CF835130
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: TESK2_RAT (Dual specificity testis-specific protein kinase 2 OS=Rattus norvegicus GN=Tesk2 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.182e-11 Identity = 47/154 (30.52%), Postives = 80/154 (51.95%), Query Frame = 2 Query: 233 LGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHR---RYNPLLSDSGLHKLLAD 682 +G FS +K R G V+A+K + S+ LK ++++ L H N+ G+C +G+ + +++ +GNL Q LD S L W R+ + IA G+SYLH K G+ H +L+++ LI R Y+ +++D GL + + D Sbjct: 64 IGSGFFSEVFKVRHRASGQVMALKM---NTLSSNRANLLKEMQLMNRLSHPNILRFMGVCVH--QGQLHALTEYINSGNLEQLLD----SNLYLPWTVRVKLAYDIAVGLSYLHFK--GIFHRDLTSKNCLIKRDENGYSAVVADFGLAEKIPD 206
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: ERBB4_MOUSE (Receptor tyrosine-protein kinase erbB-4 OS=Mus musculus GN=Erbb4 PE=1 SV=3) HSP 1 Score: 67.3958 bits (163), Expect = 9.182e-11 Identity = 53/161 (32.92%), Postives = 82/161 (50.93%), Query Frame = 2 Query: 230 LLGKSSFSATYKGI-LRDGSVV----AVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLL----QHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADD 685 +LG +F YKGI + +G V A+K + +T+ EF+ I+ S+ H +L L G+C S L+ +P+G LL +H D GS+ +L W + IAKG+ YL +R LVH +L+A VL+ + ++D GL +LL D Sbjct: 723 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP---TIQLVTQLMPHGCLLDYVHEHKD-NIGSQLLLNWCVQ------IAKGMMYLEERR--LVHRDLAARNVLVKSPNHVKITDFGLARLLEGD 871
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: ERBB4_HUMAN (Receptor tyrosine-protein kinase erbB-4 OS=Homo sapiens GN=ERBB4 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.182e-11 Identity = 53/161 (32.92%), Postives = 82/161 (50.93%), Query Frame = 2 Query: 230 LLGKSSFSATYKGI-LRDGSVV----AVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLL----QHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADD 685 +LG +F YKGI + +G V A+K + +T+ EF+ I+ S+ H +L L G+C S L+ +P+G LL +H D GS+ +L W + IAKG+ YL +R LVH +L+A VL+ + ++D GL +LL D Sbjct: 723 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP---TIQLVTQLMPHGCLLEYVHEHKD-NIGSQLLLNWCVQ------IAKGMMYLEERR--LVHRDLAARNVLVKSPNHVKITDFGLARLLEGD 871 The following BLAST results are available for this feature:
BLAST of CF835130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 263
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835130 ID=CF835130; Name=CF835130; organism=Citrus sinensis; type=EST; length=737bpback to top |