CF835132

Overview
NameCF835132
Unique NameCF835132
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length673
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835132 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.686e-16
Identity = 52/163 (31.90%), Postives = 87/163 (53.37%), Query Frame = 3
Query:  186 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKLESLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATTISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGL 671
            F   EVE  T  F    +LG+  F   Y GIL     +AVK ++++S +  + EF   +++L  +   +L SL G C  +      L+Y++ PNG+L QHL  E G    L+W++ + ++   A+G+ YLH G +P +VH ++    +L+   +   L+D GL
Sbjct:  563 FTYSEVEALTDNFER--VLGEGGFGVVYHGILNGTQPIAVKLLSQSSVQGYK-EFKAEVELLLRVHHVNLVSLVGYCDEESN--LALLYEYAPNGDLKQHLSGERGGSP-LKWSSRLKIVVETAQGLEYLHTGCKPPMVHRDVKTTNILLDEHFQAKLADFGL 719          
BLAST of CF835132 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.121e-16
Identity = 50/163 (30.67%), Postives = 82/163 (50.31%), Query Frame = 3
Query:  186 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKLESLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATTISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGL 671
            F   E++ AT  FSE N+LG+  F   YKG+L D + VAVK +        +  F + +++++     +L  L G C +  + E  L+Y F+ N +L   L      + VL+W T   +  G A+G  YLH    P ++H ++ A  VL+   +  ++ D GL
Sbjct:  278 FAWRELQLATDNFSEKNVLGQGGFGKVYKGVLPDNTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTT--QTERLLVYPFMQNLSLAHRLREIKAGDPVLDWETRKRIALGAARGFEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 438          
BLAST of CF835132 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.121e-16
Identity = 54/165 (32.73%), Postives = 85/165 (51.52%), Query Frame = 3
Query:  186 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEG--EFLKGLKILTSLKLESLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATTISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGL 671
            F  +E+  AT  F E++LLG   F   YKG L DG+ VAVK   + + +S++G  EF   +++L+ L+   L SL G C    R E  L+Y+++ NG L  H  L       L W   + +  G A+G+ YLH G    ++H ++    +L+       ++D GL
Sbjct:  498 FMFQEIMDATNKFDESSLLGVGGFGRVYKGTLEDGTKVAVK---RGNPRSEQGMAEFRTEIEMLSKLRHRHLVSLIGYC--DERSEMILVYEYMANGPLRSH--LYGADLPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDENLVAKVADFGL 655          
BLAST of CF835132 vs. ExPASy Swiss-Prot
Match: CRK16_ARATH (Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 6.121e-16
Identity = 52/166 (31.33%), Postives = 90/166 (54.22%), Query Frame = 3
Query:  177 SFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKLESLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATTISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGL 671
            S  F+ + +E AT  F ++N LG   F   +KG   +G+ VAVK ++K S + +E EF   + ++  L+  +L  L G   S    E  L+Y+++PN + L +   +      L+W T  ++I+G+ +GI YLH   R  ++H +L A  +L+    NP ++D G+
Sbjct:  320 SLQFDFKAIEAATNNFQKSNKLGHGGFGEVFKGTFPNGTEVAVKRLSKISGQGEE-EFKNEVLLVAKLQHRNLVRLLGF--SVEGEEKILVYEYMPNKS-LDYFLFDHRRRGQLDWRTRYNIIRGVTRGILYLHQDSRLTIIHRDLKAGNILLDVDMNPKIADFGV 481          
BLAST of CF835132 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.994e-16
Identity = 51/186 (27.42%), Postives = 98/186 (52.69%), Query Frame = 3
Query:  123 DPLAKRQSGN--VFSQEVLESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKLESLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATTISVIKGIAKGISYLHG-KRPGLVHPNLSAEKVLIHRRYNPLLSDSGL 671
            +P AK  +G   + + +++ +  F  EE+ + T  FS+AN +G   +   YKG L +G V+A+K  A+        EF   +++L+ +  +++  L G C    + E  L+Y+++PNG+L   L  + G +  L+W   + +  G  KG++YLH    P ++H ++ +  +L+       ++D GL
Sbjct:  599 NPFAKWDAGKNEMDAPQLMGTKAFTFEELSKCTNNFSDANDVGGGGYGQVYKGTLPNGQVIAIK-RAQQGSMQGAFEFKTEIELLSRVHHKNVVKLLGFCFD--QKEQMLVYEYIPNGSLRDGLSGKNGVK--LDWTRRLKIALGSGKGLAYLHELADPPIIHRDVKSNNILLDEHLTAKVADFGL 779          
BLAST of CF835132 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 7.994e-16
Identity = 49/163 (30.06%), Postives = 83/163 (50.92%), Query Frame = 3
Query:  186 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKLESLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATTISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGL 671
            F L E+  AT  FS  N+LG+  F   YKG L DG++VAVK + +   K  E +F   +++++     +L  LRG C +    E  L+Y ++ NG++   L         L+W     +  G A+G++YLH      ++H ++ A  +L+   +  ++ D GL
Sbjct:  282 FTLRELLVATDNFSNKNVLGRGGFGKVYKGRLADGNLVAVKRLKEERTKGGELQFQTEVEMISMAVHRNLLRLRGFCMTP--TERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHRDVKAANILLDEEFEAVVGDFGL 442          
BLAST of CF835132 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.994e-16
Identity = 53/168 (31.55%), Postives = 89/168 (52.98%), Query Frame = 3
Query:  174 ESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKLESLASLRGICCSKGRGECF-LIYDFVPNGNLLQHLDLEAGSEKVLEWATTISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGL 671
            +S  F   EV + T+ F    +LGK  F   Y G ++    VAVK ++++S +  + EF   + +L  +   +L SL G CC    G+   L+Y+F+PNG+L QHL  + G+  ++ W+  + +    A G+ YLH G  P +VH ++    +L+   +   L+D GL
Sbjct:  550 KSKRFTYSEVVQVTKNFQR--VLGKGGFGMVYHGTVKGSEQVAVKVLSQSSTQGSK-EFKAEVDLLLRVHHTNLVSLVGYCCE---GDYLALVYEFLPNGDLKQHLSGKGGN-SIINWSIRLRIALEAALGLEYLHIGCTPPMVHRDVKTANILLDENFKAKLADFGL 710          
BLAST of CF835132 vs. ExPASy Swiss-Prot
Match: LRKA1_ARATH (Lectin-domain containing receptor kinase A4.1 OS=Arabidopsis thaliana GN=LECRKA4.1 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.994e-16
Identity = 54/156 (34.62%), Postives = 83/156 (53.21%), Query Frame = 3
Query:  210 ATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKLESLASLRGICCSKGRGECFLIYDFVPNGNLLQHL-DLEAGSEKVLEWATTISVIKGIAKGISYLHGKRPGLV-HPNLSAEKVLIHRRYNPLLSDSGL 671
            AT  F +  ++G   F   +KG L +   +AVK I  +S +    EF+  ++ L  L+ ++L +L+G C  K + +  LIYD++PNG+L   L  +   S  VL W     + KGIA G+ YLH +   +V H ++    VLI  + NP L D GL
Sbjct:  363 ATDGFKKTGIIGTGGFGTVFKGKLPNSDPIAVKKIIPSS-RQGVREFVAEIESLGKLRHKNLVNLQGWC--KHKNDLLLIYDYIPNGSLDSLLYTVPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEKIVIHRDVKPSNVLIDSKMNPRLGDFGL 515          
BLAST of CF835132 vs. ExPASy Swiss-Prot
Match: CRK30_ARATH (Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana GN=CRK30 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.994e-16
Identity = 52/165 (31.52%), Postives = 90/165 (54.55%), Query Frame = 3
Query:  186 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKLESLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEK--VLEWATTISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGL 671
            F+++++E AT  F  +N +G+  F   YKG L +G+ VAVK +++T   SD+GE     ++L   KL+    +R +  +    E  L+++FVPN +L   L       K   L+W    ++I GI +G+ YLH   R  ++H ++ A  +L+    NP ++D G+
Sbjct:  334 FDIKDIEAATSNFLASNKIGQGGFGEVYKGTLSNGTEVAVKRLSRT---SDQGELEFKNEVLLVAKLQHRNLVRLLGFALQGEEKILVFEFVPNKSLDYFLFGSTNPTKKGQLDWTRRYNIIGGITRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGM 495          
BLAST of CF835132 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.994e-16
Identity = 55/166 (33.13%), Postives = 85/166 (51.20%), Query Frame = 3
Query:  177 SFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKLESLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATTISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGL 671
            S  F+ + +  AT  F   N LG+  F   YKG    G  VAVK ++KTS +  E EF   + ++  L+  +L  L G C      E  L+Y+FV N + L +   +   ++ L+W     +I GIA+GI YLH   R  ++H +L A  +L+    NP ++D G+
Sbjct:  493 SLQFDFKAIVAATNNFLPINKLGQGGFGEVYKGTFPSGVQVAVKRLSKTSGQG-EREFENEVVVVAKLQHRNLVRLLGYCLE--GEEKILVYEFVHNKS-LDYFLFDTTMKRQLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGM 654          
The following BLAST results are available for this feature:
BLAST of CF835132 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
Y2289_ARATH4.686e-1631.90Probable LRR receptor-like serine/threonine-protei... [more]
Y5129_ARATH6.121e-1630.67Probable LRR receptor-like serine/threonine-protei... [more]
THE1_ARATH6.121e-1632.73Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
CRK16_ARATH6.121e-1631.33Putative cysteine-rich receptor-like protein kinas... [more]
Y5977_ARATH7.994e-1627.42Probable leucine-rich repeat receptor-like protein... [more]
SERK4_ARATH7.994e-1630.06Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
RLK7_ARATH7.994e-1631.55Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
LRKA1_ARATH7.994e-1634.62Lectin-domain containing receptor kinase A4.1 OS=A... [more]
CRK30_ARATH7.994e-1631.52Putative cysteine-rich receptor-like protein kinas... [more]
CRK23_ARATH7.994e-1633.13Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06L15_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06L15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835132 ID=CF835132; Name=CF835132; organism=Citrus sinensis; type=EST; length=673bp
ACTCAGGGAAAATTGGACCCTTTTATGATAATTCAGATAGTCGTCTTAGT
ACCGACCACCTTAAGGAGGTTTGCAGGAGAAATTCTTCCCCACTTATCAG
CCTTGAGTATTCCAATGGATGGGATCCGTTGGCCAAAAGACAGAGTGGAA
ATGTTTTTTCTCAGGAAGTTCTTGAGAGTTTCATGTTTAATTTGGAAGAG
GTGGAGCGAGCAACTCAGTGTTTCTCAGAGGCGAATTTGCTGGGAAAGAG
CAGTTTTTCTGCCACCTACAAAGGGATCCTGAGAGATGGATCAGTTGTTG
CTGTAAAGTGCATTGCCAAGACAAGTTGCAAGTCTGACGAAGGTGAGTTT
TTGAAGGGGCTAAAGATATTGACCTCATTAAAACTTGAAAGTCTTGCAAG
CTTGAGAGGTATCTGCTGTTCAAAAGGCAGAGGTGAGTGTTTTCTCATCT
ATGATTTTGTCCCCAATGGAAACCTCTTACAGCATCTTGATTTAGAGGCA
GGCAGTGAAAAGGTTCTTGAATGGGCTACCACAATTTCTGTCATAAAGGG
AATTGCCAAAGGGATCAGTTATTTACATGGAAAGAGACCTGGTCTAGTTC
ACCCGAATTTGTCTGCTGAGAAGGTGCTCATTCATAGACGATATAATCCC
TTGCTTTCAGATTCTGGGCTGCA
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