CF835130

Overview
NameCF835130
Unique NameCF835130
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: CRK14_ARATH (Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana GN=CRK14 PE=2 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.784e-22
Identity = 63/205 (30.73%), Postives = 107/205 (52.20%), Query Frame = 2
Query:  128 KGQSGNGFSQEVLESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA-DDIVFSMLKASAAMGYLAP 736
            K   G+     +  S  F+ + +E AT  FSE+N++G+  F   + G+L +G+ VA+K ++K S +    EF   + ++  L H NL  L G C      E  L+Y+FVPN + L +   +   +  L+W  R ++I+GI +GI YLH   R  ++H +L A  +L+    NP ++D G+ ++   D    +  K +   GY+ P
Sbjct:  308 KSYQGSSTDITITHSLQFDFKAIEDATNKFSESNIIGRGGFGEVFMGVL-NGTEVAIKRLSKAS-RQGAREFKNEVVVVAKLHHRNLVKLLGFCLE--GEEKILVYEFVPNKS-LDYFLFDPTKQGQLDWTKRYNIIRGITRGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGIDQSGANTKKIAGTRGYMPP 507          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: WAKLR_ARATH (Wall-associated receptor kinase-like 21 OS=Arabidopsis thaliana GN=WAKL21 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.330e-22
Identity = 62/190 (32.63%), Postives = 103/190 (54.21%), Query Frame = 2
Query:  179 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL-LADDIVFSMLKAS--AAMGYLAP 736
            +  +E+E+AT  FS+ N+LG  ++   Y G   + S VA+K +      S + + +  +K+L+S+ H NL  L G C + G  E FL+Y+F+PNG L QHL  E G +  L W  R+++    A  I++LH    P + H ++ +  +L+   +N  +SD GL +L ++ D   S +  +     GYL P
Sbjct:  300 YTYKEIEKATDSFSDKNMLGTGAYGTVYAGEFPNSSCVAIKRLKHKDTTSID-QVVNEIKLLSSVSHPNLVRLLGCCFADG--EPFLVYEFMPNGTLYQHLQHERG-QPPLSWQLRLAIACQTANAIAHLHSSVNPPIYHRDIKSSNILLDHEFNSKISDFGLSRLGMSTDFEASHISTAPQGTPGYLDP 485          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.974e-22
Identity = 61/187 (32.62%), Postives = 99/187 (52.94%), Query Frame = 2
Query:  179 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 736
            F+  E++ AT  FS  N+LG+  F   YKG L +G+VVAVK + K    + E +F   ++++    H NL  L G C +    E  L+Y ++PNG++   L    G +  L+W  RIS+  G A+G+ YLH +  P ++H ++ A  +L+   +  ++ D GL KLL              +G++AP
Sbjct:  288 FSFREIQTATSNFSPKNILGQGGFGMVYKGYLPNGTVVAVKRL-KDPIYTGEVQFQTEVEMIGLAVHRNLLRLFGFCMTP--EERMLVYPYMPNGSVADRLRDNYGEKPSLDWNRRISIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESFEAIVGDFGLAKLLDQRDSHVTTAVRGTIGHIAP 471          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 3.974e-22
Identity = 59/187 (31.55%), Postives = 99/187 (52.94%), Query Frame = 2
Query:  179 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 736
            F+L E++ A+  FS  N+LG+  F   YKG L DG++VAVK + +      E +F   +++++   H NL  LRG C +    E  L+Y ++ NG++   L     S+  L+W TR  +  G A+G+SYLH    P ++H ++ A  +L+   +  ++ D GL KL+              +G++AP
Sbjct:  290 FSLRELQVASDGFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTP--TERLLVYPYMANGSVASCLRERPPSQPPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 474          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 3.974e-22
Identity = 65/189 (34.39%), Postives = 104/189 (55.03%), Query Frame = 2
Query:  179 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPG--LVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADD-IVFSMLKASAAMGYLAP 736
            F LE +E+AT+ +    L+G+  F + Y+G L DG  VAVK  + TS +    EF   L +L++++HENL  L G C      +  L+Y F+ NG+LL  L  EA   K+L+W TR+S+  G A+G++YLH   PG  ++H ++ +  +L+ +     ++D G  K    +   +  L+     GYL P
Sbjct:  586 FTLEYIEQATEQYK--TLIGEGGFGSVYRGTLDDGQEVAVKVRSSTSTQGTR-EFDNELNLLSAIQHENLVPLLGYC--NEYDQQILVYPFMSNGSLLDRLYGEASKRKILDWPTRLSIALGAARGLAYLH-TFPGRSVIHRDVKSSNILLDQSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDP 768          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 3.974e-22
Identity = 65/169 (38.46%), Postives = 96/169 (56.80%), Query Frame = 2
Query:  167 ESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEG--EFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGL 664
            +S +++ + +E AT  FS +N LG+  F A YKG L +G+ VAVK ++K   KS +G  EF     ++T L+H NL  L G C    R E  LIY+FV N + L +   +   +  L+W  R  +I GIA+GI YLH   R  ++H +L A  +L+    NP ++D GL
Sbjct:  334 DSLVYDFKTIEAATNKFSTSNKLGEGGFGAVYKGKLSNGTDVAVKRLSK---KSGQGTREFRNEAVLVTKLQHRNLVRLLGFCLE--REEQILIYEFVHNKS-LDYFLFDPEKQSQLDWTRRYKIIGGIARGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGL 496          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.778e-22
Identity = 61/170 (35.88%), Postives = 97/170 (57.06%), Query Frame = 2
Query:  179 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKR-PGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADD 685
            +N  E++ AT  FS+ + +G+  +   YKG L  G VVAVK   + S +  + EF   +++L+ L H NL SL G C  K  GE  L+Y+++PNG+L     L A   + L  A R+ +  G A+GI YLH +  P ++H ++    +L+  + NP ++D G+ KL+A D
Sbjct:  619 YNFTELDSATSSFSDLSQIGRGGYGKVYKGHLPGGLVVAVKRAEQGSLQGQK-EFFTEIELLSRLHHRNLVSLLGYCDQK--GEQMLVYEYMPNGSLQD--ALSARFRQPLSLALRLRIALGSARGILYLHTEADPPIIHRDIKPSNILLDSKMNPKVADFGISKLIALD 783          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: IMK3_ARATH (Probable leucine-rich repeat receptor-like protein kinase IMK3 OS=Arabidopsis thaliana GN=IMK3 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.852e-22
Identity = 59/171 (34.50%), Postives = 97/171 (56.73%), Query Frame = 2
Query:  224 ANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 736
            A ++GKS++   YK  L DGS VAVK + +   KS + EF   + +L  ++H NL +LR       +GE  +++D++  G+L   L    G +  + W TR+S+IKG+A+G+ YLH     ++H NL++  VL+       +SD GL +L+      S++  + A+GY AP
Sbjct:  491 AEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKSQK-EFENEINVLGRIRHPNLLALRAYYLGP-KGEKLVVFDYMSRGSLATFLHAR-GPDVHINWPTRMSLIKGMARGLFYLH-THANIIHGNLTSSNVLLDENITAKISDYGLSRLMTAAAGSSVIATAGALGYRAP 657          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.156e-21
Identity = 60/193 (31.09%), Postives = 101/193 (52.33%), Query Frame = 2
Query:  161 VLESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPG-LVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 736
            V ++ +F+  E+E+AT+ FS   +LG+      YKG+L DG +VAVK  +K   +    EF+  + IL+ + H N+  L G CC + +    L+Y+F+PNGNL +HL  E     +  W  R+ +   IA  +SYLH      + H ++ +  +++  +Y   +SD G  + +  D        S  +GY+ P
Sbjct:  429 VEKTIVFSSRELEKATENFSSNRILGQGGQGTVYKGMLVDGRIVAVKK-SKVVDEDKLEEFINEVVILSQINHRNIVKLLG-CCLETKVPV-LVYEFIPNGNLFEHLHDEFDENIMATWNIRLRIAIDIAGALSYLHSSASSPIYHRDVKSTNIMLDEKYRAKVSDFGTSRTVTVDHTHLTTVVSGTVGYMDP 618          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.156e-21
Identity = 58/187 (31.02%), Postives = 98/187 (52.41%), Query Frame = 2
Query:  179 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 736
            F+L E++ AT  FS  N+LG+  F   YKG L DG++VAVK + +      E +F   +++++   H NL  LRG C +    E  L+Y ++ NG++   L     S+  L W+ R  +  G A+G+SYLH    P ++H ++ A  +L+   +  ++ D GL +L+              +G++AP
Sbjct:  293 FSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTP--TERLLVYPYMANGSVASCLRERPPSQLPLAWSIRQQIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLARLMDYKDTHVTTAVRGTIGHIAP 477          
The following BLAST results are available for this feature:
BLAST of CF835130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 263
Match NameE-valueIdentityDescription
CRK14_ARATH1.784e-2230.73Cysteine-rich receptor-like protein kinase 14 OS=A... [more]
WAKLR_ARATH2.330e-2232.63Wall-associated receptor kinase-like 21 OS=Arabido... [more]
Y5457_ARATH3.974e-2232.62Probable LRR receptor-like serine/threonine-protei... [more]
SERK1_ARATH3.974e-2231.55Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
NORK_MEDTR3.974e-2234.39Nodulation receptor kinase OS=Medicago truncatula ... [more]
CRK11_ARATH3.974e-2238.46Cysteine-rich receptor-like protein kinase 11 OS=A... [more]
Y5374_ARATH6.778e-2235.88Probable LRR receptor-like serine/threonine-protei... [more]
IMK3_ARATH8.852e-2234.50Probable leucine-rich repeat receptor-like protein... [more]
WAKLH_ARATH1.156e-2131.09Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
SERK2_ARATH1.156e-2131.02Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_06L14_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06L14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835130 ID=CF835130; Name=CF835130; organism=Citrus sinensis; type=EST; length=737bp
GAAAATTGGAACTGTTTTTGATAATTCAGATAGTCGTCTTAGTACCGACC
ACCTAAAGGAGGTTTGCAGGAGAAATTCTTCCCCACTTATCAGCCTTGAG
TATTCCAATGGATGGGATCCGTTGGCCAAAGGTCAGAGTGGAAATGGGTT
TTCTCAGGAAGTTCTTGAGAGTTTCATGTTTAATTTGGAAGAGGTGGAGC
GAGCAACTCAGTGTTTCTCAGAGGCGAATTTGCTGGGAAAGAGCAGTTTT
TCTGCCACCTACAAAGGGATCCTGAGAGATGGATCAGTTGTTGCTGTAAA
GTGCATTGCCAAGACAAGTTGCAAGTCTGACGAAGGTGAGTTTTTGAAGG
GGCTAAAGATATTGACCTCATTAAAACATGAAAATCTTGCAAGCTTGAGA
GGTATCTGCTGTTCAAAAGGCAGAGGTGAGTGTTTTCTCATCTATGATTT
TGTCCCCAATGGAAACCTCTTACAGCATCTTGATTTAGAGGCAGGCAGTG
AAAAGGTTCTTGAATGGGCTACCAGAATTTCTGTCATAAAGGGAATTGCC
AAAGGGATCAGTTATTTACATGGAAAGAGACCTGGTCTAGTTCACCCGAA
TTTGTCTGCTGAGAAGGTGCTCATTCATAGACGATATAATCCCTTGCTTT
CAGATTCTGGCCTGCACAAACTCCTTGCAGATGATATTGTTTTCTCAATG
CTCAAAGCCAGTGCTGCCATGGGATATCTGGCTCCTG
back to top