CF835130

Overview
NameCF835130
Unique NameCF835130
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: IRAK4_BOVIN (Interleukin-1 receptor-associated kinase 4 OS=Bos taurus GN=IRAK4 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.025e-15
Identity = 66/240 (27.50%), Postives = 111/240 (46.25%), Query Frame = 2
Query:   56 KEVCRRNSSPLISLEYSNGWDPLAKGQSGNGFSQEVLES--FMFNLEEVERATQCFSE------ANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDE--GEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL---LADDIVFSMLKASAAMGYLAP 736
            K +C ++ + +IS E       L    S    S E  ++    F+  E++  T  F E       N +G+  F   YKG + + +V   K  A     ++E   +F + +K++   +HENL  L G   S G   C L+Y ++PNG+LL  L    G+   L W  R  + +G A G+SYLH      +H ++ +  +L+   +   +SD GL +     A  ++ S +  + A  Y+AP
Sbjct:  126 KPLCGKDRTSVISDENPEQNYVLPDSSSPENTSLEFSDTRFHSFSFFELKDVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNRTVAVKKLAAMVDISTEELKQQFDQEIKVMAKCQHENLVELLGFS-SDGDDLC-LVYVYMPNGSLLDRLSCLDGTPP-LSWNMRCKIAQGAANGLSYLHENHH--IHRDIKSANILLDEDFTAKISDFGLARASEKFAQTVMTSRIVGTTA--YMAP 358          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: Y5188_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.048e-14
Identity = 56/182 (30.77%), Postives = 93/182 (51.10%), Query Frame = 2
Query:  131 GQSGNGFSQEVL-ESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHK 670
            G+S  G +  ++ +       EV + T  F    +LGK  F   Y G L D + VAVK ++ +S +  + EF   +++L  + H NL  L G C         LIY+++ NG+L +++  + G   VL W  R+ +    A+G+ YLH G  P +VH ++    +L++ RY   L+D GL +
Sbjct:  539 GESNKGTNPSIITKERRITYPEVLKMTNNFER--VLGKGGFGTVYHGNLED-TQVAVKMLSHSSAQGYK-EFKAEVELLLRVHHRNLVGLVGYC--DDGDNLALIYEYMANGDLKENMSGKRGGN-VLTWENRMQIAVEAAQGLEYLHNGCTPPMVHRDVKTTNILLNERYGAKLADFGLSR 713          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.048e-14
Identity = 55/194 (28.35%), Postives = 98/194 (50.52%), Query Frame = 2
Query:  161 VLESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHK-LLADDIVFSMLKASAAMGYLAP 736
            V ++  F+  +V   T  F    +LGK  F   Y G +     VAVK ++ +S +  + +F   +++L  + H+NL  L G C  +G     LIY+++ NG+L +H+     +  +L W TR+ ++   A+G+ YLH G +P +VH ++    +L++  +   L+D GL +  L +         +   GYL P
Sbjct:  562 VTKNRRFSYSQVVIMTNNFQR--ILGKGGFGMVYHGFVNGTEQVAVKILSHSSSQGYK-QFKAEVELLLRVHHKNLVGLVGYC-DEG-DNLALIYEYMANGDLKEHMS-GTRNRFILNWGTRLKIVIESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHFEAKLADFGLSRSFLIEGETHVSTVVAGTPGYLDP 749          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: RLK5_ARATH (Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.048e-14
Identity = 58/190 (30.53%), Postives = 95/190 (50.00%), Query Frame = 2
Query:  212 CFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGE----------FLKGLKILTSLKHENLASLRGICCSKGRGEC-FLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHK---LLADDIVFSMLKASAAMGYLAP 736
            C  E N++G  S    YK  LR G VVAVK + K S K  + E          F   ++ L +++H+++  L   CCS G  +C  L+Y+++PNG+L   L  +     VL W  R+ +    A+G+SYLH    P +VH ++ +  +L+   Y   ++D G+ K   +       +M   + + GY+AP
Sbjct:  682 CLDEKNVIGFGSSGKVYKVELRGGEVVAVKKLNK-SVKGGDDEYSSDSLNRDVFAAEVETLGTIRHKSIVRL-WCCCSSG--DCKLLVYEYMPNGSLADVLHGDRKGGVVLGWPERLRIALDAAEGLSYLHHDCVPPIVHRDVKSSNILLDSDYGAKVADFGIAKVGQMSGSKTPEAMSGIAGSCGYIAP 867          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.048e-14
Identity = 50/174 (28.74%), Postives = 83/174 (47.70%), Query Frame = 2
Query:  179 FNLEEVERATQCFSEANLLGKSSFSATYKGILRD----------GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHK 670
            F+  E++ AT+ F   ++LG+  F   +KG + +          G V+AVK + +   +  + E+L  +  L    H +L  L G C         L+Y+F+P G+L  HL       + L W  R+ V  G AKG+++LH     +++ +     +L+   YN  LSD GL K
Sbjct:   56 FSFAELKSATRNFRPDSVLGEGGFGCVFKGWIDEKSLTASRPGTGLVIAVKKLNQDGWQGHQ-EWLAEVNYLGQFSHRHLVKLIGYCLEDEHR--LLVYEFMPRGSLENHLFRRGLYFQPLSWKLRLKVALGAAKGLAFLHSSETRVIYRDFKTSNILLDSEYNAKLSDFGLAK 226          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: ERL2_ARATH (LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.369e-14
Identity = 58/222 (26.13%), Postives = 106/222 (47.75%), Query Frame = 2
Query:   89 ISLEYSNGWDPLAKGQSGN--GFSQEVL---ESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 736
            I++  S    P+ KG S    G ++ V+   +  +   +++ R T+   E  ++G  + S  YK   +    +A+K I      S+  EF   L+ + S++H N+ SL G   S       L YD++ NG+L   L    G +  L+W TR+ +  G A+G++YLH    P ++H ++ +  +L+   +   LSD G+ K +     ++       +GY+ P
Sbjct:  604 IAVYKSKQQKPVLKGSSKQPEGSTKLVILHMDMAIHTFDDIMRVTENLDEKYIIGYGASSTVYKCTSKTSRPIAIKRIYN-QYPSNFREFETELETIGSIRHRNIVSLHGYALSPFGN--LLFYDYMENGSLWDLLH-GPGKKVKLDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSNILLDGNFEARLSDFGIAKSIPATKTYASTYVLGTIGYIDP 821          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.788e-14
Identity = 65/228 (28.51%), Postives = 102/228 (44.74%), Query Frame = 2
Query:   14 VFDNSDSRLSTDHLKEVCRRNSSPLISLEYSNGWDPLAKGQSGNGFSQEVLESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRD----------GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSE-KVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGL 664
            V + S S L   HL   C+ +SS              A    G   S   ++SF FN  E++ AT+ F   +++G+  F   ++G L +          G V+AVK +     +    E+L  +  L  L H NL  L G C    +    L+Y+F+  G+L  HL      + K L W  RI V    AKG+++LH     +++ ++ A  +L+   +N  LSD GL
Sbjct:    9 VLNKSSSGLDDLHLSS-CKSSSSAT------------AHKTEGEILSSTTVKSFSFN--ELKLATRNFRSDSVVGEGGFGCVFRGWLDETTLTPTKSSSGLVIAVKRLNPDGFQGHR-EWLTEINYLGQLSHPNLVKLIGYCLEDEQR--LLVYEFMHKGSLENHLFANGNKDFKPLSWILRIKVALDAAKGLAFLHSDPVKVIYRDIKASNILLDSDFNAKLSDFGL 218          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: Y2242_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g24230 OS=Arabidopsis thaliana GN=At2g24230 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.788e-14
Identity = 69/249 (27.71%), Postives = 106/249 (42.57%), Query Frame = 2
Query:   77 SSPLISLEYSNGWDPLAKGQSGNGFSQEVLESFMFNL--EEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHL-DLEAGSEKVLEWAT-------------------------RISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 736
            S P      S  W  +A  +  N     + E  + N+   ++  AT  F    LL    F   Y+G L  G  VAVK +   S  SD+ E  + L+ L  +KH NL  L G C +  +     IY+++ NGNL   L DL  G +   +W T                         R  +  G A+ +++LH G  P ++H ++ A  V + + + P LSD GL K+  + +   ++  S   GYL P
Sbjct:  500 SGPFSFQTDSTTW--VADVKQANAVPVVIFEKPLLNITFSDLLSATSNFDRDTLLADGKFGPVYRGFLPGGIHVAVKVLVHGSTLSDQ-EAARELEFLGRIKHPNLVPLTGYCIAGDQR--IAIYEYMENGNLQNLLHDLPFGVQTTDDWTTDTWEEETDNGTQNIGTEGPVATWRFRHKIALGTARALAFLHHGCSPPIIHRDVKASSVYLDQNWEPRLSDFGLAKVFGNGLDDEIIHGSP--GYLPP 741          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: ERL1_ARATH (LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.335e-14
Identity = 52/194 (26.80%), Postives = 95/194 (48.97%), Query Frame = 2
Query:  164 LESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKV--LEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 736
            ++  +   +++ R T+  +E  ++G  + S  YK  L+    +A+K +       +  EF   L+ + S++H N+ SL G   S       L YD++ NG+L    DL  GS K   L+W TR+ +  G A+G++YLH    P ++H ++ +  +L+   +   LSD G+ K +      +       +GY+ P
Sbjct:  631 MDMAIHTFDDIMRVTENLNEKFIIGYGASSTVYKCALKSSRPIAIKRLYN-QYPHNLREFETELETIGSIRHRNIVSLHGYALSPTGN--LLFYDYMENGSLW---DLLHGSLKKVKLDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSNILLDENFEAHLSDFGIAKSIPASKTHASTYVLGTIGYIDP 818          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 3.050e-14
Identity = 61/205 (29.76%), Postives = 100/205 (48.78%), Query Frame = 2
Query:  128 KGQSGNGFSQEVLESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVFSMLKASAAMGYLAP 736
            K  + +  S  + +   F   EV + T+ F    +LGK  F   Y G L D + VAVK ++ +S +  + EF   +++L  + H +L  L G C         LIY+++  G+L +++  +  S  VL W TR+ +    A+G+ YLH G RP +VH ++    +L++ R    L+D GL +    D     M   +   GYL P
Sbjct:  543 KSDARSSSSSIITKERKFTYSEVLKMTKNFER--VLGKGGFGTVYHGNL-DDTQVAVKMLSHSSAQGYK-EFKAEVELLLRVHHRHLVGLVGYC--DDGDNLALIYEYMEKGDLRENMSGKH-SVNVLSWETRMQIAVEAAQGLEYLHNGCRPPMVHRDVKPTNILLNERSQAKLADFGLSRSFPVDGESHVMTVVAGTPGYLDP 740          
The following BLAST results are available for this feature:
BLAST of CF835130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 263
Match NameE-valueIdentityDescription
IRAK4_BOVIN8.025e-1527.50Interleukin-1 receptor-associated kinase 4 OS=Bos ... [more]
Y5188_ARATH1.048e-1430.77Probable LRR receptor-like serine/threonine-protei... [more]
Y5182_ARATH1.048e-1428.35Probable LRR receptor-like serine/threonine-protei... [more]
RLK5_ARATH1.048e-1430.53Receptor-like protein kinase 5 OS=Arabidopsis thal... [more]
APK1A_ARATH1.048e-1428.74Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
ERL2_ARATH1.369e-1426.13LRR receptor-like serine/threonine-protein kinase ... [more]
Y3545_ARATH1.788e-1428.51Probable receptor-like protein kinase At3g55450 OS... [more]
Y2242_ARATH1.788e-1427.71Probable LRR receptor-like serine/threonine-protei... [more]
ERL1_ARATH2.335e-1426.80LRR receptor-like serine/threonine-protein kinase ... [more]
Y5189_ARATH3.050e-1429.76Probable LRR receptor-like protein kinase At1g5189... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06L14_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06L14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835130 ID=CF835130; Name=CF835130; organism=Citrus sinensis; type=EST; length=737bp
GAAAATTGGAACTGTTTTTGATAATTCAGATAGTCGTCTTAGTACCGACC
ACCTAAAGGAGGTTTGCAGGAGAAATTCTTCCCCACTTATCAGCCTTGAG
TATTCCAATGGATGGGATCCGTTGGCCAAAGGTCAGAGTGGAAATGGGTT
TTCTCAGGAAGTTCTTGAGAGTTTCATGTTTAATTTGGAAGAGGTGGAGC
GAGCAACTCAGTGTTTCTCAGAGGCGAATTTGCTGGGAAAGAGCAGTTTT
TCTGCCACCTACAAAGGGATCCTGAGAGATGGATCAGTTGTTGCTGTAAA
GTGCATTGCCAAGACAAGTTGCAAGTCTGACGAAGGTGAGTTTTTGAAGG
GGCTAAAGATATTGACCTCATTAAAACATGAAAATCTTGCAAGCTTGAGA
GGTATCTGCTGTTCAAAAGGCAGAGGTGAGTGTTTTCTCATCTATGATTT
TGTCCCCAATGGAAACCTCTTACAGCATCTTGATTTAGAGGCAGGCAGTG
AAAAGGTTCTTGAATGGGCTACCAGAATTTCTGTCATAAAGGGAATTGCC
AAAGGGATCAGTTATTTACATGGAAAGAGACCTGGTCTAGTTCACCCGAA
TTTGTCTGCTGAGAAGGTGCTCATTCATAGACGATATAATCCCTTGCTTT
CAGATTCTGGCCTGCACAAACTCCTTGCAGATGATATTGTTTTCTCAATG
CTCAAAGCCAGTGCTGCCATGGGATATCTGGCTCCTG
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