CF835130

Overview
NameCF835130
Unique NameCF835130
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: Y5830_ARATH (Probable inactive receptor kinase At5g58300 OS=Arabidopsis thaliana GN=At5g58300 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.112e-15
Identity = 60/192 (31.25%), Postives = 100/192 (52.08%), Query Frame = 2
Query:  170 SFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKV-LEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 736
            S+ F+LE++ RA+     A +LGK S+   YK +L + + V VK + + +  + + EF + ++I++ +  H ++  LR    SK   E  ++ D+ P GNL   L    GSEK  L+W +R+ +    AKGI++LH    P   H N+ +  V++ +  +  +SD GL  L+A  I           GY AP
Sbjct:  348 SYNFDLEDLLRAS-----AEVLGKGSYGTAYKAVLEESTTVVVKRLKEVA--AGKREFEQQMEIISRVGNHPSVVPLRAYYYSK--DEKLMVCDYYPAGNLSSLLHGNRGSEKTPLDWDSRVKITLSAAKGIAHLHAAGGPKFSHGNIKSSNVIMKQESDACISDFGLTPLMAVPIA-----PMRGAGYRAP 525          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.112e-15
Identity = 56/198 (28.28%), Postives = 94/198 (47.47%), Query Frame = 2
Query:  176 MFNLEEVERATQCFSEANLLGKSSFSATYKGILR----------DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL-LADDIVFSMLKASAAMGYLAP 736
            ++N  +++ AT+ F   ++LG+  F   Y+G +            G +VA+K +   S +    E+   +  L  L H NL  L G C  +   E  L+Y+F+P G+L  HL           W  RI ++ G A+G+++LH  +  +++ +  A  +L+   Y+  LSD GL KL  AD+      +     GY AP
Sbjct:   73 VYNFLDLKTATKNFKPDSMLGQGGFGKVYRGWVDATTLAPSRVGSGMIVAIKRLNSESVQGF-AEWRSEVNFLGMLSHRNLVKLLGYC--REDKELLLVYEFMPKGSLESHLFRR---NDPFPWDLRIKIVIGAARGLAFLHSLQREVIYRDFKASNILLDSNYDAKLSDFGLAKLGPADEKSHVTTRIMGTYGYAAP 264          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3)

HSP 1 Score: 82.4185 bits (202), Expect = 2.758e-15
Identity = 57/206 (27.67%), Postives = 100/206 (48.54%), Query Frame = 2
Query:  128 KGQSGNGFSQEVLESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVK-CIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASA-AMGYLAP 736
            K Q    +     +   F  E+V    +C  E N++GK      Y+G + +   VA+K  + + + +SD G F   ++ L  ++H ++  L G   +K      L+Y+++PNG+L + L    G    L+W TR  V    AKG+ YLH    P ++H ++ +  +L+   +   ++D GL K L D      + + A + GY+AP
Sbjct:  666 KNQKSLAWKLTAFQKLDFKSEDV---LECLKEENIIGKGGAGIVYRGSMPNNVDVAIKRLVGRGTGRSDHG-FTAEIQTLGRIRHRHIVRLLGYVANKDTN--LLLYEYMPNGSLGELLHGSKGGH--LQWETRHRVAVEAAKGLCYLHHDCSPLILHRDVKSNNILLDSDFEAHVADFGLAKFLVDGAASECMSSIAGSYGYIAP 863          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.705e-15
Identity = 51/171 (29.82%), Postives = 92/171 (53.80%), Query Frame = 2
Query:  161 VLESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHK 670
            V ++  F   EV   T  F +  +LGK  F   Y G +     VAVK ++ +S +  + +F   +++L  + H+NL  L G C  +   +  LIY+++ NG+L +H+  + G   +L W TR+ +    A+G+ YLH G +P +VH ++    +L++  ++  L+D GL +
Sbjct:  561 VTKNKKFTYAEVLTMTNNFQK--ILGKGGFGIVYYGSVNGTEQVAVKMLSHSSAQGYK-QFKAEVELLLRVHHKNLVGLVGYC--EEGDKLALIYEYMANGDLDEHMSGKRGGS-ILNWGTRLKIALEAAQGLEYLHNGCKPLMVHRDVKTTNILLNEHFDTKLADFGLSR 725          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.705e-15
Identity = 49/148 (33.11%), Postives = 82/148 (55.41%), Query Frame = 2
Query:  230 LLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHK 670
            ++G+  F   Y G L D   VAVK ++ +S +  + EF   +++L  + H NL SL G C    +    LIY+++ NG+L  HL  + G + VL+W  R+S+    A G+ YLH G +P +VH ++ +  +L+   +   L+D GL +
Sbjct:  578 VIGEGGFGVVYHGYLNDSEQVAVKVLSPSSSQGYK-EFKAEVELLLRVHHINLVSLVGYC--DEQAHLALIYEYMANGDLKSHLSGKHG-DCVLKWENRLSIAVETALGLEYLHSGCKPLMVHRDVKSMNILLDEHFQAKLADFGLSR 721          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: Y5148_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g61480 OS=Arabidopsis thaliana GN=At5g61480 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.705e-15
Identity = 59/214 (27.57%), Postives = 104/214 (48.60%), Query Frame = 2
Query:  131 GQSGNGFSQEVLESFMFNLEEVERATQCFSEA-NLLGKSSFSATYKGILRDGSVVAVKCI-----AKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGEC-FLIYDFVPNGNLLQHLDLEAGSEKVL----EWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 736
            G++G       L +F       +   +C S+  N+LG  S    YK  + +G ++AVK +          +  +   L  + +L +++H N+  L G C ++   +C  L+Y+++PNG+L    DL  G +K +    EW     +  G+A+GI YLH    P +VH +L    +L+   +   ++D G+ KL+  D   SM   + + GY+AP
Sbjct:  690 GRNGGDIGPWKLTAFQRLNFTADDVVECLSKTDNILGMGSTGTVYKAEMPNGEIIAVKKLWGKNKENGKIRRRKSGVLAEVDVLGNVRHRNIVRLLGCCTNR---DCTMLLYEYMPNGSL---DDLLHGGDKTMTAAAEWTALYQIAIGVAQGICYLHHDCDPVIVHRDLKPSNILLDADFEARVADFGVAKLIQTD--ESMSVVAGSYGYIAP 895          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: PEPR2_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR2 OS=Arabidopsis thaliana GN=PEPR2 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.705e-15
Identity = 51/191 (26.70%), Postives = 88/191 (46.07%), Query Frame = 2
Query:  167 ESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 736
            E     L +V  AT    +  ++G+ +    Y+  L  G   AVK +             + ++ +  ++H NL  L      K  G   ++Y ++PNG+L   L      E VL+W+ R ++  GI+ G++YLH    P ++H ++  E +L+     P + D GL ++L DD   S    +   GY+AP
Sbjct:  778 EGLSLLLNKVLAATDNLDDKYIIGRGAHGVVYRASLGSGEEYAVKKLIFAEHIRANQNMKREIETIGLVRHRNLIRLERFWMRKEDG--LMLYQYMPNGSLHDVLHRGNQGEAVLDWSARFNIALGISHGLAYLHHDCHPPIIHRDIKPENILMDSDMEPHIGDFGLARIL-DDSTVSTATVTGTTGYIAP 965          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: RPK1_IPONI (Receptor-like protein kinase OS=Ipomoea nil GN=INRPK1 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 6.145e-15
Identity = 53/186 (28.49%), Postives = 89/186 (47.85%), Query Frame = 2
Query:  185 LEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIV-FSMLKASAAMGYLAP 736
            L +V  AT+  ++  ++GK +    YK  L    V AVK +  T  K+     ++ ++ +  ++H NL  L      K  G   ++Y ++ NG+L   L  E    K L+W+TR ++  G A G++YLH    P +VH ++    +L+     P +SD G+ KLL               +GY+AP
Sbjct:  806 LNKVLEATENLNDKYVIGKGAHGTIYKATLSPDKVYAVKKLVFTGIKNGSVSMVREIETIGKVRHRNLIKLEEFWLRKEYG--LILYTYMENGSLHDILH-ETNPPKPLDWSTRHNIAVGTAHGLAYLHFDCDPAIVHRDIKPMNILLDSDLEPHISDFGIAKLLDQSATSIPSNTVQGTIGYMAP 988          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: KPRO_MAIZE (Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 6.145e-15
Identity = 56/188 (29.79%), Postives = 98/188 (52.13%), Query Frame = 2
Query:  179 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVFSMLKASAAMGYLAP 736
            ++  E+ +AT+ F     LG+      YKG+L D   VAVK +     +  +  F   L ++  + H NL  + G C S+G     L+ ++V NG+L   L  E G+  +L+W  R ++  G+AKG++YLH +    ++H ++  E +L+ + + P ++D GL KLL       ++      +GY+AP
Sbjct:  524 YSYRELVKATRKFKVE--LGRGESGTVYKGVLEDDRHVAVKKLENV--RQGKEVFQAELSVIGRINHMNLVRIWGFC-SEGSHR-LLVSEYVENGSLANILFSEGGNI-LLDWEGRFNIALGVAKGLAYLHHECLEWVIHCDVKPENILLDQAFEPKITDFGLVKLLNRGGSTQNVSHVRGTLGYIAP 704          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: IRAK4_MOUSE (Interleukin-1 receptor-associated kinase 4 OS=Mus musculus GN=Irak4 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.145e-15
Identity = 58/198 (29.29%), Postives = 100/198 (50.51%), Query Frame = 2
Query:  179 FNLEEVERATQCFSE------ANLLGKSSFSATYKGILRDGSVVAVK---CIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL---LADDIVFSMLKASAAMGYLAP 736
            F+  E++  T  F E       N +G+  F   YKG + + ++VAVK    + + S +  + +F + +K++ + +HENL  L G   S       L+Y ++PNG+LL  L    G+   L W TR  V +G A GI +LH      +H ++ +  +L+ + +   +SD GL +    LA  ++ S +  + A  Y+AP
Sbjct:  168 FSFHELKSITNNFDEQPASAGGNRMGEGGFGVVYKGCVNN-TIVAVKKLGAMVEISTEELKQQFDQEIKVMATCQHENLVELLGF--SSDSDNLCLVYAYMPNGSLLDRLSCLDGTPP-LSWHTRCKVAQGTANGIRFLHENHH--IHRDIKSANILLDKDFTAKISDFGLARASARLAQTVMTSRIVGTTA--YMAP 357          
The following BLAST results are available for this feature:
BLAST of CF835130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 263
Match NameE-valueIdentityDescription
Y5830_ARATH2.112e-1531.25Probable inactive receptor kinase At5g58300 OS=Ara... [more]
CX32_ARATH2.112e-1528.28Probable serine/threonine-protein kinase Cx32, chl... [more]
CLV1_ARATH2.758e-1527.67Receptor protein kinase CLAVATA1 OS=Arabidopsis th... [more]
Y5181_ARATH4.705e-1529.82Probable LRR receptor-like serine/threonine-protei... [more]
Y5169_ARATH4.705e-1533.11Probable LRR receptor-like serine/threonine-protei... [more]
Y5148_ARATH4.705e-1527.57Probable leucine-rich repeat receptor-like protein... [more]
PEPR2_ARATH4.705e-1526.70Leucine-rich repeat receptor-like protein kinase P... [more]
RPK1_IPONI6.145e-1528.49Receptor-like protein kinase OS=Ipomoea nil GN=INR... [more]
KPRO_MAIZE6.145e-1529.79Putative receptor protein kinase ZmPK1 OS=Zea mays... [more]
IRAK4_MOUSE6.145e-1529.29Interleukin-1 receptor-associated kinase 4 OS=Mus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06L14_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06L14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835130 ID=CF835130; Name=CF835130; organism=Citrus sinensis; type=EST; length=737bp
GAAAATTGGAACTGTTTTTGATAATTCAGATAGTCGTCTTAGTACCGACC
ACCTAAAGGAGGTTTGCAGGAGAAATTCTTCCCCACTTATCAGCCTTGAG
TATTCCAATGGATGGGATCCGTTGGCCAAAGGTCAGAGTGGAAATGGGTT
TTCTCAGGAAGTTCTTGAGAGTTTCATGTTTAATTTGGAAGAGGTGGAGC
GAGCAACTCAGTGTTTCTCAGAGGCGAATTTGCTGGGAAAGAGCAGTTTT
TCTGCCACCTACAAAGGGATCCTGAGAGATGGATCAGTTGTTGCTGTAAA
GTGCATTGCCAAGACAAGTTGCAAGTCTGACGAAGGTGAGTTTTTGAAGG
GGCTAAAGATATTGACCTCATTAAAACATGAAAATCTTGCAAGCTTGAGA
GGTATCTGCTGTTCAAAAGGCAGAGGTGAGTGTTTTCTCATCTATGATTT
TGTCCCCAATGGAAACCTCTTACAGCATCTTGATTTAGAGGCAGGCAGTG
AAAAGGTTCTTGAATGGGCTACCAGAATTTCTGTCATAAAGGGAATTGCC
AAAGGGATCAGTTATTTACATGGAAAGAGACCTGGTCTAGTTCACCCGAA
TTTGTCTGCTGAGAAGGTGCTCATTCATAGACGATATAATCCCTTGCTTT
CAGATTCTGGCCTGCACAAACTCCTTGCAGATGATATTGTTTTCTCAATG
CTCAAAGCCAGTGCTGCCATGGGATATCTGGCTCCTG
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