 A +RLM++ + +++ D N++ W +I PD+ P+D G F++ + F +YP KPP + F ++++HPNI G +CL ++ W P ++ S+ +L+ DP P P ++ A +S++++++ + E ++ Sbjct: 3 ASRRLMKELEEIRKCGMKNFRNIRVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKK 146
BLAST of CF835063 vs. ExPASy Swiss-Prot
Match: UBCD4_DROME (Ubiquitin-conjugating enzyme E2-22 kDa OS=Drosophila melanogaster GN=UbcD4 PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 5.655e-17 Identity = 48/136 (35.29%), Postives = 77/136 (56.62%), Query Frame = 1 Query: 178 MSTPARKRLMRDFK---RLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSE 573 M+ A R+ R+FK R ++ I +++ I GP DTP++GG F L ++ E YP PP VRF++R++HPNI + G+ICLDIL++ W+ + +L S+Q+LL P+ P ++ A F + Sbjct: 1 MANMAVSRIKREFKEVMRSEEIVQCSIKIELVNDSWTELRGEIAGPPDTPYEGGKFVLEIKVPETYPFNPPKVRFITRIWHPNISSVTGAICLDILKDNWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVAYQFKD 136
BLAST of CF835063 vs. ExPASy Swiss-Prot
Match: UB2L6_HUMAN (Ubiquitin/ISG15-conjugating enzyme E2 L6 OS=Homo sapiens GN=UBE2L6 PE=1 SV=4) HSP 1 Score: 88.1965 bits (217), Expect = 5.655e-17 Identity = 40/141 (28.37%), Postives = 78/141 (55.32%), Query Frame = 1 Query: 190 ARKRLMRDFKRLQQDPPAGISGAPQDN-NIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ-WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 606 A R++++ + LQ+ PP + D+ N+++W+A++ PD P+ F L + F +YP KPP ++F ++++HPN+ +G ICL I+ ++ W P +L ++ L+ PN P + A + ++N + + E Sbjct: 3 ASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVDENGQICLPIISSENWKPCTKTCQVLEALNVLVNRPNIREPLRMDLADLLTQNPELFRKNAEE 142
BLAST of CF835063 vs. ExPASy Swiss-Prot
Match: UB2L6_BOVIN (Ubiquitin/ISG15-conjugating enzyme E2 L6 OS=Bos taurus GN=UBE2L6 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.386e-17 Identity = 40/145 (27.59%), Postives = 82/145 (56.55%), Query Frame = 1 Query: 190 ARKRLMRDFKRLQQDPPAGISG-APQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQ 618 A KR+ ++ + LQ++ P + +++N+++W+A++ P+ P++ F+L + F +YP +PPTV+F +R++HPN+ DG +CL I+ + W +L ++ L+ P P P E A +++ +++ +E Q Sbjct: 3 ASKRVAKELEDLQKELPKYLRNLCSEEDNVLVWHALLL-PERPPYNLKAFRLCISFPREYPFQPPTVKFTTRIYHPNVDRDGRVCLPIISKKNWKASTRTCQVLEALNMLVNQPEPGQPVRLELAEQLTQDPELFDQMAQEFTLQ 146
BLAST of CF835063 vs. ExPASy Swiss-Prot
Match: UBE2Z_XENLA (Ubiquitin-conjugating enzyme E2 Z OS=Xenopus laevis GN=ube2z PE=2 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 2.149e-16 Identity = 50/151 (33.11%), Postives = 79/151 (52.32%), Query Frame = 1 Query: 181 STPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSR-----MFHPNIYADGSICLDILQN----QWSPIYDVAAILTSIQSLLCD-PNPNSPANSEAARMFSENKREYNRRVR 603 ST R+ RD + ++PP G+ P +++ +A+I GP DTP++GG F + DYP PP V+ ++ F+PN Y +G +CL IL WSP ++++L SIQSL+ + P N P + S + + YN +R Sbjct: 56 STQCVLRIKRDIMSIYKEPPPGMFVVPDPHDMTKIHALITGPFDTPYEGGFFLFLFRCPPDYPIHPPRVKLMTTGNNTVRFNPNFYRNGKVCLSILGTWTGPAWSPAQSLSSVLISIQSLMTENPYHNEPGFEQ--ERHSGDSKNYNECIR 204
BLAST of CF835063 vs. ExPASy Swiss-Prot
Match: UBE2Z_XENTR (Ubiquitin-conjugating enzyme E2 Z OS=Xenopus tropicalis GN=ube2z PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 4.787e-16 Identity = 48/145 (33.10%), Postives = 77/145 (53.10%), Query Frame = 1 Query: 199 RLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSR-----MFHPNIYADGSICLDILQN----QWSPIYDVAAILTSIQSLLCD-PNPNSPANSEAARMFSENKREYNRRVR 603 R+ RD + ++PP G+ P +++ +A+I GP DTP++GG F + DYP PP V+ ++ F+PN Y +G +CL IL WSP ++++L SIQSL+ + P N P + S + + YN +R Sbjct: 62 RIKRDIMSIYKEPPPGMFVVPDPHDMTKIHALITGPFDTPYEGGFFLFLFRCPPDYPIHPPRVKLMTTGNNTVRFNPNFYRNGKVCLSILGTWTGPAWSPAQSLSSVLISIQSLMTENPYHNEPGFEQ--ERHSGDSKNYNECIR 204
BLAST of CF835063 vs. ExPASy Swiss-Prot
Match: UBE2Z_DANRE (Ubiquitin-conjugating enzyme E2 Z OS=Danio rerio GN=ube2z PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 4.787e-16 Identity = 47/144 (32.64%), Postives = 77/144 (53.47%), Query Frame = 1 Query: 199 RLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSR-----MFHPNIYADGSICLDILQN----QWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVR 603 R+ RD + ++PP G+ P +++ +A+I GP DTP++GG F + DYP PP V+ ++ F+PN Y +G +CL IL WSP ++++L SIQSL+ + ++ E R ++K YN +R Sbjct: 75 RIKRDIMSIYKEPPPGMFVVPDPHDMTKIHALITGPFDTPYEGGFFLFLFRCPPDYPIHPPRVKLITTGHNTVRFNPNFYRNGKVCLSILGTWTGPAWSPAQSISSVLISIQSLMTENPYHNEPGFEQERHPGDSK-NYNECIR 217 The following BLAST results are available for this feature:
BLAST of CF835063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 255
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835063 ID=CF835063; Name=CF835063; organism=Citrus sinensis; type=EST; length=789bpback to top |