CF835136

Overview
NameCF835136
Unique NameCF835136
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length596
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11430 contig Csv1_Contig11430:1415..2009. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835136 vs. ExPASy Swiss-Prot
Match: C71DB_LOTJA (Cytochrome P450 71D11 (Fragment) OS=Lotus japonicus GN=CYP71D11 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.360e-24
Identity = 52/116 (44.83%), Postives = 73/116 (62.93%), Query Frame = -3
Query:  196 EIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAQPLHAVP 531
            EI G+ +P  + V VN +AIG D   W  P  F PERF+ S+ D+KG NFE +PFGAGRRICPG+   +  + L+L  L+  FDW L     N ++D+ ++FG+TV K + L  +P
Sbjct:  366 EINGYHIPAKSTVLVNTFAIGTDSKYWAEPERFCPERFIDSSIDYKGTNFEHLPFGAGRRICPGINYGMANVELVLALLLYHFDWTLPKGIKNEDLDLTEEFGVTVSKKEDLCLIP 481          
BLAST of CF835136 vs. ExPASy Swiss-Prot
Match: C71BX_ARATH (Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=CYP71B36 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 8.307e-24
Identity = 49/118 (41.53%), Postives = 75/118 (63.56%), Query Frame = -3
Query:  196 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLD----NHNMDMEDKFGLTVQKAQPLHAVP 537
            + E+  + +P   +++VNVWAIGRD  TW +P  F+PERF+ S+ D KGQ+FEL+PFG+GRR+CP + +   M+   L +++  FDWK+       ++D+E+  GL   K   L  VP
Sbjct:  377 EFELNDYVIPVKTRLYVNVWAIGRDPDTWKDPEEFLPERFVNSSIDAKGQHFELLPFGSGRRMCPAMYMGTTMVEFGLANMLYHFDWKIPVGMVAEDIDLEESPGLNASKKNELVLVP 494          
BLAST of CF835136 vs. ExPASy Swiss-Prot
Match: C71BP_ARATH (Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=CYP71B25 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 8.307e-24
Identity = 49/116 (42.24%), Postives = 74/116 (63.79%), Query Frame = -3
Query:  196 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL--DNHNMDMEDKFGLTVQKAQPLHAVP 537
            D++I G+ +P+   + V+ W++GRD   W NP  F PERF+    D+KG +FE +PFG+GRR CPG+  AI  + L L +L+  FDWKL  +  +M+ME+   +T+ K  PL  +P
Sbjct:  382 DIKIQGYDIPRKTLLLVSAWSLGRDPKYWKNPEEFNPERFIDCPVDYKGHSFEFLPFGSGRRFCPGMASAIATIELTLLNLLYFFDWKLPEEMKDMNMEESGDVTIVKKVPLELLP 497          
BLAST of CF835136 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.085e-23
Identity = 53/116 (45.69%), Postives = 76/116 (65.52%), Query Frame = -3
Query:  196 IAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFL--GSN-ADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL--DNHNMDMEDKFGLTVQKAQPLHAVP 528
            + G+ +P   ++FVNVWAIGRD + W+ P  F PERF+  G N  D +GQ++  IPFG+GRR CPG  LA +++ + L  +I  F WKL   N  +DME+K G+T+ +A P+  VP
Sbjct:  384 VCGYDIPAKTRLFVNVWAIGRDPNHWEKPFEFRPERFIRDGQNQLDVRGQHYHFIPFGSGRRTCPGASLAWQVVPVNLAIIIQCFQWKLVGGNGKVDMEEKSGITLPRANPIICVP 499          
BLAST of CF835136 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.417e-23
Identity = 55/119 (46.22%), Postives = 75/119 (63.03%), Query Frame = -3
Query:  196 DVEIAGFTVPKGAQVFVNVWAIGRDESTWD-NPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 537
            D +IAG+ +P G  V VN WA+ RDE  W  NP  F PERFL    DFKG ++E IPFG+GRR+CPG+ L   ML +   +L+ SF++KL N     +++M+   GL + K+Q L  VP
Sbjct:  378 DTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLSFNFKLPNGMKPDDINMDVMTGLAMHKSQHLKLVP 496          
BLAST of CF835136 vs. ExPASy Swiss-Prot
Match: C71AM_ARATH (Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=CYP71A22 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.417e-23
Identity = 48/118 (40.68%), Postives = 76/118 (64.41%), Query Frame = -3
Query:  199 DVEIAGFTVPKGAQVFVNVWAIGRDESTWD-NPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNHNMD----MEDKFGLTVQKAQPLHAV 537
            DV +  + +P G QV +N WAIGR+ +TW  +   F PER L S+ DF+G NFELIPFGAGRRICP +  A+ ++ + L +L++ +DW+L    ++    + +  G+ + +  PL+A+
Sbjct:  368 DVRLGDYHIPAGTQVMINAWAIGREAATWGPDAEKFRPERHLNSSVDFRGHNFELIPFGAGRRICPAISFAVILIEVTLANLVHRYDWRLPEEYIEDQTNVAESTGMVIHRLFPLYAI 485          
BLAST of CF835136 vs. ExPASy Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.417e-23
Identity = 53/118 (44.92%), Postives = 74/118 (62.71%), Query Frame = -3
Query:  199 DVEIAGFT-VPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAV 537
            DV + G+  +P   Q  +N WAIGRD  +W+NP  + PERFL S+AD KG NF+L+PFGAGRR CPG   AI ++ L L  L++ FD+ L       ++DM +  G+T ++  PL  V
Sbjct:  384 DVNLLGYYHIPARTQAIINAWAIGRDPLSWENPEEYQPERFLNSDADVKGLNFKLLPFGAGRRGCPGSSFAIAVIELALARLVHKFDFALPEGIKPEDLDMTETIGITTRRKLPLLVV 501          
BLAST of CF835136 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.851e-23
Identity = 51/126 (40.48%), Postives = 77/126 (61.11%), Query Frame = -3
Query:  190 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNAD----FKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNHNMD------MEDKFGLTVQKAQPLHAVPGA 537
            D +I G+ +P   +V VN WAIGRD + W+ P  F+PERF+    D    + GQ+F  +PFG+GRRICPG    +  + +ML +L+  FDW++ N   D      M++KFGL +++ + L+ VP A
Sbjct:  408 DCQIDGYHIPANPRVLVNGWAIGRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFGLATMEIMLANLMYHFDWEVPNEKEDGCWKVSMDEKFGLMLRRNELLYLVPRA 533          
BLAST of CF835136 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.417e-23
Identity = 50/117 (42.74%), Postives = 71/117 (60.68%), Query Frame = -3
Query:  199 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWK----LDNHNMDMEDKFGLTVQKAQPLHAV 537
            +V++ G+ +PKG+ V VNVWA+ RD + W +P  F PERFL  + D KG +F L+PFG+GRR+CPG  L I +   MLG L++ F W     +    +DM +  GL      P+ AV
Sbjct:  376 NVKVGGYDIPKGSNVHVNVWAVARDPAVWKDPLEFRPERFLEEDVDMKGHDFRLLPFGSGRRVCPGAQLGINLAASMLGHLLHHFCWTPPEGMKPEEIDMGENPGLVTYMRTPIQAV 492          
BLAST of CF835136 vs. ExPASy Swiss-Prot
Match: C71DD_MENPI (Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D13 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 4.123e-23
Identity = 52/118 (44.07%), Postives = 73/118 (61.86%), Query Frame = -3
Query:  196 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAQPLHAVP 537
            + E+ G+T+P  A++ +NVW++GR+   W+ P TF PERF   + DF G +FE IPFGAGRRICPGL   +  + + L  L+  FDWKL    +  +MDM +  GLT  +   L  VP
Sbjct:  376 ECEVNGYTIPNKARIMINVWSMGRNPLYWEKPETFWPERFDQVSRDFMGNDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMNPSDMDMSEAEGLTGIRKNNLLLVP 493          
The following BLAST results are available for this feature:
BLAST of CF835136 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
C71DB_LOTJA6.360e-2444.83Cytochrome P450 71D11 (Fragment) OS=Lotus japonicu... [more]
C71BX_ARATH8.307e-2441.53Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=C... [more]
C71BP_ARATH8.307e-2442.24Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=C... [more]
C93A1_SOYBN1.085e-2345.69Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]
C83A1_ARATH1.417e-2346.22Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
C71AM_ARATH1.417e-2340.68Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=C... [more]
C71A2_SOLME1.417e-2344.92Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71... [more]
C71C3_MAIZE1.851e-2340.48Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]
C98A2_SOYBN2.417e-2342.74Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
C71DD_MENPI4.123e-2344.07Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06L18_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06L18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835136 ID=CF835136; Name=CF835136; organism=Citrus sinensis; type=EST; length=596bp
TAAATCGCATGACTTTATAGTCCACTTGAAGATTAACTCTGTTAAGTTGC
GTGTCTACATAAAACCAAATAAGAGCGCCCACACCTGAGAATGATTACAC
ACACATATAACTAACCACCAAGCGCTTTATATAGTGGCTACCACCAAGCG
CTTTATATATTGGCTACGAACTATAGTATAGAACTAGATGGCACCAGGGA
CAGCATGAAGGGGTTGAGCCTTCTGTACGGTGAGGCCAAATTTATCTTCC
ATGTCCATGTTGTGGTTATCAAGCTTCCAATCAAAAGAGTTAATAAGTGA
ACCCAACATTAGATGTAACATTCTGATTGCCAATGGTAAACCAGGACAAA
TTCGTCGTCCAGCTCCGAAGGGAATTAGCTCAAAATTCTGGCCTTTGAAA
TCAGCATTTGACCCTAAGAACCTTTCGGGAATAAAAGTGTGAGGGTTGTC
CCATGTGCTTTCATCTCTGCCAATAGCCCATACATTGACAAAAACTTGTG
CACCTTTTGGCACTGTGAAGCCTGCAATTTCAACATCTTTTGTGGCTTTG
CGGGGAAGTAATAAGGGAGCTGCAGGGTGCAATCTCAAAGTTTCTT
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