CF835063
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835063 vs. ExPASy Swiss-Prot
Match: UBC34_ARATH (Ubiquitin carrier protein E2 34 OS=Arabidopsis thaliana GN=UBC34 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.594e-11 Identity = 37/119 (31.09%), Postives = 65/119 (54.62%), Query Frame = 1 Query: 196 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPN--IYADGSICL---DILQNQWSPIYDVAAILTSIQSLLCDPNPNS 537 KRL ++++ L ++P + + P N+I+ W+ V+ G + TP+ GG + ++F +YP KPP + M PN ICL D W+P++ V++ILT + S + D +P + Sbjct: 8 KRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYKPPGI----TMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTT 122
BLAST of CF835063 vs. ExPASy Swiss-Prot
Match: BIRC6_HUMAN (Baculoviral IAP repeat-containing protein 6 OS=Homo sapiens GN=BIRC6 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.081e-11 Identity = 47/163 (28.83%), Postives = 76/163 (46.63%), Query Frame = 1 Query: 181 STPARKRLMRDFKRLQQDPPAGISGAP----QDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFV-----SRMFHPNIYADGSICLDIL-------QNQWSP-IYDVAAILTSIQSLL--CDPNPNSPA--NSEAARMFSENKREYNRRVRE 606 S +RL ++ L P S + + + + +I GP DTP+ G F+ + F +DYP+ PP V S F+PN+Y DG +CL IL + +W+P +L S+QSL+ +P N P S +++ REY+ +R+ Sbjct: 4543 SAARARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGHSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQSSREYDGNIRQ 4705
BLAST of CF835063 vs. ExPASy Swiss-Prot
Match: UBC26_ARATH (Probable ubiquitin carrier protein E2 26 OS=Arabidopsis thaliana GN=UBC26 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 3.550e-11 Identity = 46/148 (31.08%), Postives = 75/148 (50.68%), Query Frame = 1 Query: 196 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVS--RMFHPNIYADGSICLDIL-------QNQWSPIYD-VAAILTSIQSLLCDPNP--NSPANSEAA---------RMFSEN 576 K++ D+K L+ D P IS ++ + L AVI G + TP+ G F +QF + YP+ PP V + S +PN+Y G +CL +L + +W P + +L SIQ+L+ + P N P ++A +++SEN Sbjct: 274 KKVQADWKILENDLPEAISVRACESRMDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVHYHSGGLRINPNLYNCGKVCLSLLGTWAGSAREKWLPNESTMLQLLVSIQALILNEKPYFNEPGYVQSAGTASGESKSKVYSEN 421
BLAST of CF835063 vs. ExPASy Swiss-Prot
Match: UBE2F_XENTR (NEDD8-conjugating enzyme UBE2F OS=Xenopus tropicalis GN=ube2f PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.056e-11 Identity = 39/146 (26.71%), Postives = 73/146 (50.00%), Query Frame = 1 Query: 202 LMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ------WSPIYDVAAILTSIQSLLCD-PNPNSPANSEAARMFSENKREYNRRVREIVEQ 618 L+++ L+ + P D N + + + PD++ + GG F+ ++ + Y PP V+ ++R++HPNI G ICL +L+ W+P + ++ + SL D N + P N EAA +K EY +V + +++ Sbjct: 37 LVKEVAELEANLPCTCKVNFPDPNKLHYFHLTVSPDESYYQGGRFQFEIEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKDEYRNKVEDYIKR 182
BLAST of CF835063 vs. ExPASy Swiss-Prot
Match: UBE2F_XENLA (NEDD8-conjugating enzyme UBE2F OS=Xenopus laevis GN=ube2f PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.056e-11 Identity = 39/146 (26.71%), Postives = 73/146 (50.00%), Query Frame = 1 Query: 202 LMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ------WSPIYDVAAILTSIQSLLCD-PNPNSPANSEAARMFSENKREYNRRVREIVEQ 618 L+++ L+ + P D N + + + PD++ + GG F+ ++ + Y PP V+ ++R++HPNI G ICL +L+ W+P + ++ + SL D N + P N EAA +K EY +V + +++ Sbjct: 37 LVKEVAELEANLPCTCKVNFPDPNKLHYFHLTVSPDESYYQGGRFQFEIEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKDEYRNKVEDYIKR 182 The following BLAST results are available for this feature:
BLAST of CF835063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 255
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835063 ID=CF835063; Name=CF835063; organism=Citrus sinensis; type=EST; length=789bpback to top |