CF835130

Overview
NameCF835130
Unique NameCF835130
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: GSO1_ARATH (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.665e-18
Identity = 59/191 (30.89%), Postives = 92/191 (48.17%), Query Frame = 2
Query:  188 EEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLE----AGSEKVLEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL---ADDIVFSMLKASAAMGYLAP 736
            E++  AT   SE  ++G       YK  L +G  VAVK I           F + +K L  ++H +L  L G C SK  G   LIY+++ NG++   L  +       +K+L+W  R+ +  G+A+G+ YLH    P +VH ++ +  VL+       L D GL K+L    D    S    + + GY+AP
Sbjct:  942 EDIMEATHNLSEEFMIGSGGSGKVYKAELENGETVAVKKILWKDDLMSNKSFSREVKTLGRIRHRHLVKLMGYCSSKSEGLNLLIYEYMKNGSIWDWLHEDKPVLEKKKKLLDWEARLRIAVGLAQGVEYLHHDCVPPIVHRDIKSSNVLLDSNMEAHLGDFGLAKVLTENCDTNTDSNTWFACSYGYIAP 1132          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.481e-18
Identity = 59/207 (28.50%), Postives = 101/207 (48.79%), Query Frame = 2
Query:  131 GQSGNGFSQEVLES--FMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAK-TSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHL-DLEAGSEKVLEWATRISVIKGIAKGISYLHG-KRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 736
            G S  G + +++E+   + +++ +   T  FS  N+LG   F   YKG L DG+ +AVK +           EF   + +LT ++H +L +L G C      E  L+Y+++P G L +HL +      K L W  R+++   +A+G+ YLHG      +H +L    +L+       ++D GL +L  +       + +   GYLAP
Sbjct:  558 GTSEVGDNIQMVEAGNMLISIQVLRSVTNNFSSDNILGSGGFGVVYKGELHDGTKIAVKRMENGVIAGKGFAEFKSEIAVLTKVRHRHLVTLLGYCLD--GNEKLLVYEYMPQGTLSRHLFEWSEEGLKPLLWKQRLTLALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAP 762          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: CRK22_ARATH (Cysteine-rich receptor-like protein kinase 22 OS=Arabidopsis thaliana GN=CRK22 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.481e-18
Identity = 57/166 (34.34%), Postives = 93/166 (56.02%), Query Frame = 2
Query:  170 SFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGL 664
            S  +  + +E AT  FS++N LG+  F   YKG   +G+ VAVK ++K S   D  +F     +++ ++H NLA L G C  +G G+ FLIY+FV N + L +   +   +  L+W  R  +I GIA+GI +LH   +  +++ +  A  +L+    NP +SD G+
Sbjct:  338 SLQYEFKTIEAATNKFSKSNKLGEGRFGEVYKGKFSNGTEVAVKRLSKVS-GQDTKKFRNEAVLVSKIQHRNLARLLGFCL-QGDGK-FLIYEFVLNKS-LDYFLFDPEKQGELDWTRRYKIIGGIAQGILHLHQDPQLTIIYRDFKASNILLDADMNPKISDFGM 499          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: Y3804_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 OS=Arabidopsis thaliana GN=At3g28040 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.546e-18
Identity = 61/188 (32.45%), Postives = 97/188 (51.60%), Query Frame = 2
Query:  188 EEVERATQCF-SEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA--DDIVFSMLKASAAMGYLAP 736
            +E ER  +   ++A+ +G+  F   YK  L + G  +AVK +  +    +  +F + ++IL   KH NL S++G   +       L+ +++PNGNL   L     S   L W  R  +I G AKG++YLH   RP  +H NL    +L+  + NP +SD GL +LL   D    +  +   A+GY+AP
Sbjct:  716 QEFERNPESLLNKASRIGEGVFGTVYKAPLGEQGRNLAVKKLVPSPILQNLEDFDREVRILAKAKHPNLVSIKGYFWTPDLH--LLVSEYIPNGNLQSKLHEREPSTPPLSWDVRYKIILGTAKGLAYLHHTFRPTTIHFNLKPTNILLDEKNNPKISDFGLSRLLTTQDGNTMNNNRFQNALGYVAP 901          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.546e-18
Identity = 57/190 (30.00%), Postives = 96/190 (50.53%), Query Frame = 2
Query:  170 SFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRP-GLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 736
            S +F+  E+E+AT  F+   +LG+      YKG+L DG +VAVK  +K   +    EF+  + +L  + H N+  L G CC +      L+Y+FVPNG+L + L  E   + ++ W  R+ +   IA  +SYLH      + H ++    +L+  +Y   +SD G  + +  D      + +   GY+ P
Sbjct:  409 SKIFSSNELEKATDNFNTNRVLGQGGQGTVYKGMLVDGRIVAVK-RSKAMDEDKVEEFINEVVVLAQINHRNIVKLLG-CCLETEVP-VLVYEFVPNGDLCKRLRDEC-DDYIMTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDEKYQVKVSDFGTSRSVTIDQTHLTTQVAGTFGYVDP 594          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: Y4374_ARATH (Probable inactive receptor kinase At4g23740 OS=Arabidopsis thaliana GN=At4g23740 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.938e-18
Identity = 54/172 (31.40%), Postives = 98/172 (56.98%), Query Frame = 2
Query:  170 SFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKV-LEWATRISVIKGIAKGISYLHGKRPG-LVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA 679
            ++ F+LE++ RA+     A +LGK +F  TYK +L D + VAVK +   +  + + +F + ++I+  +KHEN+  L+    SK   E  ++YD+   G++   L    G  ++ L+W TR+ +  G AKGI+ +H +  G LVH N+ +  + ++   N  +SD GL  +++
Sbjct:  327 NYSFDLEDLLRAS-----AEVLGKGTFGTTYKAVLEDATSVAVKRLKDVA--AGKRDFEQQMEIIGGIKHENVVELKAYYYSK--DEKLMVYDYFSRGSVASLLHGNRGENRIPLDWETRMKIAIGAAKGIARIHKENNGKLVHGNIKSSNIFLNSESNGCVSDLGLTAVMS 489          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.938e-18
Identity = 63/221 (28.51%), Postives = 103/221 (46.61%), Query Frame = 2
Query:  113 WDPLAKGQSGNGFSQEVLE---SFMFNLE--------EVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLH--GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 736
            W PL   + G+  ++ + +   S + NL         ++  AT  F E  L+GK  F   YK IL DG+  A+K   KT       EF   +++L+ ++H +L SL G C  +   E  L+Y+F+  G L +H  L   +   L W  R+ +  G A+G+ YLH  G    ++H ++ +  +L+       ++D GL K+   D     +      GYL P
Sbjct:  443 WSPLPLHRGGSSDNRPISQYHNSPLRNLHLGLTIPFTDILSATNNFDEQLLIGKGGFGYVYKAILPDGTKAAIK-RGKTGSGQGILEFQTEIQVLSRIRHRHLVSLTGYC--EENSEMILVYEFMEKGTLKEH--LYGSNLPSLTWKQRLEICIGAARGLDYLHSSGSEGAIIHRDVKSTNILLDEHNIAKVADFGLSKIHNQDESNISINIKGTFGYLDP 658          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: WAKLL_ARATH (Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.938e-18
Identity = 61/204 (29.90%), Postives = 103/204 (50.49%), Query Frame = 2
Query:  134 QSGNGFSQEVLESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDE--GEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 736
            Q  N     V ++ +F+  E+E+AT  F++  ++G+      YKG+L DG  VAVK   K++   ++   EF+  + IL+ + H ++  L G CC +      L+Y+F+PNGNL QHL  E      L W  R+ +   I+   SYLH      + H ++ +  +L+  +Y   +SD G  + ++ D        S  +GY+ P
Sbjct:  427 QQLNTTQGRVEKTKLFSSRELEKATDNFNDNRVIGQGGQGTVYKGMLVDGRSVAVK---KSNVVDEDKLQEFINEVIILSQINHRHVVKLLG-CCLETEVP-ILVYEFIPNGNLFQHLHEEFDDYTAL-WGVRMRIAVDISGAFSYLHTAACSPIYHRDIKSTNILLDEKYRAKVSDFGTSRSVSIDHTHWTTVISGTVGYVDP 624          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: SRF3_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana GN=SRF3 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.938e-18
Identity = 54/189 (28.57%), Postives = 99/189 (52.38%), Query Frame = 2
Query:  179 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEG-EFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSML-KASAAMGYLAP 736
            +++  +++ T+ F++ NL+G     + Y+  L +G + AVK + K + +  +  EF++ +  +  ++H N+  L G C      +  L+Y++  NG L   L  +   +K L W TR+S+  G A+ + YLH    P ++H N  +  VL+    + L+SD GL  L++   V  +  +  AA GY AP
Sbjct:  473 YSIASLQQYTESFAQENLIGSGMLGSVYRARLPNGKLFAVKKLDKRASEQQQDHEFIELVNNIDMIRHSNIVELVGYCAE--HDQRLLVYEYCSNGTLQDGLHSDDEFKKKLSWNTRVSMALGAARALEYLHEVCEPPIIHRNFKSANVLLDDDLSVLVSDCGLAPLISSGSVSQLSGQLLAAYGYGAP 659          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: WAKLC_ARATH (Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 7.755e-18
Identity = 56/190 (29.47%), Postives = 97/190 (51.05%), Query Frame = 2
Query:  170 SFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRP-GLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 736
            S +F+  E+E+AT  FS   +LG+      YK +L DGS+VAVK  +K   +    EF+  + +L+ + H N+  L G CC +      L+Y+++PNG+L + L  E   + ++ W  R+ +   IA  +SY+H      + H ++    +L+  +Y   +SD G  + +A D        +   GY+ P
Sbjct:  413 SKIFSSRELEKATDNFSIDRVLGQGGQGTVYKRMLVDGSIVAVK-RSKVVDEDKMEEFINEIVLLSQINHRNIVKLLG-CCLETEVP-ILVYEYIPNGDLFKRLHDEY-DDYMMTWEVRLRIAVEIAGALSYMHSAASFPIFHRDIKTTNILLDEKYRAKISDFGTSRSVATDQTHLTTLVAGTFGYMDP 598          
The following BLAST results are available for this feature:
BLAST of CF835130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 263
Match NameE-valueIdentityDescription
GSO1_ARATH2.665e-1830.89LRR receptor-like serine/threonine-protein kinase ... [more]
TMK1_ARATH3.481e-1828.50Probable receptor protein kinase TMK1 OS=Arabidops... [more]
CRK22_ARATH3.481e-1834.34Cysteine-rich receptor-like protein kinase 22 OS=A... [more]
Y3804_ARATH4.546e-1832.45Probably inactive leucine-rich repeat receptor-lik... [more]
WAKLD_ARATH4.546e-1830.00Wall-associated receptor kinase-like 4 OS=Arabidop... [more]
Y4374_ARATH5.938e-1831.40Probable inactive receptor kinase At4g23740 OS=Ara... [more]
Y2232_ARATH5.938e-1828.51Probable receptor-like protein kinase At2g23200 OS... [more]
WAKLL_ARATH5.938e-1829.90Putative wall-associated receptor kinase-like 13 O... [more]
SRF3_ARATH5.938e-1828.57Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsi... [more]
WAKLC_ARATH7.755e-1829.47Wall-associated receptor kinase-like 3 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06L14_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06L14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835130 ID=CF835130; Name=CF835130; organism=Citrus sinensis; type=EST; length=737bp
GAAAATTGGAACTGTTTTTGATAATTCAGATAGTCGTCTTAGTACCGACC
ACCTAAAGGAGGTTTGCAGGAGAAATTCTTCCCCACTTATCAGCCTTGAG
TATTCCAATGGATGGGATCCGTTGGCCAAAGGTCAGAGTGGAAATGGGTT
TTCTCAGGAAGTTCTTGAGAGTTTCATGTTTAATTTGGAAGAGGTGGAGC
GAGCAACTCAGTGTTTCTCAGAGGCGAATTTGCTGGGAAAGAGCAGTTTT
TCTGCCACCTACAAAGGGATCCTGAGAGATGGATCAGTTGTTGCTGTAAA
GTGCATTGCCAAGACAAGTTGCAAGTCTGACGAAGGTGAGTTTTTGAAGG
GGCTAAAGATATTGACCTCATTAAAACATGAAAATCTTGCAAGCTTGAGA
GGTATCTGCTGTTCAAAAGGCAGAGGTGAGTGTTTTCTCATCTATGATTT
TGTCCCCAATGGAAACCTCTTACAGCATCTTGATTTAGAGGCAGGCAGTG
AAAAGGTTCTTGAATGGGCTACCAGAATTTCTGTCATAAAGGGAATTGCC
AAAGGGATCAGTTATTTACATGGAAAGAGACCTGGTCTAGTTCACCCGAA
TTTGTCTGCTGAGAAGGTGCTCATTCATAGACGATATAATCCCTTGCTTT
CAGATTCTGGCCTGCACAAACTCCTTGCAGATGATATTGTTTTCTCAATG
CTCAAAGCCAGTGCTGCCATGGGATATCTGGCTCCTG
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