CF835090

Overview
NameCF835090
Unique NameCF835090
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length783
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10176 contig Csv1_Contig10176:18..798. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835090 vs. ExPASy Swiss-Prot
Match: SPI5_SOLTU (Serine protease inhibitor 5 OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.478e-11
Identity = 55/188 (29.26%), Postives = 94/188 (50.00%), Query Frame = 2
Query:   83 LGISSNSEPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG----TNGQCPLDVIQLSSP-SERGDNLRLLPYDNY--KIVKVSTDVNLRFPVKVSVKPCNEEPLWKVDSYD----DPLIVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSCPRRCNKIGVSTKDGVRRLLLVGDH 613
            + + S++ PVLD+ G ++   L Y++I +  GA G   +LG    ++  C   V + +S     G  +R +   ++    +     +N++F +  +VK C    +WKV  YD      L+ TGG+ G   +    +WFKI K+        YN+++CP    S  + C K+GV  ++G RRL LV D+
Sbjct:   27 INLPSDATPVLDVTGKELDPRLSYRIISIGRGALGGDVYLGKSPNSDAPCANGVFRFNSDVGPSGTPVRFIGSSSHFGPHIFEGELLNIQFDIS-TVKLCVSYTIWKVGDYDASLGTMLLETGGTIGQADS----SWFKIVKSSQLG----YNLLYCP--FSSDDQFCLKVGVVHQNGKRRLALVKDN 203          
BLAST of CF835090 vs. ExPASy Swiss-Prot
Match: API8_SOLTU (Aspartic protease inhibitor 8 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.478e-11
Identity = 61/202 (30.20%), Postives = 95/202 (47.03%), Query Frame = 2
Query:   74 QPLLGISSNS---EPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG----TNGQCPLDVIQLSSP-SERGDNLRLLPYDNYKIVKVSTDVNLRFPVKVSVKPCNEEPLWKVDS----YDDPLIVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSC--PRRCNKIGVSTKDGVRRLLLVGDHEPALNVLF 637
            Q L+ + S S   +PVLD  G ++     Y++I +  GA G   +LG    ++  CP  V + +S     G  +R +P           ++    P   +VK C    +WKV +    +   L+ TGG+ G   +    ++FKI K  NF Y  +Y  +  P +C  C     C K+GV  ++G RRL LV  +E  L+VLF
Sbjct:   25 QNLIDLPSESPLPKPVLDTNGKELNPDSSYRIISIGRGALGGDVYLGKSPNSDAPCPDGVFRYNSDVGPSGTPVRFIPLSGGIFEDQLLNIQFNIP---TVKLCVSYTIWKVGNLNAYFRTMLLETGGTIGQADS----SYFKIVKLSNFGYNLLYCPITPPFLCPFCRDDNFCAKVGVVIQNGKRRLALV--NENPLDVLF 217          
BLAST of CF835090 vs. ExPASy Swiss-Prot
Match: API11_SOLTU (Aspartic protease inhibitor 11 OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.749e-11
Identity = 58/189 (30.69%), Postives = 93/189 (49.21%), Query Frame = 2
Query:  104 EPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG----TNGQCPLDVIQLSSP-SERGDNLRLLPYDNYKIVKVSTDVNLRFPVKVSVKPCNEEPLWKVDS----YDDPLIVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSC--PRRCNKIGVSTKDGVRRLLLVGDHEPALNVLF 637
            +PVLD  G ++     Y++I +  GA G   +LG    ++  CP  V + +S     G  +R +P      +     +N++F +  +VK C    +WKV +    +   L+ TGG+ G   +    ++FKI K  NF Y  +Y  +  P +C  C     C K+GV  ++G RRL LV  +E  L+VLF
Sbjct:    6 KPVLDTNGKELNPNSSYRIISIGRGALGGDVYLGKSPNSDAPCPDGVFRYNSDVGPSGTPVRFIPLSGG--IFEDQLLNIQFNI-ATVKLCVSYTIWKVGNLNAYFRTMLLETGGTIGQADS----SYFKIVKLSNFGYNLLYCPITPPFLCPFCRDDNFCAKVGVVIQNGKRRLALV--NENPLDVLF 185          
The following BLAST results are available for this feature:
BLAST of CF835090 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
SPI5_SOLTU3.478e-1129.26Serine protease inhibitor 5 OS=Solanum tuberosum P... [more]
API8_SOLTU3.478e-1130.20Aspartic protease inhibitor 8 OS=Solanum tuberosum... [more]
API11_SOLTU7.749e-1130.69Aspartic protease inhibitor 11 OS=Solanum tuberosu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06K12_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06K12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835090 ID=CF835090; Name=CF835090; organism=Citrus sinensis; type=EST; length=783bp
CTTCCAGTGGCAAATAAAAATGAAGACTTCATTGATAACAACACTCTCCT
TCCTTATCCTTACCTTGGCCACGCAGCCTCTATTGGGCATCTCATCAAAC
TCTGAACCTGTCTTAGATATCATTGGCAACAAGGTCAAATCCACCCTCGA
GTATAAACTTATCCCAGTCCTAGATGGCGCCGGTGGATTCAGCACACACC
TAGGCACAAATGGACAGTGTCCCTTGGACGTTATCCAATTAAGTTCTCCT
AGCGAAAGGGGAGATAATTTAAGATTACTTCCGTACGACAATTACAAAAT
TGTCAAGGTATCCACTGATGTCAACCTGAGATTCCCCGTAAAAGTTTCTG
TTAAGCCCTGTAATGAAGAACCATTGTGGAAAGTTGATAGCTATGACGAT
CCATTAATTGTAACCGGCGGAAGTGAGGGCCACCCAGGAGCTGAAACGTT
GCTAAATTGGTTTAAGATTGAGAAAGCTGGAAATTTTTCATATGGTGGTG
TATACAATATTGTCCATTGTCCGAGTGTCTGTCTATCTTGTCCTAGACGC
TGCAACAAAATTGGCGTTTCAACTAAGGATGGCGTTCGACGTCTGCTTCT
AGTTGGTGATCATGAACCGGCTTTGAATGTTCTGTTTTTTCCATCAGAGG
AAAGCTCAAGGCTACTTCAAGCTGCTAACGCAATATCAAGGTTTTTTGAA
GCTGCTGAAGCAATATCAATGACCGCGTAATGAATGAACTTAGCTGTATC
ATTCTAAATAATAGACCAGGCTAGTAACCTTTT
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