CF835130

Overview
NameCF835130
Unique NameCF835130
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: SRF7_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana GN=SRF7 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.278e-20
Identity = 57/168 (33.93%), Postives = 88/168 (52.38%), Query Frame = 2
Query:  179 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEG-EFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL 676
            + + +++ AT  FS  NLLG+ +F   Y+    DG V+AVK I  ++  +D   +F + +  +  L HEN+  L G C     G+  ++Y+F  NG+L   L L     K L W  R+ +  G A+ + YLH    P +VH N+ +  +L+    NP LSDSGL   L
Sbjct:  407 YTVSDLQVATNSFSVDNLLGEGTFGRVYRAQFEDGKVLAVKKIDSSALPTDTADDFTEIVSKIAHLDHENVTKLDGYCSE--HGQHLVVYEFHRNGSLHDFLHLAEEESKPLIWNPRVKIALGTARALEYLHEVCSPSIVHKNIKSANILLDSELNPHLSDSGLASFL 572          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 100.138 bits (248), Expect = 1.278e-20
Identity = 58/179 (32.40%), Postives = 93/179 (51.96%), Query Frame = 2
Query:  203 ATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 736
            +T  F +AN++G   F   YK  L DG  VA+K ++   C   E EF   ++ L+  +H NL  LRG C  K   +  LIY ++ NG+L   L        +L+W TR+ + +G AKG+ YLH G  P ++H ++ +  +L+   +N  L+D GL +L++             +GY+ P
Sbjct:  730 STNSFDQANIIGCGGFGMVYKATLPDGKKVAIKKLSG-DCGQIEREFEAEVETLSRAQHPNLVLLRGFCFYKN--DRLLIYSYMENGSLDYWLHERNDGPALLKWKTRLRIAQGAAKGLLYLHEGCDPHILHRDIKSSNILLDENFNSHLADFGLARLMSPYETHVSTDLVGTLGYIPP 905          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.278e-20
Identity = 61/187 (32.62%), Postives = 101/187 (54.01%), Query Frame = 2
Query:  182 NLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA-DDIVFSMLKASAAMGYLAP 736
            + + +E AT+ F++ N LG+  F   YKG L +G+ VAVK ++KTS +    EF   + ++  L+H NL  L G C      E  L+Y+FVPN + L +   +   +  L+W  R ++I GI +GI YLH   R  ++H +L A  +L+     P ++D G+ ++   D  V +  + +   GY+ P
Sbjct:  356 DFKTIEVATENFAKTNKLGQGGFGEVYKGTLVNGTEVAVKRLSKTS-EQGAQEFKNEVVLVAKLQHRNLVKLLGYCLEP--EEKILVYEFVPNKS-LDYFLFDPTKQGQLDWTKRYNIIGGITRGILYLHQDSRLTIIHRDLKASNILLDADMIPKIADFGMARISGIDQSVANTKRIAGTFGYMPP 538          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.669e-20
Identity = 59/197 (29.95%), Postives = 104/197 (52.79%), Query Frame = 2
Query:  149 FSQEVLESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYL-HGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 736
            F Q +L+     L ++  AT  FS+ N++G   F   YK  L     VAVK +++   + +  EF+  ++ L  +KH NL SL G C      E  L+Y+++ NG+L   L  + G  +VL+W+ R+ +  G A+G+++L HG  P ++H ++ A  +L+   + P ++D GL +L++          +   GY+ P
Sbjct:  898 FEQPLLK---VRLGDIVEATDHFSKKNIIGDGGFGTVYKACLPGEKTVAVKKLSEAKTQGNR-EFMAEMETLGKVKHPNLVSLLGYCSFSE--EKLLVYEYMVNGSLDHWLRNQTGMLEVLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRDIKASNILLDGDFEPKVADFGLARLISACESHVSTVIAGTFGYIPP 1088          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: CRK6_ARATH (Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana GN=CRK6 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.669e-20
Identity = 62/199 (31.16%), Postives = 102/199 (51.26%), Query Frame = 2
Query:  146 GFSQEVLESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA-DDIVFSMLKASAAMGYLAP 736
            G      +S   +   ++ AT  F+E+N +G+  F   YKG   +G  VAVK ++K S +  E EF   + ++  L+H NL  L G   S    E  L+Y+++PN + L  L  +   +  L+W  R ++I GIA+GI YLH   R  ++H +L A  +L+    NP ++D G+ ++   D    +  +     GY+AP
Sbjct:  328 GDDMATADSLQLDYRTIQTATNDFAESNKIGRGGFGEVYKGTFSNGKEVAVKRLSKNS-RQGEAEFKTEVVVVAKLQHRNLVRLLGF--SLQGEERILVYEYMPNKS-LDCLLFDPTKQIQLDWMQRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADINPKIADFGMARIFGLDQTQDNTSRIVGTYGYMAP 522          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.180e-20
Identity = 63/194 (32.47%), Postives = 104/194 (53.61%), Query Frame = 2
Query:  170 SFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKC-IAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLAD---DIVFSMLKASAAMGYLAP 736
            S +F+ +E++ AT+ F E  ++G+ SF A Y+G L DG  VAVK    +T   +D   F+  + +L+ ++H+NL S  G C    R    L+Y+++  G+L  HL         L W +R+ V    AKG+ YLH G  P ++H ++ +  +L+ +  N  +SD GL K         + +++K +A  GYL P
Sbjct:  593 SRIFSHKEIKSATRNFKE--VIGRGSFGAVYRGKLPDGKQVAVKVRFDRTQLGADS--FINEVHLLSQIRHQNLVSFEGFCYEPKRQ--ILVYEYLSGGSLADHLYGPRSKRHSLNWVSRLKVAVDAAKGLDYLHNGSEPRIIHRDVKSSNILLDKDMNAKVSDFGLSKQFTKADASHITTVVKGTA--GYLDP 778          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.180e-20
Identity = 59/187 (31.55%), Postives = 94/187 (50.27%), Query Frame = 2
Query:  179 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 736
            F   E++ AT  FSE N+LG+  F   YKG+L D + VAVK +        +  F + +++++   H NL  L G C +  + E  L+Y F+ N +L   L      + VL+W TR  +  G A+G  YLH    P ++H ++ A  VL+   +  ++ D GL KL+         +    MG++AP
Sbjct:  278 FAWRELQLATDNFSEKNVLGQGGFGKVYKGVLPDNTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTT--QTERLLVYPFMQNLSLAHRLREIKAGDPVLDWETRKRIALGAARGFEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRRTNVTTQVRGTMGHIAP 462          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: WAKLK_ARATH (Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 2.180e-20
Identity = 60/188 (31.91%), Postives = 97/188 (51.60%), Query Frame = 2
Query:  176 MFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPG-LVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 736
            +F+  E+E+AT  FSE+ +LG+      YKG+L DG  VAVK  +K   +    EF+  + IL+ + H ++  L G CC +      L+Y+F+PNGNL QH+  E   +    W  R+ +   IA  +SYLH      + H ++ +  +L+  +Y   +SD G  + +  D        S  +GY+ P
Sbjct:  438 IFSSRELEKATDNFSESRILGQGGQGTVYKGMLVDGRTVAVK-KSKVVDEDKLEEFINEVVILSQINHRHVVKLLG-CCLETEVPT-LVYEFIPNGNLFQHIH-EESDDYTKTWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRTKVSDFGTSRSVTIDHTHWTTVISGTVGYVDP 621          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: LRKA1_ARATH (Lectin-domain containing receptor kinase A4.1 OS=Arabidopsis thaliana GN=LECRKA4.1 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.180e-20
Identity = 62/180 (34.44%), Postives = 94/180 (52.22%), Query Frame = 2
Query:  203 ATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHL-DLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLV-HPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 736
            AT  F +  ++G   F   +KG L +   +AVK I  +S +    EF+  ++ L  L+H+NL +L+G C  K + +  LIYD++PNG+L   L  +   S  VL W  R  + KGIA G+ YLH +   +V H ++    VLI  + NP L D GL +L     +         +GY+AP
Sbjct:  363 ATDGFKKTGIIGTGGFGTVFKGKLPNSDPIAVKKIIPSS-RQGVREFVAEIESLGKLRHKNLVNLQGWC--KHKNDLLLIYDYIPNGSLDSLLYTVPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEKIVIHRDVKPSNVLIDSKMNPRLGDFGLARLYERGTLSETTALVGTIGYMAP 539          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.180e-20
Identity = 63/187 (33.69%), Postives = 103/187 (55.08%), Query Frame = 2
Query:  179 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 736
            ++ +++ +  +  +E +++G   F   YK  + DG V A+K I K +   D   F + L+IL S+KH  L +LRG C S       L+YD++P G+L + L  E G +  L+W +R+++I G AKG+SYLH    P ++H ++ +  +L+       +SD GL KLL D+        +   GYLAP
Sbjct:  294 YSSKDIIKKLEMLNEEHIIGCGGFGTVYKLAMDDGKVFALKRILKLNEGFDRF-FERELEILGSIKHRYLVNLRGYCNSPTSK--LLLYDYLPGGSLDEALH-ERGEQ--LDWDSRVNIIIGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAP 474          
The following BLAST results are available for this feature:
BLAST of CF835130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 263
Match NameE-valueIdentityDescription
SRF7_ARATH1.278e-2033.93Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsi... [more]
PSKR1_ARATH1.278e-2032.40Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
CRK12_ARATH1.278e-2032.62Putative cysteine-rich receptor-like protein kinas... [more]
EXS_ARATH1.669e-2029.95Leucine-rich repeat receptor protein kinase EXS OS... [more]
CRK6_ARATH1.669e-2031.16Cysteine-rich receptor-like protein kinase 6 OS=Ar... [more]
Y5487_ARATH2.180e-2032.47Probable LRR receptor-like serine/threonine-protei... [more]
Y5129_ARATH2.180e-2031.55Probable LRR receptor-like serine/threonine-protei... [more]
WAKLK_ARATH2.180e-2031.91Putative wall-associated receptor kinase-like 11 O... [more]
LRKA1_ARATH2.180e-2034.44Lectin-domain containing receptor kinase A4.1 OS=A... [more]
FEI1_ARATH2.180e-2033.69LRR receptor-like serine/threonine-protein kinase ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06L14_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06L14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835130 ID=CF835130; Name=CF835130; organism=Citrus sinensis; type=EST; length=737bp
GAAAATTGGAACTGTTTTTGATAATTCAGATAGTCGTCTTAGTACCGACC
ACCTAAAGGAGGTTTGCAGGAGAAATTCTTCCCCACTTATCAGCCTTGAG
TATTCCAATGGATGGGATCCGTTGGCCAAAGGTCAGAGTGGAAATGGGTT
TTCTCAGGAAGTTCTTGAGAGTTTCATGTTTAATTTGGAAGAGGTGGAGC
GAGCAACTCAGTGTTTCTCAGAGGCGAATTTGCTGGGAAAGAGCAGTTTT
TCTGCCACCTACAAAGGGATCCTGAGAGATGGATCAGTTGTTGCTGTAAA
GTGCATTGCCAAGACAAGTTGCAAGTCTGACGAAGGTGAGTTTTTGAAGG
GGCTAAAGATATTGACCTCATTAAAACATGAAAATCTTGCAAGCTTGAGA
GGTATCTGCTGTTCAAAAGGCAGAGGTGAGTGTTTTCTCATCTATGATTT
TGTCCCCAATGGAAACCTCTTACAGCATCTTGATTTAGAGGCAGGCAGTG
AAAAGGTTCTTGAATGGGCTACCAGAATTTCTGTCATAAAGGGAATTGCC
AAAGGGATCAGTTATTTACATGGAAAGAGACCTGGTCTAGTTCACCCGAA
TTTGTCTGCTGAGAAGGTGCTCATTCATAGACGATATAATCCCTTGCTTT
CAGATTCTGGCCTGCACAAACTCCTTGCAGATGATATTGTTTTCTCAATG
CTCAAAGCCAGTGCTGCCATGGGATATCTGGCTCCTG
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