CF835132

Overview
NameCF835132
Unique NameCF835132
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length673
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835132 vs. ExPASy Swiss-Prot
Match: CRK37_ARATH (Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana GN=CRK37 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.096e-20
Identity = 62/186 (33.33%), Postives = 97/186 (52.15%), Query Frame = 3
Query:  135 KRQSGNVFSQEVLES------FMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKLESLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATTISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGL 671
            KR+  +    +V +S        F+L  +  AT  FS  N LG+  F + YKGIL  G  +AVK + K S +    EF   + +LT L+  +L  L G C  K   E  L+Y+FVPN + L H   +    +VL W    ++I+G+A+G+ YLH   +  ++H +L A  +L+    NP ++D G+
Sbjct:  310 KRKQSHTIINDVFDSNNGQSMLRFDLRMIVTATNNFSLENKLGQGGFGSVYKGILPSGQEIAVKRLRKGSGQGGM-EFKNEVLLLTRLQHRNLVKLLGFCNEK--DEEILVYEFVPNSS-LDHFIFDEEKRRVLTWDVRYTIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVADFGM 491          
BLAST of CF835132 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 5.349e-20
Identity = 63/187 (33.69%), Postives = 106/187 (56.68%), Query Frame = 3
Query:  129 LAKRQSGNVFSQEVL----ESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKLESLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKV-LEWATTISVIKGIAKGISYLHGKRP-GLVHPNLSAEKVLIHRRYNPLLSDSGL 671
            + KR+      +E+L    + ++F   E++ ATQ F  +N LG+  F   YKG L DG VVAVK ++  S +  +G+F+  +  ++S+   +L  L G CC +G     L+Y+++PNG+L Q L    G + + L+W+T   +  G+A+G+ YLH +    +VH ++ A  +L+  R  P +SD GL
Sbjct:  659 IRKRRKRYTDDEELLGMDVKPYIFTYSELKSATQDFDPSNKLGEGGFGPVYKGNLNDGRVVAVKLLSVGS-RQGKGQFVAEIVAISSVLHRNLVKLYG-CCFEGEHR-MLVYEYLPNGSLDQAL---FGDKTLHLDWSTRYEICLGVARGLVYLHEEASVRIVHRDVKASNILLDSRLVPQISDFGL 839          
BLAST of CF835132 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.349e-20
Identity = 59/167 (35.33%), Postives = 90/167 (53.89%), Query Frame = 3
Query:  174 ESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKLESLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATTISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGL 671
            E+  F    +E AT  FSE+N LG   F   YKG L  G  VA+K +++ S +  E EF   + ++  L+  +LA L G C      E  L+Y+FVPN + L +   +    +VL+W     +I+GIA+GI YLH   R  ++H +L A  +L+    +P +SD G+
Sbjct:  331 ETLQFQFSAIEAATNKFSESNKLGHGGFGEVYKGQLITGETVAIKRLSQGSTQGAE-EFKNEVDVVAKLQHRNLAKLLGYCLD--GEEKILVYEFVPNKS-LDYFLFDNEKRRVLDWQRRYKIIEGIARGILYLHRDSRLTIIHRDLKASNILLDADMHPKISDFGM 493          
BLAST of CF835132 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 6.987e-20
Identity = 57/166 (34.34%), Postives = 93/166 (56.02%), Query Frame = 3
Query:  177 SFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKLESLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATTISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGL 671
            S  F+ + +E AT  FS++N++G+  F   Y+G L  G  VAVK ++KTS +  E EF     +++ L+ ++L  L G C      E  L+Y+FVPN + L +   +   +  L+W    ++I GIA+GI YLH   R  ++H +L A  +L+    NP ++D G+
Sbjct:  330 SLQFSFKTIEAATDKFSDSNMIGRGGFGEVYRGKLSSGPEVAVKRLSKTSGQGAE-EFKNEAVLVSKLQHKNLVRLLGFCLE--GEEKILVYEFVPNKS-LDYFLFDPAKQGELDWTRRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGM 491          
BLAST of CF835132 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.125e-20
Identity = 60/166 (36.14%), Postives = 91/166 (54.82%), Query Frame = 3
Query:  177 SFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKLESLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATTISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGL 671
            S  F+ + +E AT  FS  N LG+  F   YKG L +G  VAVK ++KTS +  E EF   + ++  L+  +L  L G C    R E  L+Y+FV N + L +   ++  +  L+W T   +I GIA+GI YLH   R  ++H +L A  +L+    NP ++D G+
Sbjct:  325 SLQFDFKVIEAATDKFSMCNKLGQGGFGQVYKGTLPNGVQVAVKRLSKTSGQG-EKEFKNEVVVVAKLQHRNLVKLLGFCLE--REEKILVYEFVSNKS-LDYFLFDSRMQSQLDWTTRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGM 486          
BLAST of CF835132 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.125e-20
Identity = 59/166 (35.54%), Postives = 90/166 (54.22%), Query Frame = 3
Query:  177 SFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKLESLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATTISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGL 671
            S  F+ + +E AT  F E N LG+  F   YKGI   G  VAVK ++KTS +  E EF   + ++  L+  +L  L G C    R E  L+Y+FVPN + L +   ++  + +L+W     +I GIA+GI YLH   R  ++H +L A  +L+    N  ++D G+
Sbjct:  336 SLQFDFKAIEAATNKFCETNKLGQGGFGEVYKGIFPSGVQVAVKRLSKTSGQG-EREFANEVIVVAKLQHRNLVRLLGFCLE--RDERILVYEFVPNKS-LDYFIFDSTMQSLLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLGDDMNAKIADFGM 497          
BLAST of CF835132 vs. ExPASy Swiss-Prot
Match: SRF5_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana GN=SRF5 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.192e-19
Identity = 67/224 (29.91%), Postives = 107/224 (47.77%), Query Frame = 3
Query:    6 GKIGPFYDNSDSRLSTDHLKEVCRRNSSPLISLEYSNGWDPLAKRQSGNVFSQEVLESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKI-LTSLKLESLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATTISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGL 671
            GK G   D +  R+ +  LK             E++N  +  AKR +    + E      F L +++ AT  FS  NLLG+ S    Y+    DG  +AVK I  T   S + E +  + + L+ ++ +++A L G C  +G     L+Y++  NG+L + L L     K L W T + +  G A+ + YLH    P ++H N+ +  +L+    NP LSD GL
Sbjct:  340 GKSGDSGDENIHRIGSKGLKHYVSSRVMSFTDTEFANKLN--AKRTTSTRSAVE------FELSDLQSATANFSPGNLLGEGSIGRVYRAKYSDGRTLAVKKIDSTLFDSGKSEGITPIVMSLSKIRHQNIAELVGYCSEQGHN--MLVYEYFRNGSLHEFLHLSDCFSKPLTWNTRVRIALGTARAVEYLHEACSPSVMHKNIKSSNILLDADLNPRLSDYGL 553          
BLAST of CF835132 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.192e-19
Identity = 62/169 (36.69%), Postives = 94/169 (55.62%), Query Frame = 3
Query:  174 ESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEG--EFLKGLKILTSLKLESLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATTISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGL 671
            +S +++ + +E AT  FS +N LG+  F A YKG L +G+ VAVK ++K   KS +G  EF     ++T L+  +L  L G C    R E  LIY+FV N + L +   +   +  L+W     +I GIA+GI YLH   R  ++H +L A  +L+    NP ++D GL
Sbjct:  334 DSLVYDFKTIEAATNKFSTSNKLGEGGFGAVYKGKLSNGTDVAVKRLSK---KSGQGTREFRNEAVLVTKLQHRNLVRLLGFCLE--REEQILIYEFVHNKS-LDYFLFDPEKQSQLDWTRRYKIIGGIARGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGL 496          
BLAST of CF835132 vs. ExPASy Swiss-Prot
Match: Y1839_ARATH (Probable serine/threonine-protein kinase At1g18390 OS=Arabidopsis thaliana GN=At1g18390 PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.556e-19
Identity = 62/198 (31.31%), Postives = 101/198 (51.01%), Query Frame = 3
Query:   78 RNSSPLISLEYSNGWDPLAKRQSGNVFSQEVLESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKLESLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATTISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGL 671
            RNSS L+    S+  DP AK        + ++   +F+ EE+E AT  F  +  LG   F   Y G L+DG  VAVK +   + K  E +F   ++ILT L+  +L +L G C SK   +  L+Y++V NG L  HL     +   L W+  + +    A  + YLH  +  ++H ++ +  +L+ + +N  ++D GL
Sbjct:  298 RNSSALLPRNISS--DPSAKSFDIEKAEELLVGVHIFSYEELEEATNNFDPSKELGDGGFGTVYYGKLKDGRSVAVKRLYDNNFKRAE-QFRNEVEILTGLRHPNLVALFG-CSSKQSRDLLLVYEYVANGTLADHLHGPQANPSSLPWSIRLKIAVETASALKYLHASK--IIHRDVKSNNILLDQNFNVKVADFGL 489          
BLAST of CF835132 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.033e-19
Identity = 61/186 (32.80%), Postives = 104/186 (55.91%), Query Frame = 3
Query:  129 LAKRQSGNVFSQEVL----ESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKLESLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATTISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGL 671
            + KR+      +E+L    + + F   E++ ATQ F  +N LG+  F   YKG L DG  VAVK ++  S +  +G+F+  +  +++++  +L  L G CC +G     L+Y+++PNG+L Q L  E      L+W+T   +  G+A+G+ YLH + R  +VH ++ A  +L+  +  P +SD GL
Sbjct:  658 IRKRRKRYTDDEEILSMDVKPYTFTYSELKSATQDFDPSNKLGEGGFGPVYKGKLNDGREVAVKLLSVGS-RQGKGQFVAEIVAISAVQHRNLVKLYG-CCYEGEHR-LLVYEYLPNGSLDQALFGEKTLH--LDWSTRYEICLGVARGLVYLHEEARLRIVHRDVKASNILLDSKLVPKVSDFGL 838          
The following BLAST results are available for this feature:
BLAST of CF835132 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
CRK37_ARATH4.096e-2033.33Cysteine-rich receptor-like protein kinase 37 OS=A... [more]
Y1561_ARATH5.349e-2033.69Probable LRR receptor-like serine/threonine-protei... [more]
CRK25_ARATH5.349e-2035.33Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
CRK35_ARATH6.987e-2034.34Putative cysteine-rich receptor-like protein kinas... [more]
CRK5_ARATH9.125e-2036.14Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]
CRK4_ARATH9.125e-2035.54Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]
SRF5_ARATH1.192e-1929.91Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsi... [more]
CRK11_ARATH1.192e-1936.69Cysteine-rich receptor-like protein kinase 11 OS=A... [more]
Y1839_ARATH1.556e-1931.31Probable serine/threonine-protein kinase At1g18390... [more]
Y5614_ARATH2.033e-1932.80Probable LRR receptor-like serine/threonine-protei... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_06L15_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06L15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835132 ID=CF835132; Name=CF835132; organism=Citrus sinensis; type=EST; length=673bp
ACTCAGGGAAAATTGGACCCTTTTATGATAATTCAGATAGTCGTCTTAGT
ACCGACCACCTTAAGGAGGTTTGCAGGAGAAATTCTTCCCCACTTATCAG
CCTTGAGTATTCCAATGGATGGGATCCGTTGGCCAAAAGACAGAGTGGAA
ATGTTTTTTCTCAGGAAGTTCTTGAGAGTTTCATGTTTAATTTGGAAGAG
GTGGAGCGAGCAACTCAGTGTTTCTCAGAGGCGAATTTGCTGGGAAAGAG
CAGTTTTTCTGCCACCTACAAAGGGATCCTGAGAGATGGATCAGTTGTTG
CTGTAAAGTGCATTGCCAAGACAAGTTGCAAGTCTGACGAAGGTGAGTTT
TTGAAGGGGCTAAAGATATTGACCTCATTAAAACTTGAAAGTCTTGCAAG
CTTGAGAGGTATCTGCTGTTCAAAAGGCAGAGGTGAGTGTTTTCTCATCT
ATGATTTTGTCCCCAATGGAAACCTCTTACAGCATCTTGATTTAGAGGCA
GGCAGTGAAAAGGTTCTTGAATGGGCTACCACAATTTCTGTCATAAAGGG
AATTGCCAAAGGGATCAGTTATTTACATGGAAAGAGACCTGGTCTAGTTC
ACCCGAATTTGTCTGCTGAGAAGGTGCTCATTCATAGACGATATAATCCC
TTGCTTTCAGATTCTGGGCTGCA
back to top