CF835136

Overview
NameCF835136
Unique NameCF835136
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length596
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11430 contig Csv1_Contig11430:1415..2009. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835136 vs. ExPASy Swiss-Prot
Match: C75A5_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A5 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.759e-27
Identity = 58/116 (50.00%), Postives = 83/116 (71.55%), Query Frame = -3
Query:  199 EIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFL---GSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNH--NMDMEDKFGLTVQKAQPLHAV 531
            E+ G  +PKG ++ VN+WAIGRD S W+NP+ F P+RFL    +  D +G +FELIPFGAGRRIC G  L I ++  +LG+L++SFDW+L +    ++M++ FGL +QKA PL A+
Sbjct:  383 EVNGHYIPKGTRLSVNIWAIGRDPSLWENPNEFNPDRFLERKNAKIDPRGNDFELIPFGAGRRICAGTRLGILLVEYILGTLVHSFDWELPSSVIELNMDEPFGLALQKAVPLAAM 498          
BLAST of CF835136 vs. ExPASy Swiss-Prot
Match: C71BY_ARATH (Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=CYP71B37 PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 2.759e-27
Identity = 56/118 (47.46%), Postives = 76/118 (64.41%), Query Frame = -3
Query:  196 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 537
            + EI G+T+P   +++VNVW IGRD  TW +P  F+PERF+ SN D KGQNFEL+PFG+GRR+CP + +   M+   L +L+  FDWKL       ++DME+  GL   K   L  VP
Sbjct:  377 EFEINGYTIPAKTRLYVNVWGIGRDPDTWKDPEEFLPERFVNSNIDAKGQNFELLPFGSGRRMCPAMYMGTTMVEFGLANLLYHFDWKLPEGMVVEDIDMEESPGLNASKKNELVLVP 494          
BLAST of CF835136 vs. ExPASy Swiss-Prot
Match: C71B1_THLAR (Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.759e-27
Identity = 54/118 (45.76%), Postives = 79/118 (66.95%), Query Frame = -3
Query:  196 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 537
            D++IAG+ VP+   + VN+WA+    S W +P TF PERF+ +  DFKG NFEL+PFG+GRR+CPG+ + + ++HL L +L+  FDWKL N      + +E+ +GL   K  PL A+P
Sbjct:  373 DLKIAGYDVPEKTWIHVNMWAVHMSPSIWKDPETFNPERFIDNQTDFKGLNFELLPFGSGRRMCPGMGMGLAVVHLTLINLLYRFDWKLPNGMKAEELSIEENYGLICVKKLPLEAIP 490          
BLAST of CF835136 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.603e-27
Identity = 56/118 (47.46%), Postives = 79/118 (66.95%), Query Frame = -3
Query:  196 VEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLG---SNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNHN--MDMEDKFGLTVQKAQPLHAVP 534
            V + G+ +P   ++FVNVWAIGRD + W+NP  F PERF     S  D +GQ++  IPFG+GRR CPG  LA++++H+ L  +I  F WK DN N  +DME+K G+T+ +A P+  VP
Sbjct:  375 VVVCGYEIPAKTRLFVNVWAIGRDPNHWENPFEFRPERFFENGQSQLDVRGQHYHFIPFGSGRRSCPGTSLALQIVHVNLAIMIQCFQWKFDNGNNKVDMEEKSGITLPRAHPIICVP 492          
BLAST of CF835136 vs. ExPASy Swiss-Prot
Match: C75A6_CAMME (Flavonoid 3',5'-hydroxylase OS=Campanula medium GN=CYP75A6 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.369e-26
Identity = 56/116 (48.28%), Postives = 78/116 (67.24%), Query Frame = -3
Query:  199 EIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLG---SNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNH--NMDMEDKFGLTVQKAQPLHAV 531
            E+ GF +PK  ++ VN+WAIGRD   W+NP  F PERFL    +  D +G +FELIPFGAGRRIC G  +    +  +LG+L++SFDWKL +    ++ME+ FG+ +QK  PL A+
Sbjct:  396 EVDGFHIPKNTRLIVNIWAIGRDPKVWENPLDFTPERFLSEKHAKIDPRGNHFELIPFGAGRRICAGARMGAASVEYILGTLVHSFDWKLPDGVVEVNMEESFGIALQKKVPLSAI 511          
BLAST of CF835136 vs. ExPASy Swiss-Prot
Match: C71BW_ARATH (Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=CYP71B35 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.369e-26
Identity = 56/118 (47.46%), Postives = 78/118 (66.10%), Query Frame = -3
Query:  196 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAQPLHAVP 537
            + +I G+T+P   ++ VNVWAIGRD  TW +P  F+PERF+ +N D KGQ+FEL+PFG GRRICP + +   M+   L +L+  FDWKL    +  ++D+E+  GLTV K   L  VP
Sbjct:  376 EFDINGYTIPVKTRLHVNVWAIGRDPDTWKDPEVFLPERFMDNNIDAKGQHFELLPFGGGRRICPAIYMGTTMVEFGLANLLYHFDWKLPEGVEVKDIDVEEAPGLTVNKKNELLLVP 493          
BLAST of CF835136 vs. ExPASy Swiss-Prot
Match: C71BV_ARATH (Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=CYP71B34 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.369e-26
Identity = 57/118 (48.31%), Postives = 76/118 (64.41%), Query Frame = -3
Query:  196 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 537
            + EI G+T+P   ++ VNVWAIGRD  TW +P  F+PERF  +N D KGQ+FEL+PFG GRR+CP + +   M+   L +L+  FDWKL       ++DME+  GLTV K   L  VP
Sbjct:  377 EFEINGYTIPVKTRLHVNVWAIGRDPDTWKDPEVFLPERFTDNNIDAKGQHFELLPFGGGRRMCPAVYMGTTMVEFGLANLLYHFDWKLPEGMKVDDIDMEEAPGLTVNKKNELILVP 494          
BLAST of CF835136 vs. ExPASy Swiss-Prot
Match: C75A7_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A7 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.788e-26
Identity = 57/116 (49.14%), Postives = 82/116 (70.69%), Query Frame = -3
Query:  199 EIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFL---GSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNH--NMDMEDKFGLTVQKAQPLHAV 531
            E+ G  +PKG ++ VN+WAIGRD S W+NP+ F P+RFL    +  D +G +FELIPFGAGRRIC G  L I ++  +LG+L++SF W+L +    ++M++ FGL +QKA PL A+
Sbjct:  383 EVNGHYIPKGTRLSVNIWAIGRDPSVWENPNEFNPDRFLERKNAKIDPRGNDFELIPFGAGRRICAGTRLGILLVEYILGTLVHSFVWELPSSVIELNMDESFGLALQKAVPLAAM 498          
BLAST of CF835136 vs. ExPASy Swiss-Prot
Match: C71BZ_ARATH (Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=CYP71B38 PE=2 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 2.336e-26
Identity = 56/114 (49.12%), Postives = 74/114 (64.91%), Query Frame = -3
Query:  208 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPL 537
            D++I G+ +PK   + +N +AIGRD   W  P  FIPERFL S  D+KGQ+FEL+PFGAGRRICPG+   I M+ L L +L+  FDW L N     ++DME+  G  + K  PL
Sbjct:  378 DIKIQGYNIPKNTMIQINTYAIGRDPKYWKQPGEFIPERFLDSPIDYKGQHFELLPFGAGRRICPGMATGITMVELGLLNLLYFFDWSLPNGMTIEDIDMEEDEGFAIAKKVPL 491          
BLAST of CF835136 vs. ExPASy Swiss-Prot
Match: C71B2_ARATH (Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CYP71B2 PE=2 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 2.336e-26
Identity = 52/117 (44.44%), Postives = 79/117 (67.52%), Query Frame = -3
Query:  196 VEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 534
            ++I G+ +P   Q+ +NVW IGRD   W++P  F PERF  S+ DF+GQ+F+L+PFG+GRRICPG+P+AI  + L L +L+  FDW + +     ++DME+   +++ K  PL  VP
Sbjct:  382 IKIQGYDIPPKTQIQLNVWTIGRDPKRWNDPEEFNPERFANSSVDFRGQHFDLLPFGSGRRICPGMPMAIASVELALMNLLYYFDWSMPDGTKGEDIDMEEAGNISIVKKIPLQLVP 498          
The following BLAST results are available for this feature:
BLAST of CF835136 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
C75A5_EUSGR2.759e-2750.00Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C71BY_ARATH2.759e-2747.46Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=C... [more]
C71B1_THLAR2.759e-2745.76Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1... [more]
C93A2_SOYBN3.603e-2747.46Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]
C75A6_CAMME1.369e-2648.28Flavonoid 3',5'-hydroxylase OS=Campanula medium GN... [more]
C71BW_ARATH1.369e-2647.46Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=C... [more]
C71BV_ARATH1.369e-2648.31Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=C... [more]
C75A7_EUSGR1.788e-2649.14Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C71BZ_ARATH2.336e-2649.12Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=C... [more]
C71B2_ARATH2.336e-2644.44Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CY... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_06L18_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06L18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835136 ID=CF835136; Name=CF835136; organism=Citrus sinensis; type=EST; length=596bp
TAAATCGCATGACTTTATAGTCCACTTGAAGATTAACTCTGTTAAGTTGC
GTGTCTACATAAAACCAAATAAGAGCGCCCACACCTGAGAATGATTACAC
ACACATATAACTAACCACCAAGCGCTTTATATAGTGGCTACCACCAAGCG
CTTTATATATTGGCTACGAACTATAGTATAGAACTAGATGGCACCAGGGA
CAGCATGAAGGGGTTGAGCCTTCTGTACGGTGAGGCCAAATTTATCTTCC
ATGTCCATGTTGTGGTTATCAAGCTTCCAATCAAAAGAGTTAATAAGTGA
ACCCAACATTAGATGTAACATTCTGATTGCCAATGGTAAACCAGGACAAA
TTCGTCGTCCAGCTCCGAAGGGAATTAGCTCAAAATTCTGGCCTTTGAAA
TCAGCATTTGACCCTAAGAACCTTTCGGGAATAAAAGTGTGAGGGTTGTC
CCATGTGCTTTCATCTCTGCCAATAGCCCATACATTGACAAAAACTTGTG
CACCTTTTGGCACTGTGAAGCCTGCAATTTCAACATCTTTTGTGGCTTTG
CGGGGAAGTAATAAGGGAGCTGCAGGGTGCAATCTCAAAGTTTCTT
back to top