CF835130

Overview
NameCF835130
Unique NameCF835130
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: Y5838_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana GN=At5g48380 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.413e-19
Identity = 63/199 (31.66%), Postives = 105/199 (52.76%), Query Frame = 2
Query:  107 NGWDPLAKGQSGNGFSQEVLESFMFN-------LEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLD-LEAGSEKVLEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL 676
            N W    KGQ G       ++ FMF        L ++ +AT+ F + N++        YKG L DGS++ +K +  +  +  E EF   +K L S+K+ NL  L G C +    E  L+Y+++ NG L   L   +  S K L+W +R+ +  G AKG+++LH    P ++H N+S++ +L+   + P +SD GL +L+
Sbjct:  267 NRWAKSLKGQKG-------VKVFMFKKSVSKMKLSDLMKATEEFKKDNIIATGRTGTMYKGRLEDGSLLMIKRLQDS--QRSEKEFDAEMKTLGSVKNRNLVPLLGYCVANK--ERLLMYEYMANGYLYDQLHPADEESFKPLDWPSRLKIAIGTAKGLAWLHHSCNPRIIHRNISSKCILLTAEFEPKISDFGLARLM 454          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.413e-19
Identity = 57/187 (30.48%), Postives = 97/187 (51.87%), Query Frame = 2
Query:  179 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 736
            F+L E+  AT+ FS+ N+LGK  F   YKG L D ++VAVK + +   K  E +F   +++++   H NL  LRG C +    E  L+Y ++ NG++   L         L+W  R  +  G A+G++YLH      ++H ++ A  +L+   +  ++ D GL KL+  +           +G++AP
Sbjct:  263 FSLRELLVATEKFSKRNVLGKGRFGILYKGRLADDTLVAVKRLNEERTKGGELQFQTEVEMISMAVHRNLLRLRGFCMTP--TERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHLDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAP 447          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: CRK21_ARATH (Cysteine-rich receptor-like protein kinase 21 OS=Arabidopsis thaliana GN=CRK21 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.413e-19
Identity = 59/166 (35.54%), Postives = 91/166 (54.82%), Query Frame = 2
Query:  170 SFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGL 664
            S  F+   ++ AT  F ++N LG   F A YKG+  +G+ VA K ++K S +  E EF   + ++  L+H+NL  L G   S    E  L+Y+FVPN +L  H   +      L+W  R ++I+GI +GI YLH   R  ++H +L A  +L+    NP ++D GL
Sbjct:  348 SLRFDFRAIKAATSNFHKSNKLGHGGFGAVYKGMFPNGTEVAAKRLSKPSDQG-EPEFKNEVLLVARLQHKNLVGLLGF--SVEGEEKILVYEFVPNKSL-DHFLFDPIKRVQLDWPRRHNIIEGITRGILYLHQDSRLTIIHRDLKASNILLDAEMNPKIADFGL 509          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: SUB_ARATH (Protein STRUBBELIG OS=Arabidopsis thaliana GN=SUB PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.846e-19
Identity = 60/189 (31.75%), Postives = 99/189 (52.38%), Query Frame = 2
Query:  176 MFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSD-EGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 736
            +F +  +++ T  FSE N++G+ S    Y+  LR G  +AVK ++ T  ++  +GEFL  +  +  LK  ++  L G C     G+  L+Y++ PNG+L   L L+    K L W  RI++  G +K + +LH   +P +VH N  + KVL+  + +  ++DSGL  +L           S   GY AP
Sbjct:  484 VFTIASLQQYTNNFSEENIIGEGSIGNVYRAELRHGKFLAVKKLSNTINRTQSDGEFLNLVSNVLKLKRGHILELLGYC--NEFGQRLLVYEYCPNGSLQDALHLDRKLHKKLTWNVRINIALGASKALQFLHEVCQPPVVHQNFKSSKVLLDGKLSVRVADSGLAYMLPP------RPTSQMAGYAAP 664          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: SRF2_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsis thaliana GN=SRF2 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.846e-19
Identity = 65/213 (30.52%), Postives = 105/213 (49.30%), Query Frame = 2
Query:  116 DPLAKGQSGNGFSQEVLESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCK-SDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAA----MGYLAP 736
            D  A+ +S +   Q    + +F+  E++ AT CFSE NLLG+    + Y+  L DG    V+ I  +S    +E +F + L+  + L+H N+ +L G C     GE  L+Y++V  G+L  +  +     K L W  R+ +  G+A+ + YLH    P + H +L A  +L+     P ++D GL  L         L+AS       GY+AP
Sbjct:  382 DKSARRKSFSATCQYPSFAKLFSAAELQLATNCFSEENLLGEGPLGSVYRAKLPDGQFAVVRNIPMSSLSLHEEEQFTEVLQTASKLRHPNIVTLLGFCIE--NGEHLLVYEYV--GHLSLYNAMHDEVYKPLSWGLRLRIAIGVARALDYLHSSFCPPIAHSDLKATNILLDEELTPRIADCGLASLRPLTSNSVKLRASEIAIQNTGYIAP 590          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.846e-19
Identity = 60/184 (32.61%), Postives = 100/184 (54.35%), Query Frame = 2
Query:  188 EEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 736
            +++ +  +  +E +++G   F   YK  + DG+V A+K I K +   D   F + L+IL S+KH  L +LRG C S       L+YD++P G+L + L       + L+W +R+++I G AKG++YLH    P ++H ++ +  +L+       +SD GL KLL D+        +   GYLAP
Sbjct:  295 KDIIKKLESLNEEHIIGCGGFGTVYKLSMDDGNVFALKRIVKLNEGFDRF-FERELEILGSIKHRYLVNLRGYCNSPTSK--LLLYDYLPGGSLDEALHKRG---EQLDWDSRVNIIIGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAP 472          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.411e-19
Identity = 57/187 (30.48%), Postives = 94/187 (50.27%), Query Frame = 2
Query:  179 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 736
            F   E+  AT  FS  ++LG   F   Y+G   DG+VVAVK +   +  S   +F   L++++   H NL  L G C S    E  L+Y ++ NG++   L     ++  L+W TR  +  G A+G+ YLH +  P ++H ++ A  +L+   +  ++ D GL KLL  +           +G++AP
Sbjct:  287 FTFRELHVATDGFSSKSILGAGGFGNVYRGKFGDGTVVAVKRLKDVNGTSGNSQFRTELEMISLAVHRNLLRLIGYCASS--SERLLVYPYMSNGSVASRLK----AKPALDWNTRKKIAIGAARGLFYLHEQCDPKIIHRDVKAANILLDEYFEAVVGDFGLAKLLNHEDSHVTTAVRGTVGHIAP 467          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: WAKLM_ARATH (Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana GN=WAKL17 PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.411e-19
Identity = 57/188 (30.32%), Postives = 96/188 (51.06%), Query Frame = 2
Query:  176 MFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPG-LVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 736
            +F  +E+E+AT+ FSE  +LG       YKG+L DG  VAVK  +K   +    EF+  + IL+ + H ++  L G CC +      L+Y+F+ NGNL +H+  E   +  + W  R+ +   IA  +SYLH      + H ++ +  +L+  +Y   ++D G  + +  D        S  +GY+ P
Sbjct:  431 IFTSKELEKATENFSENRVLGHGGQGTVYKGMLVDGRTVAVKK-SKVIDEDKLQEFINEVVILSQINHRHVVKLLG-CCLETEVP-ILVYEFIINGNLFKHIHEEEADDYTMIWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRAKVADFGTSRSVTIDQTHWTTVISGTVGYVDP 615          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: CRK43_ARATH (Putative cysteine-rich receptor-like protein kinase 43 OS=Arabidopsis thaliana GN=CRK43 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.149e-19
Identity = 59/192 (30.73%), Postives = 101/192 (52.60%), Query Frame = 2
Query:  179 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLAD---DIVFSMLKASA---AMGYLAP 736
            F    +++AT  F+E+  LG   +   +KG L DG  +A+K +   S K    E    + +++  +H+NL  L G C +      F++Y+F+ N + L H+      +K L+W  R ++I G A+G+ YLH +   ++H ++ A  +L+  +Y P +SD GL K   +   DI  S L  S+    +GY+AP
Sbjct:  319 FEYSTLKKATNNFNESCKLGVGGYGEVFKGTLSDGREIAIKRL-HVSGKKPRDEIHNEIDVISRCQHKNLVRLLGCCFTNMNS--FIVYEFLANTS-LDHILFNPEKKKELDWKKRRTIILGTAEGLEYLH-ETCKIIHRDIKASNILLDLKYKPKISDFGLAKFYPEGGKDIPASSLSPSSIAGTLGYMAP 505          
BLAST of CF835130 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.371e-19
Identity = 65/192 (33.85%), Postives = 99/192 (51.56%), Query Frame = 2
Query:  179 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEG--EFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL---LADDIVFSMLKASAAMGYLAP 736
            F  +E+  AT  F E++LLG   F   YKG L DG+ VAVK   + + +S++G  EF   +++L+ L+H +L SL G C    R E  L+Y+++ NG L  H  L       L W  R+ +  G A+G+ YLH G    ++H ++    +L+       ++D GL K    L    V + +K S   GYL P
Sbjct:  498 FMFQEIMDATNKFDESSLLGVGGFGRVYKGTLEDGTKVAVK---RGNPRSEQGMAEFRTEIEMLSKLRHRHLVSLIGYC--DERSEMILVYEYMANGPLRSH--LYGADLPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDENLVAKVADFGLSKTGPSLDQTHVSTAVKGS--FGYLDP 680          
The following BLAST results are available for this feature:
BLAST of CF835130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 263
Match NameE-valueIdentityDescription
Y5838_ARATH1.413e-1931.66Probably inactive leucine-rich repeat receptor-lik... [more]
SERK5_ARATH1.413e-1930.48Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
CRK21_ARATH1.413e-1935.54Cysteine-rich receptor-like protein kinase 21 OS=A... [more]
SUB_ARATH1.846e-1931.75Protein STRUBBELIG OS=Arabidopsis thaliana GN=SUB ... [more]
SRF2_ARATH1.846e-1930.52Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsi... [more]
FEI2_ARATH1.846e-1932.61LRR receptor-like serine/threonine-protein kinase ... [more]
Y2239_ARATH2.411e-1930.48Probable LRR receptor-like serine/threonine-protei... [more]
WAKLM_ARATH2.411e-1930.32Wall-associated receptor kinase-like 17 OS=Arabido... [more]
CRK43_ARATH3.149e-1930.73Putative cysteine-rich receptor-like protein kinas... [more]
THE1_ARATH5.371e-1933.85Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06L14_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06L14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835130 ID=CF835130; Name=CF835130; organism=Citrus sinensis; type=EST; length=737bp
GAAAATTGGAACTGTTTTTGATAATTCAGATAGTCGTCTTAGTACCGACC
ACCTAAAGGAGGTTTGCAGGAGAAATTCTTCCCCACTTATCAGCCTTGAG
TATTCCAATGGATGGGATCCGTTGGCCAAAGGTCAGAGTGGAAATGGGTT
TTCTCAGGAAGTTCTTGAGAGTTTCATGTTTAATTTGGAAGAGGTGGAGC
GAGCAACTCAGTGTTTCTCAGAGGCGAATTTGCTGGGAAAGAGCAGTTTT
TCTGCCACCTACAAAGGGATCCTGAGAGATGGATCAGTTGTTGCTGTAAA
GTGCATTGCCAAGACAAGTTGCAAGTCTGACGAAGGTGAGTTTTTGAAGG
GGCTAAAGATATTGACCTCATTAAAACATGAAAATCTTGCAAGCTTGAGA
GGTATCTGCTGTTCAAAAGGCAGAGGTGAGTGTTTTCTCATCTATGATTT
TGTCCCCAATGGAAACCTCTTACAGCATCTTGATTTAGAGGCAGGCAGTG
AAAAGGTTCTTGAATGGGCTACCAGAATTTCTGTCATAAAGGGAATTGCC
AAAGGGATCAGTTATTTACATGGAAAGAGACCTGGTCTAGTTCACCCGAA
TTTGTCTGCTGAGAAGGTGCTCATTCATAGACGATATAATCCCTTGCTTT
CAGATTCTGGCCTGCACAAACTCCTTGCAGATGATATTGTTTTCTCAATG
CTCAAAGCCAGTGCTGCCATGGGATATCTGGCTCCTG
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