CF835132

Overview
NameCF835132
Unique NameCF835132
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length673
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835132 vs. ExPASy Swiss-Prot
Match: Y5707_ARATH (Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.928e-11
Identity = 48/172 (27.91%), Postives = 88/172 (51.16%), Query Frame = 3
Query:  183 MFNLEEVERATQCFSEANLLGKSSFSATYKG-ILRDGS------VVAVKCIAKTSCKSDEGEFLKGLKILTSLKLESLASLRGICCSKGRG--ECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATTISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGL 671
            +F+ EE+ +AT  FS   ++G+  F   YKG IL +G       VVA+K + +   +  + ++L  ++ L  +   ++  L G C   G    E  L+Y+++ N +L  HL         L W   + ++ G A+G++YLH  +  +++ +  +  VL+  ++ P LSD GL
Sbjct:   73 VFSYEELSKATYVFSRKLVIGEGGFGIVYKGKILSNGDSSDPPLVVAIKKLNRQGLQGHK-QWLAEVQFLGVVNHPNVVKLIGYCSEDGETGIERLLVYEYMSNRSLEDHLFPRRSH--TLPWKKRLEIMLGAAEGLTYLHDLK--VIYRDFKSSNVLLDDQFCPKLSDFGL 239          
BLAST of CF835132 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.928e-11
Identity = 46/166 (27.71%), Postives = 79/166 (47.59%), Query Frame = 3
Query:  153 VFSQEVLESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKLESLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSE-----KVLEWATTISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLI 632
            V   + +E  +    E++ AT  F   +L+G+ S+   Y G+L +    A+K +   S K  + EFL  + +++ LK ++   L G C         L Y+F  NG+L   L    G +      VL W   + +  G A+G+ YLH K  P ++H ++ +  VL+
Sbjct:   50 VVKLQPIEVPIIPFSELKEATDDFGSNSLIGEGSYGRVYYGVLNNDLPSAIKKL--DSNKQPDNEFLAQVSMVSRLKHDNFVQLLGYCVD--GNSRILSYEFANNGSLHDILHGRKGVKGAQPGPVLSWYQRVKIAVGAARGLEYLHEKANPHIIHRDIKSSNVLL 211          
BLAST of CF835132 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.928e-11
Identity = 49/174 (28.16%), Postives = 85/174 (48.85%), Query Frame = 3
Query:  159 SQEVLESFM--FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKLESLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATTISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGL 671
            SQ+ +E+    +   EV   T+ F    +LGK  F   Y G +     VAVK ++ +S +  + EF   +++L  +   +L SL G C  K      LIY ++ NG+L +H         ++ W   +++    A G+ YLH G +P +VH ++ +  +L+  +    L+D GL
Sbjct:  549 SQQSIETIKKRYTYAEVLAMTKKFER--VLGKGGFGMVYHGYINGTEEVAVKLLSPSSAQGYK-EFKTEVELLLRVYHTNLVSLVGYCDEK--DHLALIYQYMVNGDLKKHF----SGSSIISWVDRLNIAVDAASGLEYLHIGCKPLIVHRDVKSSNILLDDQLQAKLADFGL 713          
BLAST of CF835132 vs. ExPASy Swiss-Prot
Match: WAK2_ARATH (Wall-associated receptor kinase 2 OS=Arabidopsis thaliana GN=WAK2 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.928e-11
Identity = 51/201 (25.37%), Postives = 97/201 (48.26%), Query Frame = 3
Query:   75 RRNSSPLISLEYSNGWDPLAKRQSGNVFSQEVLESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKLESLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGS--EKVLEWATTISVIKGIAKGISYLHGKRP-GLVHPNLSAEKVLIHRRYNPLLSDSG 668
            R+N+         NG   L +R SG   S   ++  +F  + ++ AT  + E+ +LG+      YKGIL D S+VA+K  A+   +S   +F+  + +L+ +   ++  + G CC +      L+Y+F+ +G L  HL    GS  +  L W   + +   +A  ++YLH      ++H ++    +L+ +     ++D G
Sbjct:  357 RKNTELRQKFFEQNGGGMLIQRVSGAGPSN--VDVKIFTEKGMKEATNGYHESRILGQGGQGTVYKGILPDNSIVAIK-KARLGNRSQVEQFINEVLVLSQINHRNVVKVLG-CCLETEVP-LLVYEFINSGTLFDHLH---GSLYDSSLTWEHRLRIATEVAGSLAYLHSSASIPIIHRDIKTANILLDKNLTAKVADFG 549          
BLAST of CF835132 vs. ExPASy Swiss-Prot
Match: PAM74_ARATH (Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.928e-11
Identity = 47/163 (28.83%), Postives = 78/163 (47.85%), Query Frame = 3
Query:  186 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKLESLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATTISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGL 671
            F   EV + T  F    ++G+  F     G +     VAVK ++++S +  +  F   + +L  +   +L SL G C    R    LIY+F+P G+L QHL  ++G    + W   + +    A G+ YLH G  P +VH ++    +L+  +    L+D GL
Sbjct:  569 FTYSEVIKMTNNFQR--VVGEGGFGVVCHGTINGSEQVAVKVLSQSSSQGYK-HFKAEVDLLLRVHHTNLVSLVGYCDE--RDHLALIYEFLPKGDLRQHLSGKSGG-SFINWGNRLRIALEAALGLEYLHSGCTPPIVHRDIKTTNILLDEQLKAKLADFGL 725          
BLAST of CF835132 vs. ExPASy Swiss-Prot
Match: ACCR4_ARATH (Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana GN=CCR4 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.928e-11
Identity = 49/174 (28.16%), Postives = 86/174 (49.43%), Query Frame = 3
Query:  186 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVK-------CIAKTSCK----SDEGEFLKGLKILTSLKLESLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATTISVIKGIAKGISYLHG-KRPGLVHPNLSAEKVLIHRRYNPLLSDSGL 671
            F+++E+  AT  FS    LG  SF + Y+G+L DG  VA+K        ++ T+ +      +  F+  L+ ++ L  ++L  L G    +   E  L+Y+++ NG+L  H  L       L W T + +    A+GI YLH    P ++H ++ +  +L+   +   +SD GL
Sbjct:  431 FSIDELALATDGFSVRFHLGIGSFGSVYQGVLSDGRHVAIKRAELTNPTLSGTTMRHRRADKDSAFVNELESMSRLNHKNLVRLLGF--YEDTEERILVYEYMKNGSLADH--LHNPQFDPLSWQTRLMIALDAARGIQYLHEFIVPPVIHRDIKSSNILLDATWTAKVSDFGL 600          
BLAST of CF835132 vs. ExPASy Swiss-Prot
Match: Y1634_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g63430 OS=Arabidopsis thaliana GN=At1g63430 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.743e-11
Identity = 49/160 (30.63%), Postives = 79/160 (49.38%), Query Frame = 3
Query:  195 EEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAV--KCIAKTSCKSD-EGEFLKGLKILTSLKLESLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATTISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSD 662
            +E+E A + FS  N++G S+ S  YKG L+ GS +AV   C+ +       E  F + +  L  L  E+ A L G C         L++++  NG L +HL    G   ++ WA  + ++ GIA+G+ YLH +  P      LS+  + +   + P L D
Sbjct:  353 QELEVACEDFS--NIIGLSADSQIYKGTLKGGSEIAVISLCVKEEDWTGYLELYFQREVADLARLNHENTAKLLGYCKEISPFTRMLVFEYASNGTLYEHLHY--GEAALVSWARRMKIVIGIARGLKYLHMELDPPFTISELSSNAIYLTEDFTPKLVD 508          
BLAST of CF835132 vs. ExPASy Swiss-Prot
Match: Y1124_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g12460 OS=Arabidopsis thaliana GN=At1g12460 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.743e-11
Identity = 59/214 (27.57%), Postives = 99/214 (46.26%), Query Frame = 3
Query:   75 RRNSSPLISLEYSNGWDPLAKR--QSGNVFSQEVLESFMFNL----EEVERATQCF-SEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKLESLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLE-------AGSEKVLEWATTISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGL 671
            RR    ++++E +    PLA     SG +  + VL  F  NL    E+ E  T+    + N++G  S  + Y+     G  +AVK +       ++ EF + +  L  L+  +L+S +G   S       ++ +FVPNG+L  +L L        +     L W     +  G AK +S+LH   +P ++H N+ +  +L+  RY   LSD GL
Sbjct:  543 RRKDEEILTVETT----PLASSIDSSGVIIGKLVL--FSKNLPSKYEDWEAGTKALLDKENIIGMGSIGSVYRASFEGGVSIAVKKLETLGRIRNQEEFEQEIGRLGGLQHPNLSSFQGYYFSSTMQ--LILSEFVPNGSLYDNLHLRIFPGTSSSYGNTDLNWHRRFQIALGTAKALSFLHNDCKPAILHLNVKSTNILLDERYEAKLSDYGL 748          
The following BLAST results are available for this feature:
BLAST of CF835132 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
Y5707_ARATH5.928e-1127.91Probable receptor-like protein kinase At5g47070 OS... [more]
Y2706_ARATH5.928e-1127.71Probable receptor-like protein kinase At2g47060 OS... [more]
Y1756_ARATH5.928e-1128.16Probable LRR receptor-like serine/threonine-protei... [more]
WAK2_ARATH5.928e-1125.37Wall-associated receptor kinase 2 OS=Arabidopsis t... [more]
PAM74_ARATH5.928e-1128.83Probable LRR receptor-like serine/threonine-protei... [more]
ACCR4_ARATH5.928e-1128.16Serine/threonine-protein kinase-like protein CCR4 ... [more]
Y1634_ARATH7.743e-1130.63Probable LRR receptor-like serine/threonine-protei... [more]
Y1124_ARATH7.743e-1127.57Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06L15_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06L15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835132 ID=CF835132; Name=CF835132; organism=Citrus sinensis; type=EST; length=673bp
ACTCAGGGAAAATTGGACCCTTTTATGATAATTCAGATAGTCGTCTTAGT
ACCGACCACCTTAAGGAGGTTTGCAGGAGAAATTCTTCCCCACTTATCAG
CCTTGAGTATTCCAATGGATGGGATCCGTTGGCCAAAAGACAGAGTGGAA
ATGTTTTTTCTCAGGAAGTTCTTGAGAGTTTCATGTTTAATTTGGAAGAG
GTGGAGCGAGCAACTCAGTGTTTCTCAGAGGCGAATTTGCTGGGAAAGAG
CAGTTTTTCTGCCACCTACAAAGGGATCCTGAGAGATGGATCAGTTGTTG
CTGTAAAGTGCATTGCCAAGACAAGTTGCAAGTCTGACGAAGGTGAGTTT
TTGAAGGGGCTAAAGATATTGACCTCATTAAAACTTGAAAGTCTTGCAAG
CTTGAGAGGTATCTGCTGTTCAAAAGGCAGAGGTGAGTGTTTTCTCATCT
ATGATTTTGTCCCCAATGGAAACCTCTTACAGCATCTTGATTTAGAGGCA
GGCAGTGAAAAGGTTCTTGAATGGGCTACCACAATTTCTGTCATAAAGGG
AATTGCCAAAGGGATCAGTTATTTACATGGAAAGAGACCTGGTCTAGTTC
ACCCGAATTTGTCTGCTGAGAAGGTGCTCATTCATAGACGATATAATCCC
TTGCTTTCAGATTCTGGGCTGCA
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