CF835140
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.589e-27 Identity = 82/250 (32.80%), Postives = 127/250 (50.80%), Query Frame = 1 Query: 37 RPLLSGIVTNQQTCFDELV--DSKSGIAAVLYEPLSNVTRLYSVSLGLVTHALDRNLXXXXXXXXXXXXWFLKNTNRFREPLE--TLIKDIRKAPCHDCH-------KGERNLGEVESNGILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRC 753 + L+S +TNQ+TC D D+ + L + +V + S +L ++ + D ++ N + +E + T+ DI A D G+R L ++ +G+ + +V GT F T+ A+A +P NS + K KKN++ +GDG RT+ITG+ +V+DG TTF+S+T A GERF+A D+TF+NTAGP+KHQAVALR +D S+FY C Sbjct: 165 KTLISSAITNQETCLDGFSHDDADKQVRKALLKGQIHVEHMCSNALAMIKNMTDTDIANFEQKAK-----ITSNNRKLKEENQETTVAVDIAGAGELDSEGWPTWLSAGDRRL--LQGSGVKADATVAADGSGT--FKTVAAAVAAAPENSNKR---YVIHIKAGVYRENVEVAKKKKNIMFMGDGRTRTIITGSRNVVDGSTTFHSATVAAVGERFLARDITFQNTAGPSKHQAVALRVGSDFSAFYNC 402
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME_ACTDE (Pectinesterase OS=Actinidia deliciosa PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.416e-27 Identity = 63/128 (49.22%), Postives = 82/128 (64.06%), Query Frame = 1 Query: 382 VIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765 V+V+ G+ NFTT+G A+A + ++S F K K NL+ IGDGI +T I GN SV+DGWTTF SST AV G F+A ++F+N AGP+KHQAVALR+ AD S+FY+CSF G Sbjct: 10 VVVAKDGSGNFTTVGAAVAAAKDSSTAR---FVIYIKEGAYFEYVDVDKKKTNLMFIGDGIGKTWIKGNRSVVDGWTTFRSSTVAVVGTGFIARGISFENYAGPSKHQAVALRSGADFSAFYQCSFVG 134
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.532e-27 Identity = 83/241 (34.44%), Postives = 124/241 (51.45%), Query Frame = 1 Query: 37 RPLLSGIVTNQQTCFDELV--DSKSGIAAVLYEPLSNVTRLYSVSLGLVTHALDRNLXXXXXXXXXXXXWFLKNTNRFREPLETLIKDIRKAPCHDCHKGERNLGEVESNGILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRC 753 + L+S +TNQ TC D D+ + L + +V ++ S +L ++ + D ++ ++ +N + ET D A G+R L + S V +V+V+ G+ NF T+ ++A +P Y KHK N++ IGDG RT+ITG+ +V+DG TTF S+T AV GE F+A D+TF+NTAGP+KHQAVALR ADLS+FY C Sbjct: 176 KTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMM------------IMRTSNNRKLIEETSTVDGWPAWLST---GDRRLLQSSS----VTPNVVVAADGSGNFKTVAASVAAAPQGGTKR--YIIRIKAGVYRENVEVTKKHK-NIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNC 394
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.532e-27 Identity = 83/241 (34.44%), Postives = 123/241 (51.04%), Query Frame = 1 Query: 37 RPLLSGIVTNQQTCFDELV--DSKSGIAAVLYEPLSNVTRLYSVSLGLVTHALDRNLXXXXXXXXXXXXWFLKNTNRFREPLETLIKDIRKAPCHDCHKGERNLGEVESNGILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRC 753 + L+S +TNQ TC D D+ + L + +V ++ S +L ++ + D ++ ++ +N + ET D A G+R L + S V + +V+ G+ NF T+ A+A +P Y KHK N++ IGDG RT+ITG+ +V+DG TTF S+T AV GE F+A D+TF+NTAGP+KHQAVALR ADLS+FY C Sbjct: 176 KTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMM------------IMRTSNNRKLTEETSTVDGWPAWLSP---GDRRLLQSSS----VTPNAVVAADGSGNFKTVAAAVAAAPQGGTKR--YIIRIKAGVYRENVEVTKKHK-NIMFIGDGRTRTIITGSRNVVDGSTTFKSATAAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNC 394
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 8.328e-26 Identity = 78/242 (32.23%), Postives = 122/242 (50.41%), Query Frame = 1 Query: 37 RPLLSGIVTNQQTCFDELV--DSKSGIAAVLYEPLSNVTRLYSVSLGLVTHALDRNLXXXXXXXXXXXXWFLKNTNRFREPLETLIKDIRKAPCHD-CHKGERNLGEVESNGILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRC 753 + L+S +TNQ TC D D+ + L + +V + S +L ++ + + ++ F N NR L+ + D+ G+R L + G + V+ G+ +FTT+ A+A +P S F K K N++ +GDG +T+ITG+ +V+DG TTF+S+T A GERF+A D+TF+NTAGP+KHQAVALR +D S+FY+C Sbjct: 168 KTLISSAITNQGTCLDGFSYDDADRKVRKALLKGQVHVEHMCSNALAMIKNMTETDIANFELRDKSST--FTNNNNR---KLKEVTGDLDSDGWPKWLSVGDRRLLQ----GSTIKADATVADDGSGDFTTVAAAVAAAPEKSNKR---FVIHIKAGVYRENVEVTKKKTNIMFLGDGRGKTIITGSRNVVDGSTTFHSATVAAVGERFLARDITFQNTAGPSKHQAVALRVGSDFSAFYQC 397
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME18_ARATH (Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana GN=PME18 PE=1 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 1.420e-25 Identity = 78/249 (31.33%), Postives = 117/249 (46.99%), Query Frame = 1 Query: 16 MNSWTESRPLLSGIVTNQQTCFDELVDSKSGIAAVLYEPLSNVTRLYSVSLGLVTHALDRNLXXXXXXXXXXXXWFLKNTNRFREPLETLIKDIRKAPCHDCHKGERNLGEVESNGILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFE 762 + S++ LS ++TN TC + + D ++ L ++ V+L + L +NRF L L +R L E + V +V+V+ GT F T+ +A+A +P NS + K KKNL+L+GDG + T+ITG+ +VIDG TTF S+T A +G+ F+A D+ F+NTAGPAKHQAVALR +AD + RC + Sbjct: 151 LESYSNVHTWLSSVLTNYMTCLESISDVSVNSKQIVKPQLEDLVSRARVALAIFVSVLPARDDLKMII-----------SNRFPSWLTAL---------------DRKLLESSPKTLKVTANVVVAKDGTGKFKTVNEAVAAAPENSNTR---YVIYVKKGVYKETIDIGKKKKNLMLVGDGKDATIITGSLNVIDGSTTFRSATVAANGDGFMAQDIWFQNTAGPAKHQAVALRVSADQTVINRCRID 370
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME36_ARATH (Probable pectinesterase/pectinesterase inhibitor 36 OS=Arabidopsis thaliana GN=PME36 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.423e-25 Identity = 80/260 (30.77%), Postives = 118/260 (45.38%), Query Frame = 1 Query: 37 RPLLSGIVTNQQTCFDELVDSKSGIAAVLYEPLSNVTRLYSVSLGLVTHALDRNLXXXXXXXXXXXXWFLKNTNRFREPLE---------TLIKDIRKAPCHDCHKGERNLGEVESNGILV--------NQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765 R LSG++ N TC D L+ + G +++ SNVT + +L ++ K+ ++ L T K P H + NG ++ +V+ G+ TI A+A K +H KN++L+GDG++RT++T N +V DG TT+ S+TF VSG+ F A D+TF+NTAGP KHQAVALR ++DLS FYRCSF+G Sbjct: 99 RTWLSGVLANHHTCLDGLIQQRQGHKPLVH---SNVTFVLHEALA----------------------FYKKSRGHMKKRLHGPARQGHGPTRPKHRPTRPNHGPGRSHHGPSRPNQNGGMLVSWNPTSSRADFVVARDGSATHRTINQALAAVSRMGKSRLNRVIIYIKAGVYNEKIEIDRHMKNIMLVGDGMDRTIVTNNRNVPDGSTTYGSATFGVSGDGFWARDITFENTAGPHKHQAVALRVSSDLSLFYRCSFKG 333
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME39_ARATH (Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana GN=PME39 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.398e-25 Identity = 59/131 (45.04%), Postives = 80/131 (61.07%), Query Frame = 1 Query: 373 NQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765 N ++ V+ GT NFTTI DA+ +PN S+ F PK K ++ IGDGI +TVI N S IDGW+TF + T V G+ ++A D++F N+AGPAK QAVA R+ +D S+FYRC F+G Sbjct: 219 NYNLSVAIDGTGNFTTINDAVFAAPNMSETR---FIIYIKGGEYFENVELPKKKTMIMFIGDGIGKTVIKANRSRIDGWSTFQTPTVGVKGKGYIAKDISFVNSAGPAKAQAVAFRSGSDHSAFYRCEFDG 346
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME_DAUCA (Pectinesterase OS=Daucus carota PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.795e-24 Identity = 57/128 (44.53%), Postives = 81/128 (63.28%), Query Frame = 1 Query: 370 VNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRC 753 V +V+V+ G+ ++ T+ +A+A +P +SK + PK KKN++ +GDG T+IT + +V DG TTFNS+T A G F+A D+TF+NTAG AKHQAVALR +DLS+FYRC Sbjct: 5 VTPNVVVAADGSGDYKTVSEAVAAAPEDSKTR---YVIRIKAGVYRENVDVPKKKKNIMFLGDGRTSTIITASKNVQDGSTTFNSATVAAVGAGFLARDITFQNTAGAAKHQAVALRVGSDLSAFYRC 129
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME6_ARATH (Probable pectinesterase/pectinesterase inhibitor 6 OS=Arabidopsis thaliana GN=PME6 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.868e-23 Identity = 50/80 (62.50%), Postives = 65/80 (81.25%), Query Frame = 1 Query: 526 KHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765 K KN+++IGDGI+ T++TGN +V DG TTF S+TFAVSG F+A +TF+NTAGP KHQAVALR+++D S FY CSF+G Sbjct: 298 KSIKNVMVIGDGIDSTIVTGNRNVQDGTTTFRSATFAVSGNGFIAQGITFENTAGPEKHQAVALRSSSDFSVFYACSFKG 377 The following BLAST results are available for this feature:
BLAST of CF835140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835140 ID=CF835140; Name=CF835140; organism=Citrus sinensis; type=EST; length=765bpback to top |