CF835130

Overview
NameCF835130
Unique NameCF835130
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: Y1571_ARATH (Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.196e-18
Identity = 65/194 (33.51%), Postives = 103/194 (53.09%), Query Frame = 2
Query:  179 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKT-----SCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHL--DLEAGSEKVLEWATRISVIKGIAKGISYLHGKR-PGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 736
            F  +++  +T  F   +L+G   +S  Y+  L+D +++AVK +  T     S    + EFL  +K LT ++H N+  L G C    R   FLIY+++  G+L + L  D EA   K L W  RI+V+KG+A  +SY+H  R   +VH ++S+  +L+   Y   +SD G  KLL  D   +    +   GY+AP
Sbjct:  839 FKYQDIIESTNEFDPTHLIGTGGYSKVYRANLQD-TIIAVKRLHDTIDEEISKPVVKQEFLNEVKALTEIRHRNVVKLFGFCSH--RRHTFLIYEYMEKGSLNKLLANDEEA---KRLTWTKRINVVKGVAHALSYMHHDRITPIVHRDISSGNILLDNDYTAKISDFGTAKLLKTD-SSNWSAVAGTYGYVAP 1025          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.563e-18
Identity = 67/203 (33.00%), Postives = 100/203 (49.26%), Query Frame = 2
Query:  158 EVLESFMFN------LEEVERATQCFSEANLLGKSSFSATYKGILRDGSV--VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHL-DLEAGSEKVLEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 736
            EVLE +  N       +++  AT  F E  ++G   F   ++G L   S   +AVK I   S +    EF+  ++ L  L+H+NL +L+G C  K + +  LIYD++PNG+L   L      S  VL W  R  + KGIA G+ YLH +    ++H ++    VLI    NP L D GL +L       +       +GY+AP
Sbjct:  336 EVLEDWEINHPHRLRYKDLYAATDGFKENRIVGTGGFGTVFRGNLSSPSSDQIAVKKITPNSMQGVR-EFIAEIESLGRLRHKNLVNLQGWC--KQKNDLLLIYDYIPNGSLDSLLYSRPRQSGVVLSWNARFKIAKGIASGLLYLHEEWEKVVIHRDIKPSNVLIEDDMNPRLGDFGLARLYERGSQSNTTVVVGTIGYMAP 535          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: CRK30_ARATH (Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana GN=CRK30 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.563e-18
Identity = 60/190 (31.58%), Postives = 98/190 (51.58%), Query Frame = 2
Query:  179 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEK--VLEWATRISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLAD-DIVFSMLKASAAMGYLAP 736
            F+++++E AT  F  +N +G+  F   YKG L +G+ VAVK +++TS    E EF   + ++  L+H NL  L G        E  L+++FVPN +L   L       K   L+W  R ++I GI +G+ YLH   R  ++H ++ A  +L+    NP ++D G+ +   D     S  +     GY+ P
Sbjct:  334 FDIKDIEAATSNFLASNKIGQGGFGEVYKGTLSNGTEVAVKRLSRTS-DQGELEFKNEVLLVAKLQHRNLVRLLGFALQ--GEEKILVFEFVPNKSLDYFLFGSTNPTKKGQLDWTRRYNIIGGITRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNFRDHQTEDSTGRVVGTFGYMPP 520          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.041e-18
Identity = 69/222 (31.08%), Postives = 117/222 (52.70%), Query Frame = 2
Query:  104 SNGWDPLAKGQ-SGNGFSQEVLESFM---FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGS-VVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHL-DLEAGSEKVLEWATRISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL----LADDIVFSMLKASAAMGYLAP 736
            ++ W PL  G  S N  S   L S +   F++ E++ AT  F E  ++G   F + YKG +  G+ +VAVK +  TS +  + EF   L++L+ L+H +L SL G C      E  L+Y+++P+G L  HL   +  S+  L W  R+ +  G A+G+ YLH G +  ++H ++    +L+   +   +SD GL ++     +   V +++K +   GYL P
Sbjct:  484 NSSWGPLLHGTGSTNTKSASSLPSDLCRRFSIYEIKSATNDFEEKLIIGVGGFGSVYKGRIDGGATLVAVKRLEITSNQGAK-EFDTELEMLSKLRHVHLVSLIGYC--DDDNEMVLVYEYMPHGTLKDHLFRRDKASDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVAKVSDFGLSRVGPTSASQTHVSTVVKGT--FGYLDP 700          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.041e-18
Identity = 56/170 (32.94%), Postives = 92/170 (54.12%), Query Frame = 2
Query:  167 ESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECF-LIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHK 670
            +S  F   EV + T+ F    +LGK  F   Y G ++    VAVK ++++S +  + EF   + +L  + H NL SL G CC    G+   L+Y+F+PNG+L QHL  + G+  ++ W+ R+ +    A G+ YLH G  P +VH ++    +L+   +   L+D GL +
Sbjct:  550 KSKRFTYSEVVQVTKNFQR--VLGKGGFGMVYHGTVKGSEQVAVKVLSQSSTQGSK-EFKAEVDLLLRVHHTNLVSLVGYCCE---GDYLALVYEFLPNGDLKQHLSGKGGN-SIINWSIRLRIALEAALGLEYLHIGCTPPMVHRDVKTANILLDENFKAKLADFGLSR 712          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.041e-18
Identity = 60/197 (30.46%), Postives = 96/197 (48.73%), Query Frame = 2
Query:  149 FSQEVLESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 736
            F+QE   S + N  +V  AT   +E   +G+ +    Y+  L  G V AVK +   S        ++ +  +  ++H NL  L G    K  G   ++Y ++P G+L   L   +  E VL+W+ R +V  G+A G++YLH    P +VH ++  E +L+     P + D GL +LL DD   S    +   GY+AP
Sbjct:  807 FTQEEGPSLLLN--KVLAATDNLNEKYTIGRGAHGIVYRASLGSGKVYAVKRLVFASHIRANQSMMREIDTIGKVRHRNLIKLEGFWLRKDDG--LMLYRYMPKGSLYDVLHGVSPKENVLDWSARYNVALGVAHGLAYLHYDCHPPIVHRDIKPENILMDSDLEPHIGDFGLARLL-DDSTVSTATVTGTTGYIAP 998          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.041e-18
Identity = 58/181 (32.04%), Postives = 94/181 (51.93%), Query Frame = 2
Query:  200 RATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVFSMLKASAAMGYLAP 736
            +AT  F   +L+G   F   YK IL+DGS VA+K +   S + D  EF+  ++ +  +KH NL  L G C  K   E  L+Y+F+  G+L   L     +   L W+TR  +  G A+G+++LH    P ++H ++ +  VL+       +SD G+ +L+ A D   S+   +   GY+ P
Sbjct:  878 QATNGFHNDSLIGSGGFGDVYKAILKDGSAVAIKKLIHVSGQGDR-EFMAEMETIGKIKHRNLVPLLGYC--KVGDERLLVYEFMKYGSLEDVLHDPKKAGVKLNWSTRRKIAIGSARGLAFLHHNCSPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPP 1055          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: Y4391_ARATH (Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.665e-18
Identity = 69/229 (30.13%), Postives = 114/229 (49.78%), Query Frame = 2
Query:   77 SSPLISLEYSNGWDPLAKG--QSGNGFSQEVLESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEG--EFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAM----GYLAP 736
            SS L+ +   +     +KG  Q  N ++  +     F+L E++ AT+ F  + ++G   F   Y G L DG+ VAVK   + + +S++G  EF   +++L+ L+H +L SL G C      E  L+Y+F+ NG    H  L   +   L W  R+ +  G A+G+ YLH G   G++H ++ +  +L+       ++D GL K    D+ F     S A+    GYL P
Sbjct:  478 SSWLLPIHAGDSTFMTSKGGSQKSNFYNSTLGLGRYFSLSELQEATKNFEASQIIGVGGFGNVYIGTLDDGTKVAVK---RGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYC--DENSEMILVYEFMSNGPFRDH--LYGKNLAPLTWKQRLEICIGSARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSK----DVAFGQNHVSTAVKGSFGYLDP 695          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: Y2393_ARATH (Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.665e-18
Identity = 66/228 (28.95%), Postives = 110/228 (48.25%), Query Frame = 2
Query:   68 RRNSSPLISLEYSNGWD-PLAKGQSGNG--FSQEVLESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLAD-DIVFSMLKASAAMGYLAP 736
            RR  +  +   +S G D  + K ++G    FS   +  + + L  ++ AT  F E+ ++G   F   YKG+LRD + VAVK  A  S +    EF   +++LT  +H +L SL G C      E  ++Y+++  G L  HL  +   +  L W  R+ +  G A+G+ YLH G    ++H ++ +  +L+   +   ++D GL K   D D          + GYL P
Sbjct:  436 RRRRNRQMQTVHSRGDDHQIKKNETGESLIFSSSKI-GYRYPLALIKEATDDFDESLVIGVGGFGKVYKGVLRDKTEVAVKRGAPQS-RQGLAEFKTEVEMLTQFRHRHLVSLIGYC--DENSEMIIVYEYMEKGTLKDHL-YDLDDKPRLSWRQRLEICVGAARGLHYLHTGSTRAIIHRDVKSANILLDDNFMAKVADFGLSKTGPDLDQTHVSTAVKGSFGYLDP 658          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: PSYR1_ARATH (Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.665e-18
Identity = 53/183 (28.96%), Postives = 96/183 (52.46%), Query Frame = 2
Query:  191 EVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHG-KRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 736
            E+ +AT  FS+AN++G   F   YK  L +G+ +AVK +       ++ EF   +++L+  KHENL +L+G C         LIY F+ NG+L   L         L+W  R+++++G + G++Y+H    P +VH ++ +  +L+   +   ++D GL +L+         +    +GY+ P
Sbjct:  795 ELLKATDNFSQANIIGCGGFGLVYKATLDNGTKLAVKKLTGDYGMMEK-EFKAEVEVLSRAKHENLVALQGYCVHDSAR--ILIYSFMENGSLDYWLHENPEGPAQLDWPKRLNIMRGASSGLAYMHQICEPHIVHRDIKSSNILLDGNFKAYVADFGLSRLILPYRTHVTTELVGTLGYIPP 974          
The following BLAST results are available for this feature:
BLAST of CF835130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 263
Match NameE-valueIdentityDescription
Y1571_ARATH1.196e-1833.51Probable leucine-rich repeat receptor-like protein... [more]
LRKA2_ARATH1.563e-1833.00Lectin-domain containing receptor kinase A4.2 OS=A... [more]
CRK30_ARATH1.563e-1831.58Putative cysteine-rich receptor-like protein kinas... [more]
Y5389_ARATH2.041e-1831.08Probable receptor-like protein kinase At5g38990 OS... [more]
RLK7_ARATH2.041e-1832.94Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
PEPR1_ARATH2.041e-1830.46Leucine-rich repeat receptor-like protein kinase P... [more]
BRI1_ARATH2.041e-1832.04Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
Y4391_ARATH2.665e-1830.13Probable receptor-like protein kinase At4g39110 OS... [more]
Y2393_ARATH2.665e-1828.95Probable receptor-like protein kinase At2g39360 OS... [more]
PSYR1_ARATH2.665e-1828.96Tyrosine-sulfated glycopeptide receptor 1 OS=Arabi... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_06L14_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06L14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835130 ID=CF835130; Name=CF835130; organism=Citrus sinensis; type=EST; length=737bp
GAAAATTGGAACTGTTTTTGATAATTCAGATAGTCGTCTTAGTACCGACC
ACCTAAAGGAGGTTTGCAGGAGAAATTCTTCCCCACTTATCAGCCTTGAG
TATTCCAATGGATGGGATCCGTTGGCCAAAGGTCAGAGTGGAAATGGGTT
TTCTCAGGAAGTTCTTGAGAGTTTCATGTTTAATTTGGAAGAGGTGGAGC
GAGCAACTCAGTGTTTCTCAGAGGCGAATTTGCTGGGAAAGAGCAGTTTT
TCTGCCACCTACAAAGGGATCCTGAGAGATGGATCAGTTGTTGCTGTAAA
GTGCATTGCCAAGACAAGTTGCAAGTCTGACGAAGGTGAGTTTTTGAAGG
GGCTAAAGATATTGACCTCATTAAAACATGAAAATCTTGCAAGCTTGAGA
GGTATCTGCTGTTCAAAAGGCAGAGGTGAGTGTTTTCTCATCTATGATTT
TGTCCCCAATGGAAACCTCTTACAGCATCTTGATTTAGAGGCAGGCAGTG
AAAAGGTTCTTGAATGGGCTACCAGAATTTCTGTCATAAAGGGAATTGCC
AAAGGGATCAGTTATTTACATGGAAAGAGACCTGGTCTAGTTCACCCGAA
TTTGTCTGCTGAGAAGGTGCTCATTCATAGACGATATAATCCCTTGCTTT
CAGATTCTGGCCTGCACAAACTCCTTGCAGATGATATTGTTTTCTCAATG
CTCAAAGCCAGTGCTGCCATGGGATATCTGGCTCCTG
back to top