CF835132

Overview
NameCF835132
Unique NameCF835132
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length673
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835132 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 6.539e-18
Identity = 51/163 (31.29%), Postives = 88/163 (53.99%), Query Frame = 3
Query:  186 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKLESLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATTISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGL 671
            F+L E++ A+  FS  N+LG+  F   YKG L DG++VAVK + +      E +F   +++++     +L  LRG C +    E  L+Y ++ NG++   L     S+  L+W T   +  G A+G+SYLH    P ++H ++ A  +L+   +  ++ D GL
Sbjct:  290 FSLRELQVASDGFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTP--TERLLVYPYMANGSVASCLRERPPSQPPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 450          
BLAST of CF835132 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 8.541e-18
Identity = 60/187 (32.09%), Postives = 105/187 (56.15%), Query Frame = 3
Query:  135 KRQSGNVFSQEV----LESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEG--EFLKGLKILTSLKLESLASLRGICCSKGRGECFLIYDFVPNGNLLQHL-DLEAGSEKVLEWATTISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGL 671
            KR+  N   +E+    L++  F L +++ AT  F     +G+  F + YKG L +G ++AVK   + S KS +G  EF+  + ++++L+  +L  L G CC +G  +  L+Y+++ N  L + L   +  S   L+W+T   +  GIAKG+++LH + R  +VH ++ A  VL+ +  N  +SD GL
Sbjct:  645 KRRDKNDIDKELRGLDLQTGTFTLRQIKAATDNFDVTRKIGEGGFGSVYKGELSEGKLIAVK---QLSAKSRQGNREFVNEIGMISALQHPNLVKLYG-CCVEG-NQLILVYEYLENNCLSRALFGKDESSRLKLDWSTRKKIFLGIAKGLTFLHEESRIKIVHRDIKASNVLLDKDLNAKISDFGL 826          
BLAST of CF835132 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 8.541e-18
Identity = 51/163 (31.29%), Postives = 87/163 (53.37%), Query Frame = 3
Query:  186 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKLESLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATTISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGL 671
            F+L E++ AT  FS  N+LG+  F   YKG L DG++VAVK + +      E +F   +++++     +L  LRG C +    E  L+Y ++ NG++   L     S+  L W+    +  G A+G+SYLH    P ++H ++ A  +L+   +  ++ D GL
Sbjct:  293 FSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTP--TERLLVYPYMANGSVASCLRERPPSQLPLAWSIRQQIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 453          
BLAST of CF835132 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.115e-17
Identity = 52/163 (31.90%), Postives = 88/163 (53.99%), Query Frame = 3
Query:  186 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKLESLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATTISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGL 671
            F+  E++ AT  FS  N+LG+  F   YKG L +G+VVAVK + K    + E +F   ++++      +L  L G C +    E  L+Y ++PNG++   L    G +  L+W   IS+  G A+G+ YLH +  P ++H ++ A  +L+   +  ++ D GL
Sbjct:  288 FSFREIQTATSNFSPKNILGQGGFGMVYKGYLPNGTVVAVKRL-KDPIYTGEVQFQTEVEMIGLAVHRNLLRLFGFCMTP--EERMLVYPYMPNGSVADRLRDNYGEKPSLDWNRRISIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESFEAIVGDFGL 447          
BLAST of CF835132 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.115e-17
Identity = 55/186 (29.57%), Postives = 97/186 (52.15%), Query Frame = 3
Query:  135 KRQSGNVFSQEVL-------ESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKLESLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATTISVIKGIAKGISYLHGKRPG-LVHPNLSAEKVLIHRRYNPLLSDSG 668
            KR  G +  Q+++       ++ +F+  E+E+AT+ FS   +LG+      YKG+L DG +VAVK  +K   +    EF+  + IL+ +   ++  L G CC + +    L+Y+F+PNGNL +HL  E     +  W   + +   IA  +SYLH      + H ++ +  +++  +Y   +SD G
Sbjct:  411 KRNGGLLLQQQLISTVGMVEKTIVFSSRELEKATENFSSNRILGQGGQGTVYKGMLVDGRIVAVK-KSKVVDEDKLEEFINEVVILSQINHRNIVKLLG-CCLETKVP-VLVYEFIPNGNLFEHLHDEFDENIMATWNIRLRIAIDIAGALSYLHSSASSPIYHRDVKSTNIMLDEKYRAKVSDFG 593          
BLAST of CF835132 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.457e-17
Identity = 54/163 (33.13%), Postives = 90/163 (55.21%), Query Frame = 3
Query:  186 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKLESLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATTISVIKGIAKGISYLHGKR-PGLVHPNLSAEKVLIHRRYNPLLSDSGL 671
            +N  E++ AT  FS+ + +G+  +   YKG L  G VVAVK   + S +  + EF   +++L+ L   +L SL G C  K  GE  L+Y+++PNG+L     L A   + L  A  + +  G A+GI YLH +  P ++H ++    +L+  + NP ++D G+
Sbjct:  619 YNFTELDSATSSFSDLSQIGRGGYGKVYKGHLPGGLVVAVKRAEQGSLQGQK-EFFTEIELLSRLHHRNLVSLLGYCDQK--GEQMLVYEYMPNGSLQD--ALSARFRQPLSLALRLRIALGSARGILYLHTEADPPIIHRDIKPSNILLDSKMNPKVADFGI 776          
BLAST of CF835132 vs. ExPASy Swiss-Prot
Match: CRK7_ARATH (Cysteine-rich receptor-like protein kinase 7 OS=Arabidopsis thaliana GN=CRK7 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.903e-17
Identity = 56/168 (33.33%), Postives = 91/168 (54.17%), Query Frame = 3
Query:  171 LESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKLESLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATTISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGL 671
            +ES   +   ++ AT  FSE N +G+  F   YKG   +G+ VAVK ++KTS + D  EF   + ++ +L+ ++L  + G   S  R E  L+Y++V N +L   L  +   +  L W     +I GIA+GI YLH   R  ++H +L A  +L+    NP ++D G+
Sbjct:  319 IESLQLDYRAIQAATNDFSENNKIGRGGFGDVYKGTFSNGTEVAVKRLSKTSEQGDT-EFKNEVVVVANLRHKNLVRILGF--SIEREERILVYEYVENKSLDNFL-FDPAKKGQLYWTQRYHIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGM 482          
BLAST of CF835132 vs. ExPASy Swiss-Prot
Match: ACCR2_ARATH (Serine/threonine-protein kinase-like protein CCR2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.903e-17
Identity = 55/168 (32.74%), Postives = 89/168 (52.98%), Query Frame = 3
Query:  174 ESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVK-CIAKTSCKSDEGEFLKGLKILTSLKLESLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATTISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGL 671
            E+ +F L E++ AT  F E N LG+ SF   YK +L DG  VAVK   A T   S+   F   L+IL  ++  ++ +L G C     GE  L+Y+++P+G L  HL    G    L+W+  + ++   A+G+ YLH +  P ++H ++    +L+       ++D GL
Sbjct:  503 ETKIFRLSELKDATHGFKEFNELGRGSFGFVYKAVLSDGIHVAVKRANAATIIHSNNRGFESELEILCKIRHNNIVNLLGYCSE--MGERLLVYEYMPHGTLHDHLH---GDLSQLDWSMRLKIMLQAARGLDYLHNEVDPPIIHRDVKTSNILLDGEMCARIADFGL 665          
BLAST of CF835132 vs. ExPASy Swiss-Prot
Match: Y5838_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana GN=At5g48380 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.485e-17
Identity = 58/192 (30.21%), Postives = 102/192 (53.12%), Query Frame = 3
Query:  123 DPLAKRQSGNVFSQEVLESFMFN-------LEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKLESLASLRGICCSKGRGECFLIYDFVPNGNLLQHL-DLEAGSEKVLEWATTISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGL 671
            DP   R + ++  Q+ ++ FMF        L ++ +AT+ F + N++        YKG L DGS++ +K +  +  +  E EF   +K L S+K  +L  L G C +    E  L+Y+++ NG L   L   +  S K L+W + + +  G AKG+++LH    P ++H N+S++ +L+   + P +SD GL
Sbjct:  263 DPEGNRWAKSLKGQKGVKVFMFKKSVSKMKLSDLMKATEEFKKDNIIATGRTGTMYKGRLEDGSLLMIKRLQDS--QRSEKEFDAEMKTLGSVKNRNLVPLLGYCVA--NKERLLMYEYMANGYLYDQLHPADEESFKPLDWPSRLKIAIGTAKGLAWLHHSCNPRIIHRNISSKCILLTAEFEPKISDFGL 450          
BLAST of CF835132 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.485e-17
Identity = 50/164 (30.49%), Postives = 82/164 (50.00%), Query Frame = 3
Query:  186 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCK-SDEGEFLKGLKILTSLKLESLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATTISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGL 671
            + +  ++ AT  FS+ N++G+ S    Y+    +G ++A+K I   +    +E  FL+ +  ++ L+  ++  L G C     G+  L+Y++V NGNL   L         L W   + V  G AK + YLH    P +VH N  +  +L+    NP LSDSGL
Sbjct:  383 YTVSSLQVATNSFSQENIIGEGSLGRVYRAEFPNGKIMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVPLAGYCTE--HGQRLLVYEYVGNGNLDDTLHTNDDRSMNLTWNARVKVALGTAKALEYLHEVCLPSIVHRNFKSANILLDEELNPHLSDSGL 544          
The following BLAST results are available for this feature:
BLAST of CF835132 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
SERK1_ARATH6.539e-1831.29Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
Y1765_ARATH8.541e-1832.09Probable LRR receptor-like serine/threonine-protei... [more]
SERK2_ARATH8.541e-1831.29Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
Y5457_ARATH1.115e-1731.90Probable LRR receptor-like serine/threonine-protei... [more]
WAKLH_ARATH1.115e-1729.57Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
Y5374_ARATH1.457e-1733.13Probable LRR receptor-like serine/threonine-protei... [more]
CRK7_ARATH1.903e-1733.33Cysteine-rich receptor-like protein kinase 7 OS=Ar... [more]
ACCR2_ARATH1.903e-1732.74Serine/threonine-protein kinase-like protein CCR2 ... [more]
Y5838_ARATH2.485e-1730.21Probably inactive leucine-rich repeat receptor-lik... [more]
SRF8_ARATH2.485e-1730.49Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_06L15_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06L15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835132 ID=CF835132; Name=CF835132; organism=Citrus sinensis; type=EST; length=673bp
ACTCAGGGAAAATTGGACCCTTTTATGATAATTCAGATAGTCGTCTTAGT
ACCGACCACCTTAAGGAGGTTTGCAGGAGAAATTCTTCCCCACTTATCAG
CCTTGAGTATTCCAATGGATGGGATCCGTTGGCCAAAAGACAGAGTGGAA
ATGTTTTTTCTCAGGAAGTTCTTGAGAGTTTCATGTTTAATTTGGAAGAG
GTGGAGCGAGCAACTCAGTGTTTCTCAGAGGCGAATTTGCTGGGAAAGAG
CAGTTTTTCTGCCACCTACAAAGGGATCCTGAGAGATGGATCAGTTGTTG
CTGTAAAGTGCATTGCCAAGACAAGTTGCAAGTCTGACGAAGGTGAGTTT
TTGAAGGGGCTAAAGATATTGACCTCATTAAAACTTGAAAGTCTTGCAAG
CTTGAGAGGTATCTGCTGTTCAAAAGGCAGAGGTGAGTGTTTTCTCATCT
ATGATTTTGTCCCCAATGGAAACCTCTTACAGCATCTTGATTTAGAGGCA
GGCAGTGAAAAGGTTCTTGAATGGGCTACCACAATTTCTGTCATAAAGGG
AATTGCCAAAGGGATCAGTTATTTACATGGAAAGAGACCTGGTCTAGTTC
ACCCGAATTTGTCTGCTGAGAAGGTGCTCATTCATAGACGATATAATCCC
TTGCTTTCAGATTCTGGGCTGCA
back to top