CF835140
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.065e-20 Identity = 74/244 (30.33%), Postives = 113/244 (46.31%), Query Frame = 1 Query: 46 LSGIVTNQQTCFDELVDSKS----GIAAVLYEPLSNVTRLYSVSLGLVTHALDRNLXXXXXXXXXXXXWFLKNTNRFREPLETLIKDIRKAPCHDCHKGERNLGEVESNGILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765 LS +T+Q TC D + + S G + + N T S SL +VT L +RF P+ + + P ER L E ++N +V+ G+ F TIG+A+ S+ F K+ N+++ GDG ++T + G+ + +DG TF ++TFAV G+ F+A D+ F N AG +KHQAVALR+ +D S F+RCSF+G Sbjct: 182 LSAALTDQDTCLDAVGELNSTAARGALQEIETAMRNSTEFASNSLAIVTKILGL-------------------LSRFETPIHH--RRLLGFP-EWLGAAERRLLEEKNNDS--TPDAVVAKDGSGQFKTIGEALKLVKKKSEER---FSVYVKEGRYVENIDLDKNTWNVMIYGDGKDKTFVVGSRNFMDGTPTFETATFAVKGKGFIAKDIGFVNNAGASKHQAVALRSGSDRSVFFRCSFDG 398
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME1_SOLLC (Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9 PE=1 SV=5) HSP 1 Score: 98.9821 bits (245), Expect = 3.065e-20 Identity = 52/138 (37.68%), Postives = 81/138 (58.70%), Query Frame = 1 Query: 349 VESNGILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFE 762 +ES+G + + +V+ GT ++ T+ +A+A +P+ SK + +K NL+++GDG+ T ITG+ +V+DG TTF S+T A G+ F+ D+ +NTAGPAK QAVALR AD+S RC + Sbjct: 223 MESSGKDIIANAVVAQDGTGDYQTLAEAVAAAPDKSKTR---YVIYVKRGTYKENVEVASNKMNLMIVGDGMYATTITGSLNVVDGSTTFRSATLAAVGQGFILQDICIQNTAGPAKDQAVALRVGADMSVINRCRID 357
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME38_ARATH (Putative pectinesterase/pectinesterase inhibitor 38 OS=Arabidopsis thaliana GN=PME38 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.003e-20 Identity = 51/128 (39.84%), Postives = 75/128 (58.59%), Query Frame = 1 Query: 382 VIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765 V+V+ G+ ++ TI +A+ + K Y K N+++ GDGI +T+ITG+ S G++T+ S+TF G+ FV D+T +NTAGP HQAVALR+N+D+S FYRCS EG Sbjct: 165 VVVAQDGSGDYKTIQEAVNGAGERLKGSPRYVIHVKQGVYEEYVNVGIK-SNNIMITGDGIGKTIITGDKSKGRGFSTYKSATFVAEGDGFVGRDITIRNTAGPENHQAVALRSNSDMSVFYRCSIEG 291
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME17_ARATH (Probable pectinesterase/pectinesterase inhibitor 17 OS=Arabidopsis thaliana GN=PME17 PE=2 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 6.828e-20 Identity = 56/128 (43.75%), Postives = 77/128 (60.16%), Query Frame = 1 Query: 379 SVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFE 762 + +V+ G+ NF TI +AI ++ G F KKN++L GDGI +T+ITG+ SV G TTFNS+T A G+ F+A +TF+NTAG + QAVALR+ +DLS FY+CSFE Sbjct: 206 NAVVAKDGSGNFKTIKEAI-----DAASGSGRFVIYVKQGVYSENLEI--RKKNVMLRGDGIGKTIITGSKSVGGGTTTFNSATVAAVGDGFIARGITFRNTAGASNEQAVALRSGSDLSVFYQCSFE 326
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.521e-19 Identity = 53/132 (40.15%), Postives = 73/132 (55.30%), Query Frame = 1 Query: 370 VNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765 + + VS G+ F TI +AI +P +S + + K NL+ IGDG +TVITG S+ D TTF+++TFA +G F+ D+TF+N AGPAKHQAVALR D + YRC+ G Sbjct: 270 IQADITVSKDGSGTFKTIAEAIKKAPEHSSRR--FVIYVKAGRYEEENLKVGRKKTNLMFIGDGKGKTVITGGKSIADDLTTFHTATFAATGAGFIVRDMTFENYAGPAKHQAVALRVGGDHAVVYRCNIIG 399
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.521e-19 Identity = 72/243 (29.63%), Postives = 108/243 (44.44%), Query Frame = 1 Query: 46 LSGIVTNQQTC---FDELVDSKSGIAAVLYEPLSNVTRLYSVSLGLVTHALDRNLXXXXXXXXXXXXWFLKNTNRFREPLETLIKDIRKAPCHDCHKGERNLGEVESNGILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765 LS +TN TC FD + D G+ + L N++ L S L + + + D + + +F + ++I + P + +IVS G TI +AI +P NS + K NL+ +GDG +TVI+G S+ D TTF++++FA +G F+A D+TF+N AGPAKHQAVALR AD + YRC+ G Sbjct: 189 LSAALTNHDTCTEGFDGVDDG--GVKDHMTAALQNLSELVSNCLAIFSASHDGDDFAGVPIQNRRLLGVEEREEKFPRWMRPKEREILEMPVSQ-----------------IQADIIVSKDGNGTCKTISEAIKKAPQNSTRR--IIIYVKAGRYEENNLKVGRKKINLMFVGDGKGKTVISGGKSIFDNITTFHTASFAATGAGFIARDITFENWAGPAKHQAVALRIGADHAVIYRCNIIG 410
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME42_ARATH (Probable pectinesterase/pectinesterase inhibitor 42 OS=Arabidopsis thaliana GN=PME42 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.389e-19 Identity = 76/251 (30.28%), Postives = 116/251 (46.22%), Query Frame = 1 Query: 16 MNSWTESRPLLSGIVTNQQTCFDELVDSKSGIAAVLYEP-LSNVTRLYSVSLGLVTHALDRNLXXXXXXXXXXXXWFLKNTNRFREPLETLIKDIRKAPCHDCHKGERNLGEVESNGILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765 + S+ LSG++T+ TC DE+ D G EP L ++ V+L L F+ + R L +++ + +P H +++L + + + V+V+ GT + T+ AIA +P +S F K NL LIGDG + T+ITGN S + TF ++TFA +G+ F+ VD+ F+NT GPAK AVALR + D+S YRC EG Sbjct: 122 LGSYENIHTWLSGVLTSYITCIDEIGD---GAYKRRVEPQLQDLISKAKVALAL----------------------FISISPRDNTELNSVVPN---SPSWLSHVDKKDL-YLNAEALKKIADVVVAKDGTGKYNTVNAAIAAAPQHSHKR---FIIYIKTGIYDEIVAIENTKPNLTLIGDGQDSTIITGNLSASNVRRTFYTATFASNGKGFIGVDMCFRNTVGPAKGPAVALRVSGDMSVIYRCRVEG 340
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME26_ARATH (Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.389e-19 Identity = 74/242 (30.58%), Postives = 111/242 (45.87%), Query Frame = 1 Query: 46 LSGIVTNQQTCFDELVDSK--SGIAAVLYEPLSNVTRLYSVSLGLVTHALDRNLXXXXXXXXXXXXWFLKNTNRFREPLETLIKDIRKAPCHDCHKGERNLGEVESNGILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765 LS VT+ TC D L + S I L + N T S SL +V L + L N+N F + ++ + +A +NL V V+ G+ + T+ +A+ P K F K K N+ + GDG ++T+I+G+ +++DG TFN+STFA G+ F+ D+ NTAGP KHQAVA R+++D S +YRCSF+G Sbjct: 570 LSSAVTDIGTCGDTLDEDNYNSPIPQKLKSAMVNSTEFTSNSLAIVAQVLKKPSKSRIPVQGRR----LLNSNSFPNWVRPGVRRLLQA---------KNL----------TPHVTVAADGSGDVRTVNEAVWRVPKKGKT---MFVIYVKAGTYVENVLMKKDKWNVFIYGDGRDKTIISGSTNMVDGVRTFNTSTFATEGKGFMMKDMGIINTAGPEKHQAVAFRSDSDRSVYYRCSFDG 785
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME16_ARATH (Probable pectinesterase/pectinesterase inhibitor 16 OS=Arabidopsis thaliana GN=PME16 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.781e-19 Identity = 53/132 (40.15%), Postives = 72/132 (54.55%), Query Frame = 1 Query: 370 VNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765 +N +V+P G+ TIG+A+ + S G P +KN++L+GDG +TVI G+ S GWTT+ ++T A GE F+A D+TF N AGP QAVALR AD S +RCS EG Sbjct: 210 LNVDAVVAPDGSGTHKTIGEALLSTSLASS--GGRTKIYLKAGTYHENINIPTKQKNVMLVGDGKGKTVIVGSRSNRGGWTTYKTATVAAMGEGFIARDMTFVNNAGPKSEQAVALRVGADKSVVHRCSVEG 339
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME_MEDSA (Pectinesterase/pectinesterase inhibitor OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.288e-18 Identity = 72/243 (29.63%), Postives = 112/243 (46.09%), Query Frame = 1 Query: 46 LSGIVTNQQTCFDELVDSKSGIAAVLYEPLSNVTRLYSVSLGLVTHALDRNLXXXXXXXXXXXXWFLK--NTNRFREPLETLIKDIRKAPCHDCHKGERNLGEVESNGILVNQSVIVSPHGTDNFTTIGDAI-AFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765 L+G +++QQTC D G A + +T++ S+ L ++A+D LK +T+++ L D + +D H+ G V+ N + V+ G+ F T+ DA+ P N+ P F K + +IGDG +T TG+ + DG T+N++TF V+G F+A D+ F+NTAG KHQAVALR AD + FY C +G Sbjct: 41 LTGTLSHQQTCLD-------GFANTTTKAGETMTKVLKTSMELSSNAIDM---------MDAVSRILKGFDTSQYSVSRRLLSDDGIPSWVNDGHRRLLAGGNVQPNAV-------VAQDGSGQFKTLTDALKTVPPKNAVP----FVIHVKAGVYKETVNVAKEMNYVTVIGDGPTKTKFTGSLNYADGINTYNTATFGVNGANFMAKDIGFENTAGTGKHQAVALRVTADQAIFYNCQMDG 256 The following BLAST results are available for this feature:
BLAST of CF835140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835140 ID=CF835140; Name=CF835140; organism=Citrus sinensis; type=EST; length=765bpback to top |